Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042569_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:172229147:172233523:-1 gene:Zm00001d042569 gene_biotype:protein_coding transcript_biotype:protein_coding description:SRP72 RNA-binding domain
Sequence	ATGCCGCCGAAATCGAAGGCGTCCGCCGCCGCGGAGCCGGTGGCCGTCGAGGACCTCTTC GCCTCGCTCCACCGCCACATCGAGGCAGGTGCTTTCAAACAGGCCGCCAAGGTCGCCGAC CAAGGTCAAGCACTCCATCTCCTCCCCCCCAGCGCGGTCCGAGTCTCGTGCCCTAACCCC CGTTCCAATCTGATTCCCACTGGTTCCGCAGTTCTCAAGGCAGCGCCGGGAGATGAGGAC GCGGTGCGATGCAAGGTGGTGGCATACATCAAGGCCGACGAGATCGACAAGGCGCTCGCC GCGATCCGCGCCGCCGAGCGCCTCCCGATCGATCTCAGCTACTACAGGGCCTACTGCTGC TACAGGCAAAACAAACTGCATGAGGCTCTTGAGCTTTTAAGAGGCCAAGAAGAAACTTCA GCTGTTCTCCAGCTGGAATCCCAGATCTTTTACCGACTAGGAAGAATGAATGATTGCATG AGTAGCTATGAGAAGCTTAAAAAATTTAAAATTGACTCAATGGATCTGAAGATAAATATC ATTGCTGCTCTAGTTGCTGCTGGAAGGGCTTCTGAGGTACAGGCAGCTATGAAGGCGCTT AAGGTTGATCTTACCACGAGAGCACTCAGGGATACTCGTAGTTTTGAGCTCGCATACAAT TCTGCTTGCTCCTTGATAGAAAACAAGAAGTACTCTGAAGCCAAGGAGCAATTGGACTTG GCTAAAAGAATTGGGAAAGAAGAGCTTATGGTGGAAGACTACGGCGAGGCGGATATTGAA TATGAATTAGCTCCTGTTTCTGCTCAGCTTGCTTATGTGCAGCAGCTACAAGGACAATCT CAAGAAGCTATGCAAACATATGTTAATATGATAAATGGGCAGTCAGCTGATTTATCATCA CTTGCTGTGGCAACAACAAATCTTATTTCAATAAAAGGTACAAAAGATACCGCAGATAGC TTGAAGAAGCTCGATCGGCTTATTGGAACAACTACAGCTCCAAACCAGTTGCATCTTGTT GAAAACCTTGACTACAAGTTATCCCCATGGCAGAAAGAAGCTCTGTATTCTGCACGTGTT CTTTTACTGCTCCATGCAAATAAAACTGAACAGGCACATGAGTTGGTCAGGGGGCTGCTT GGTATGTTTCCAGATAGTGTATTCCCTGTTTTACTTCAAGCCGCTGTTCATGTTAAAGAA AAGAAGATTCACAAAGCTGAAGATGTTCTTAGCCAGTACGCTGAGAAGCGTCCTGAGAAT TCTAAAGGGCTCCTCCTTGCACTTGCCCAGATTGCTGCTAATGCCAACCATTTTCAGCTT GCTGCTGACTCACTATCCAGAATACCTGACATTCAGCACATGCCTGCAACAGTTGCTACA TTAGTGGCCCTTAAAGAGCGCCTAGGTGACTCCAATGCTGCAGCTTCTGTACTTGATTCT GCTATCAACTGGTGGAAGAATTCCATGACCGAGGATAACAAATTAGATATATTAACACGG GAGGCTGCTGCATTTAAGCTCAGCCATGGACGTGATGAAGAGGCTTGTTTGTTGTATGAG GAACTTGTGAAGAGCCATGGAAGCATAGAAGCTTTGGCTGGGTTAGTAATGACTTCAGCG CGCACTAACTTGGAGAAGGCAGAACAATACGAGAAGAAACTGAAGCCATTGCCAGGCCTC AAAGGAGTTAATGTTGAGAGCTTGGAGAAGACATCTGGTGCAAGGCATGTGGAAGGGCCC