Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042582_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:172732085:172735180:1 gene:Zm00001d042582 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 13 description:PHD finger protein

Sequence

ATGAATGAGAAGGACTGGCTGGCGCTAGTTGCAGTCCACAGTGATTCCTGGTTACTATCT
GTCGCATTCTACTTTGGTGCACGGTTTGGATTTGACAGAGAAGCTAGGAGGCGGCTCTTT
AGCCTGATAAACAACATGCCCACGATATTTGAGGTGGTGACGGGAGCAGTCAAGAAGCAG
CAGGCAAAGGAGAAGACACCTAACAGTAGCAGCAAGAGCAACAAGCCTAGTTCAAAAGTG
TCAAGAGCAGAGTCTCGATCGAAGGCTAAGGTCCCCAAAGACGAAGAAGAGAGCGGTGAC
GACGACGGGGACGAGGAGGCGGAGGAGCACGACAACACCCTGTGTGGAACCTGCGGGACC
AACGACGGCAAGGACCAGTTCTGGATCTGCTGCGATAACTGTGAGAAGTGGTACCATGGG
AAGTGTGTCAAGATCACGCCCGCACGGGCCGAGCATATCAAGCAGTACAAGTGCCCAGAC
TGCACCAACAAGAGGGTCAGGGCGTGA

Peptide Sequence

PEP ID

Zm00001d042582_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:172732085:172735180:1 gene:Zm00001d042582 transcript:Zm00001d042582_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 13 description:PHD finger protein

Sequence

MNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQ
QAKEKTPNSSSKSNKPSSKVSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGT
NDGKDQFWICCDNCEKWYHGKCVKITPARAEHIKQYKCPDCTNKRVRA

Transcript Sequence

Transcript ID

Zm00001d042582_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:172732085:172735180:1 gene:Zm00001d042582 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 13 description:PHD finger protein

Sequence

GGTTACCTTGCCAGCTGAGGAAGTGCCCCCAGAGATCCCTGAACCAGCATTAGGAATCAA
CTTTGCTAGGGATGGCATGAATGAGAAGGACTGGCTGGCGCTAGTTGCAGTCCACAGTGA
TTCCTGGTTACTATCTGTCGCATTCTACTTTGGTGCACGGTTTGGATTTGACAGAGAAGC
TAGGAGGCGGCTCTTTAGCCTGATAAACAACATGCCCACGATATTTGAGGTGGTGACGGG
AGCAGTCAAGAAGCAGCAGGCAAAGGAGAAGACACCTAACAGTAGCAGCAAGAGCAACAA
GCCTAGTTCAAAAGTGTCAAGAGCAGAGTCTCGATCGAAGGCTAAGGTCCCCAAAGACGA
AGAAGAGAGCGGTGACGACGACGGGGACGAGGAGGCGGAGGAGCACGACAACACCCTGTG
TGGAACCTGCGGGACCAACGACGGCAAGGACCAGTTCTGGATCTGCTGCGATAACTGTGA
GAAGTGGTACCATGGGAAGTGTGTCAAGATCACGCCCGCACGGGCCGAGCATATCAAGCA
GTACAAGTGCCCAGACTGCACCAACAAGAGGGTCAGGGCGTGAGCAACCGATGCGACCTT
GCTAGGAAGGAAAGGAAGAAACGACCTCCTTGGCGCCAAGATATGGCTGTCTAATGCGTG
GCATGTCTCATGTGCTGAGTGTTGACATTGCCATGGGCCCCGCCCTCTAGTCTGTAAACG
TTGTCACTGAAGGTACCTCTCGGCTGACCATTTCTCCATTGTTGGTGTTGT