Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042584_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:172740091:172743103:-1 gene:Zm00001d042584 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:diphosphocytidyl methyl erythritol synthase1 description: diphosphocytidyl methyl erythritol synthase1
Sequence

ATGGAGCTCCACCTCTGCCTCCGTCTCCACGTGCGCCTCACTCCTGCCGCGAAGCCACCG
CCGGCGCCCGCGGTGCTTCCAGTTCCAGCCTCCCGCCGCCTTCGGATGGGGTGTCGCTGT
CGACGCTGTGAAGGAGAGGAGCGTCTCGGTGATCCTGTTGTCTGGAGGCCAGGGAAAGAG
AATGGGGGCAAGTATGCCAAAGCAGTATCTACCTCTACTGGGACTACCAATTGCATTGCA
CAGGTTACTCTCTCTAGCATAAAAGATTTCGAACTCATCAAGTCAGCAAGGTTATGTTCT
ATTAAGAACTTGCAACTACCTCTTAAATTTGCACGCCCGGGAAAAGAGAGACAGGACTCC
GTTTTTAATGGACTTCAGGAAATTGATGGGGATTCGGAACTAGTTTGTGTCCATGATTCT
GCAAGGCCCTTAGTTTCTTCTGAAGATGTAAAAAAGGTCTTAGAAGATGCTGCAGTACAT
GGAGCAGCTGTTCTTGGTGTGCCTGTTAAAGCTACAATAAAGGAGGCCAATAGTGATTCT
TTTGTCATAAAAACTCTTGACCGGAAAACTCTATGGGAAATGCAAACTCCACAGGTAATC
ATACTATTACCTTTTTCTTTCTCTAGCCGATTTAATTTTTGCCATCGCAGGGATAACCAT
GAAGTCACTGATGATGTATCCATTGTAGAATATCTAAAACACCCTGTCTATATCACGGAA
GGCTCCTATACAAACATTAAGGTCACTACTCCTGAAGACTTGCTACTGGCTGAGCGCCTG
ATGAATGAGAAATAG

Peptide Sequence

PEP ID

Zm00001d042584_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:172740091:172743103:-1 gene:Zm00001d042584 transcript:Zm00001d042584_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:diphosphocytidyl methyl erythritol synthase1 description: diphosphocytidyl methyl erythritol synthase1
Sequence

MELHLCLRLHVRLTPAAKPPPAPAVLPVPASRRLRMGCRCRRCEGEERLGDPVVWRPGKE
NGGKYAKAVSTSTGTTNCIAQVTLSSIKDFELIKSARLCSIKNLQLPLKFARPGKERQDS
VFNGLQEIDGDSELVCVHDSARPLVSSEDVKKVLEDAAVHGAAVLGVPVKATIKEANSDS
FVIKTLDRKTLWEMQTPQVIILLPFSFSSRFNFCHRRDNHEVTDDVSIVEYLKHPVYITE
GSYTNIKVTTPEDLLLAERLMNEK

Transcript Sequence

Transcript ID

Zm00001d042584_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:172740091:172743103:-1 gene:Zm00001d042584 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:diphosphocytidyl methyl erythritol synthase1 description: diphosphocytidyl methyl erythritol synthase1
Sequence

GGCGATACTGCAGTCTCCGCGTCCATTCCGGCCGGGCGTCCAGACGTCCACCCTTTCTCG
CTTCTCAGACCATCGTCACCATCCCTCCCCTCGGCCTCGCGTTCGCAGCGGTCAGCGCCT
CCGAGATGGAGCTCCACCTCTGCCTCCGTCTCCACGTGCGCCTCACTCCTGCCGCGAAGC
CACCGCCGGCGCCCGCGGTGCTTCCAGTTCCAGCCTCCCGCCGCCTTCGGATGGGGTGTC
GCTGTCGACGCTGTGAAGGAGAGGAGCGTCTCGGTGATCCTGTTGTCTGGAGGCCAGGGA
AAGAGAATGGGGGCAAGTATGCCAAAGCAGTATCTACCTCTACTGGGACTACCAATTGCA
TTGCACAGGTTACTCTCTCTAGCATAAAAGATTTCGAACTCATCAAGTCAGCAAGGTTAT
GTTCTATTAAGAACTTGCAACTACCTCTTAAATTTGCACGCCCGGGAAAAGAGAGACAGG
ACTCCGTTTTTAATGGACTTCAGGAAATTGATGGGGATTCGGAACTAGTTTGTGTCCATG
ATTCTGCAAGGCCCTTAGTTTCTTCTGAAGATGTAAAAAAGGTCTTAGAAGATGCTGCAG
TACATGGAGCAGCTGTTCTTGGTGTGCCTGTTAAAGCTACAATAAAGGAGGCCAATAGTG
ATTCTTTTGTCATAAAAACTCTTGACCGGAAAACTCTATGGGAAATGCAAACTCCACAGG
TAATCATACTATTACCTTTTTCTTTCTCTAGCCGATTTAATTTTTGCCATCGCAGGGATA
ACCATGAAGTCACTGATGATGTATCCATTGTAGAATATCTAAAACACCCTGTCTATATCA
CGGAAGGCTCCTATACAAACATTAAGGTCACTACTCCTGAAGACTTGCTACTGGCTGAGC
GCCTGATGAATGAGAAATAGAGCTGACATGCAAAATTAACTGTTTGCTTGATTTTATAGA
CATACGATTTTGTAGCAGTACAGCATTCACCCGCACTTCTACAGGTTTTGAAAACCCTCA
TGCACGAGATAACTGACTGCTTTGTAAACTTTCTGTCATTCTTTCTAGATATATCAATAA
AAAATGGAACAATTGTATAATTGACTTTGCTCACGACTCT