CAAGACATGAAGGTAGATGTTCCCGAGGAAGTGAAGAAGCAAAAGGCAAAGAAGAGGAAG CGGAAGCCTAGATACCCGAAAGGCTTCGATCCAGCAAACCCGGGGCCGCCACCAGATCCC GAGAGATGGCTGCCAAGGAGAGAGCGGTCCAGTTACCGTCCAAAGAGGAAGGATAAGAGG GCTCAGGTCAGAGGTGCTCAAGGAGCTGTGTCTAGGGAAACATCGGCCACCAATGTCGGT GCTTCCTCAAAAGGAAGCCAAACCACCAATTCATCAAAGACACCGGCGGTAAATGCTGAA CAGCCAAAAACTAGCAACAAATCTAGGAAGAAGAAGTCCAGGCATTAG

Peptide Sequence

PEP ID	Zm00001d042569_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:172229147:172233523:-1 gene:Zm00001d042569 transcript:Zm00001d042569_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:SRP72 RNA-binding domain
Sequence	MPPKSKASAAAEPVAVEDLFASLHRHIEAGAFKQAAKVADQGQALHLLPPSAVRVSCPNP RSNLIPTGSAVLKAAPGDEDAVRCKVVAYIKADEIDKALAAIRAAERLPIDLSYYRAYCC YRQNKLHEALELLRGQEETSAVLQLESQIFYRLGRMNDCMSSYEKLKKFKIDSMDLKINI IAALVAAGRASEVQAAMKALKVDLTTRALRDTRSFELAYNSACSLIENKKYSEAKEQLDL AKRIGKEELMVEDYGEADIEYELAPVSAQLAYVQQLQGQSQEAMQTYVNMINGQSADLSS LAVATTNLISIKGTKDTADSLKKLDRLIGTTTAPNQLHLVENLDYKLSPWQKEALYSARV LLLLHANKTEQAHELVRGLLGMFPDSVFPVLLQAAVHVKEKKIHKAEDVLSQYAEKRPEN SKGLLLALAQIAANANHFQLAADSLSRIPDIQHMPATVATLVALKERLGDSNAAASVLDS AINWWKNSMTEDNKLDILTREAAAFKLSHGRDEEACLLYEELVKSHGSIEALAGLVMTSA RTNLEKAEQYEKKLKPLPGLKGVNVESLEKTSGARHVEGPQDMKVDVPEEVKKQKAKKRK RKPRYPKGFDPANPGPPPDPERWLPRRERSSYRPKRKDKRAQVRGAQGAVSRETSATNVG ASSKGSQTTNSSKTPAVNAEQPKTSNKSRKKKSRH

Transcript Sequence

Transcript ID	Zm00001d042569_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:172229147:172233523:-1 gene:Zm00001d042569 gene_biotype:protein_coding transcript_biotype:protein_coding description:SRP72 RNA-binding domain
Sequence	GTTGGCAACAAGGCGAACCTATTTTCTTGCAGCGCGTGCTGGGTGCTGCTCTGGTACTCT CTTCTCTCTCCCTGCTGACCCAAGTCCCACGCCTGCGTCTCGTGATGCCGCCGAAATCGA AGGCGTCCGCCGCCGCGGAGCCGGTGGCCGTCGAGGACCTCTTCGCCTCGCTCCACCGCC ACATCGAGGCAGGTGCTTTCAAACAGGCCGCCAAGGTCGCCGACCAAGGTCAAGCACTCC ATCTCCTCCCCCCCAGCGCGGTCCGAGTCTCGTGCCCTAACCCCCGTTCCAATCTGATTC CCACTGGTTCCGCAGTTCTCAAGGCAGCGCCGGGAGATGAGGACGCGGTGCGATGCAAGG TGGTGGCATACATCAAGGCCGACGAGATCGACAAGGCGCTCGCCGCGATCCGCGCCGCCG AGCGCCTCCCGATCGATCTCAGCTACTACAGGGCCTACTGCTGCTACAGGCAAAACAAAC