Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042613_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:173685114:173686104:-1 gene:Zm00001d042613 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 43 description:RING/FYVE/PHD-type zinc finger family protein
Sequence

ATGGACCCCTCTGAACTTCCGGAGCTGTCCCGTACTGCTATGTTGATCTGCTGCAAGGTG
TGTGGAGGACCTGAAGAGGTGGACAAGAGGTTCCTGATCTGTGACCACTATCTTTGCCTG
TACAAGTACTACCACATTAGTTGCCTGACTACCGAGCAGATTGCAAGTGATGTGCAGATG
GGCAGCCAGCGCTGGTACTGTCCATCTTGCCTCTGCCGTGTCTGCCTGTGCGACACGGAC
GATGACCAGATCATCCTGTGTGACTGCTGCGATCAGGGCTATCATCTCTACTGCCTCAGT
CCTCCAAGAAGAAAGGTGCCCAAGGGGCATTGGGACTGCGAACCCTGCAAGGAGCGGAGG
GAGAAGGAGAAGAGGATACTGATGCTCCACAGGAAGGATTACGATGAAGACATCCTGAAG
AGTGGCGAGTTCCATGGACCGAACTTGCTGCTTAAGGCCGCGAAAAAGGTGAAGCGCGAT
GAGGAGGTGAAGGTGGCTAAGACTAAGAGCACCAGAAAGTGCAAATTTGCGTTCACCTTT
GGAAATTAG

Peptide Sequence

PEP ID

Zm00001d042613_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:173685114:173686104:-1 gene:Zm00001d042613 transcript:Zm00001d042613_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 43 description:RING/FYVE/PHD-type zinc finger family protein
Sequence

MDPSELPELSRTAMLICCKVCGGPEEVDKRFLICDHYLCLYKYYHISCLTTEQIASDVQM
GSQRWYCPSCLCRVCLCDTDDDQIILCDCCDQGYHLYCLSPPRRKVPKGHWDCEPCKERR
EKEKRILMLHRKDYDEDILKSGEFHGPNLLLKAAKKVKRDEEVKVAKTKSTRKCKFAFTF
GN

Transcript Sequence

Transcript ID

Zm00001d042613_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:173685114:173686104:-1 gene:Zm00001d042613 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 43 description:RING/FYVE/PHD-type zinc finger family protein
Sequence

ATGGACCCCTCTGAACTTCCGGAGCTGTCCCGTACTGCTATGTTGATCTGCTGCAAGGTG
TGTGGAGGACCTGAAGAGGTGGACAAGAGGTTCCTGATCTGTGACCACTATCTTTGCCTG
TACAAGTACTACCACATTAGTTGCCTGACTACCGAGCAGATTGCAAGTGATGTGCAGATG
GGCAGCCAGCGCTGGTACTGTCCATCTTGCCTCTGCCGTGTCTGCCTGTGCGACACGGAC
GATGACCAGATCATCCTGTGTGACTGCTGCGATCAGGGCTATCATCTCTACTGCCTCAGT
CCTCCAAGAAGAAAGGTGCCCAAGGGGCATTGGGACTGCGAACCCTGCAAGGAGCGGAGG
GAGAAGGAGAAGAGGATACTGATGCTCCACAGGAAGGATTACGATGAAGACATCCTGAAG
AGTGGCGAGTTCCATGGACCGAACTTGCTGCTTAAGGCCGCGAAAAAGGTGAAGCGCGAT
GAGGAGGTGAAGGTGGCTAAGACTAAGAGCACCAGAAAGTGCAAATTTGCGTTCACCTTT
GGAAATTAG