TGCATGAGGCTCTTGAGCTTTTAAGAGGCCAAGAAGAAACTTCAGCTGTTCTCCAGCTGG AATCCCAGATCTTTTACCGACTAGGAAGAATGAATGATTGCATGAGTAGCTATGAGAAGC TTAAAAAATTTAAAATTGACTCAATGGATCTGAAGATAAATATCATTGCTGCTCTAGTTG CTGCTGGAAGGGCTTCTGAGGTACAGGCAGCTATGAAGGCGCTTAAGGTTGATCTTACCA CGAGAGCACTCAGGGATACTCGTAGTTTTGAGCTCGCATACAATTCTGCTTGCTCCTTGA TAGAAAACAAGAAGTACTCTGAAGCCAAGGAGCAATTGGACTTGGCTAAAAGAATTGGGA AAGAAGAGCTTATGGTGGAAGACTACGGCGAGGCGGATATTGAATATGAATTAGCTCCTG TTTCTGCTCAGCTTGCTTATGTGCAGCAGCTACAAGGACAATCTCAAGAAGCTATGCAAA CATATGTTAATATGATAAATGGGCAGTCAGCTGATTTATCATCACTTGCTGTGGCAACAA CAAATCTTATTTCAATAAAAGGTACAAAAGATACCGCAGATAGCTTGAAGAAGCTCGATC GGCTTATTGGAACAACTACAGCTCCAAACCAGTTGCATCTTGTTGAAAACCTTGACTACA AGTTATCCCCATGGCAGAAAGAAGCTCTGTATTCTGCACGTGTTCTTTTACTGCTCCATG CAAATAAAACTGAACAGGCACATGAGTTGGTCAGGGGGCTGCTTGGTATGTTTCCAGATA GTGTATTCCCTGTTTTACTTCAAGCCGCTGTTCATGTTAAAGAAAAGAAGATTCACAAAG CTGAAGATGTTCTTAGCCAGTACGCTGAGAAGCGTCCTGAGAATTCTAAAGGGCTCCTCC TTGCACTTGCCCAGATTGCTGCTAATGCCAACCATTTTCAGCTTGCTGCTGACTCACTAT CCAGAATACCTGACATTCAGCACATGCCTGCAACAGTTGCTACATTAGTGGCCCTTAAAG AGCGCCTAGGTGACTCCAATGCTGCAGCTTCTGTACTTGATTCTGCTATCAACTGGTGGA AGAATTCCATGACCGAGGATAACAAATTAGATATATTAACACGGGAGGCTGCTGCATTTA AGCTCAGCCATGGACGTGATGAAGAGGCTTGTTTGTTGTATGAGGAACTTGTGAAGAGCC ATGGAAGCATAGAAGCTTTGGCTGGGTTAGTAATGACTTCAGCGCGCACTAACTTGGAGA AGGCAGAACAATACGAGAAGAAACTGAAGCCATTGCCAGGCCTCAAAGGAGTTAATGTTG AGAGCTTGGAGAAGACATCTGGTGCAAGGCATGTGGAAGGGCCCCAAGACATGAAGGTAG ATGTTCCCGAGGAAGTGAAGAAGCAAAAGGCAAAGAAGAGGAAGCGGAAGCCTAGATACC CGAAAGGCTTCGATCCAGCAAACCCGGGGCCGCCACCAGATCCCGAGAGATGGCTGCCAA GGAGAGAGCGGTCCAGTTACCGTCCAAAGAGGAAGGATAAGAGGGCTCAGGTCAGAGGTG CTCAAGGAGCTGTGTCTAGGGAAACATCGGCCACCAATGTCGGTGCTTCCTCAAAAGGAA GCCAAACCACCAATTCATCAAAGACACCGGCGGTAAATGCTGAACAGCCAAAAACTAGCA ACAAATCTAGGAAGAAGAAGTCCAGGCATTAGATGAGAATTTTATGTTACATTACCGTAC AAAAGAATATGTTCGTTTATCTTCTGGATGACTTGCAATTTTGGACTGGATTGCATTCAA TTGCAGATTTGCTTTGCTTTTACACTAACGTTTGAAGCGACTGAGACTATTGATTTTTTT TTTGCCAAGATGTGATTGATGGGTTGCTCCAGTAACATTCTATTTTTTATGAGTTAATAG TTCTTTTGATTCCATTCGAGAATATTGGTAACTCTTATTGCTCCTAGCTTCCGCGTTACC TTGCCCTTG