Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042549_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:171514199:171518513:-1 gene:Zm00001d042549 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ and TAZ domain-containing protein 3
Sequence

ATGGAATGCGTGGAGCTGCTGGATTCTCCCGATCTCTTCTTCCTGGACGGCGGCGATGCG
CATGCGACCGACTTCTCACTGGAGAACCATCTCGAGTCAAGTAGCTCGGCAGGTGCCAAA
AACAAAGCTGCGCCGGGTCATAGTCATATTCATAGTCATAGTCATAGCCGGCGTGCTCAG
CTTCATCGGAGTAACGCGCCTGTTCCACCGCCGCTGCCTGGAACCTCTTATTATGGCGCG
CGGAGGAAGGCGAAGGCCGCCTGTCGCCGTGTCCCCGAAGGCGTCCTGGATTCCTGGGAC
AGGTTGTTCTTGGAGGGATACCAGTCTGACCTCCGTGTCTCCACAGACGGCGGCGCTGAG
ATTTCGTCGCATTCCTGCGTTCTCGGCGTCAAATCCCCTGTCCTGAGAGCTATGCTGGAG
GAAGCTAGACTGAGAGATGGGTTTCGGTGTATCCGTGTCTCTGGCGCGCCTTCGGAAGCA
GTCCGTGTCTTCATCAGATTTCTCTACTCTTCACGGTTTGAGCAGGAACAGATGAAGGAG
CACGCTCTGCATTTGCTTGTGCTCTCCCACGTCTTCTCGGTGCCGTCTCTGAAGACGGTC
TGCGTCGACCAACTCGAGAGGGGCTTCCTCGCTACTGACAACGTGGTAGACATGCTGCAG
CTTGCCAGGCTGTGTGACGCGCCCCGCCTCGCGCTCGCCTGTGCCCGGATGGTCATCGGG
GATTTCAAGACCATCTCTCTGACGGATGGGTGGAAAGTGATGAGACGGACCAATCCAAGT
ATGGAACAGGAGCTGCTCGAGTCTCTTGTCGAAGCTGATACGAGAAGGCAGGAAAGAGCT
AAAAGGATGGAAGAAAAGAAAGTGTATCTGCAACTGTACGAAGCAATGGAGGCGCTGGTC
CACATCTGCCGGGACGGATGCAGGACGATCGGGCCTCGAGATCAAGCGCTCAAGGGCAGC
CTAGCAGCCGCCTGCAAGTTTCGCGCCTGCAAGGGCATTGAGCTGCTCGTGCGCCACTTC
TCGGCCTGCGGAGTCCGGGTGCCCGGCGGCTGTGCCAACTGCAGGCGGATGTGGCAGCTC
CTCGAGCTGCATTCCCGCATGTGCTTCCTCCCGGACACCTGCAAGGTTCCTCTCTGCAGG
CATTTTAAGGAGAAGATGCGGAATCTGGGGAGGAAGGAAGAGACCAAATGGAACCTTTTG
GTGTGCAAGGTGCTGGAGCGCGGAGGAACCATGGGTTTTATGCCCGGAAGGAGAAAAAAT
TTCATCAACCCTAAGGCCAGCTGGGTGTTGCCACGTGGCTCCTCTTGTATTTGA

Peptide Sequence

PEP ID

Zm00001d042549_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:171514199:171518513:-1 gene:Zm00001d042549 transcript:Zm00001d042549_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ and TAZ domain-containing protein 3
Sequence

MECVELLDSPDLFFLDGGDAHATDFSLENHLESSSSAGAKNKAAPGHSHIHSHSHSRRAQ
LHRSNAPVPPPLPGTSYYGARRKAKAACRRVPEGVLDSWDRLFLEGYQSDLRVSTDGGAE
ISSHSCVLGVKSPVLRAMLEEARLRDGFRCIRVSGAPSEAVRVFIRFLYSSRFEQEQMKE
HALHLLVLSHVFSVPSLKTVCVDQLERGFLATDNVVDMLQLARLCDAPRLALACARMVIG
DFKTISLTDGWKVMRRTNPSMEQELLESLVEADTRRQERAKRMEEKKVYLQLYEAMEALV
HICRDGCRTIGPRDQALKGSLAAACKFRACKGIELLVRHFSACGVRVPGGCANCRRMWQL
LELHSRMCFLPDTCKVPLCRHFKEKMRNLGRKEETKWNLLVCKVLERGGTMGFMPGRRKN
FINPKASWVLPRGSSCI

Transcript Sequence

Transcript ID

Zm00001d042549_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:171514199:171518513:-1 gene:Zm00001d042549 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ and TAZ domain-containing protein 3
Sequence

ACTGGTCACCAAAGAAGTTTTTCTCATTCTGTGGCTTGGACGGGCAGTAGTGTTTCTGAC
TTGTGGCTGCCTCCCCTCCCGTAGCTGCAGCTGCAGCTGCAGAACCAAGGACGGTCACCG
CCACACGAACAGGTGATCCCACGCCGATGAGAGTATGAGACCTCCCTGTCCAGCCTCTTC
CACGGTTCCACTGCTCTGAACGCCCTCAGCCTGGGACCACCGTGCAGGCGGCGGCGGTGC
CCTCTTGTTCTGTCCTGGTCCCGGCCGCCATCCTAACTAACTGGGTTGCTGGGCCTGGGC
GGCGCCGGCGCCCCGACACGTGGCGCGCTCCTAGAGGCCCGGCGTCGCGTCCTTTCCACG
TGAGGACACGACAGTCGGCGGCCGCGTCCGGCTACTTGCCGGATTCTGCTTTCTGTGTGA
AGGCCGCCACTTTTCCGTGCCTCTCATCTCATCTCCTCGTCTCGCCTAGTCCATTTCCAT
TTTGTAGGGAACACTTGTCAGGACAGGCGCCTTGGCGTGAGTCGCCATAGGAAGGGGAGG
AGGCCTCCAAAAGTTTCTGTGGAGCGACGAGGACGAGGACGCCGTGGTGAGTGAGTGAGT
GGTGAACGAGCTCCCTTTTCGTTCTCCGCCTCGCTCTCGTCTCAGAGGCTTTGCAGTTTG
CACTCCAGACTGATTTCACTTCAGCCCAGAGCAGGAGGCAGTTGATGGAATGCGTGGAGC
TGCTGGATTCTCCCGATCTCTTCTTCCTGGACGGCGGCGATGCGCATGCGACCGACTTCT
CACTGGAGAACCATCTCGAGTCAAGTAGCTCGGCAGGTGCCAAAAACAAAGCTGCGCCGG
GTCATAGTCATATTCATAGTCATAGTCATAGCCGGCGTGCTCAGCTTCATCGGAGTAACG
CGCCTGTTCCACCGCCGCTGCCTGGAACCTCTTATTATGGCGCGCGGAGGAAGGCGAAGG
CCGCCTGTCGCCGTGTCCCCGAAGGCGTCCTGGATTCCTGGGACAGGTTGTTCTTGGAGG
GATACCAGTCTGACCTCCGTGTCTCCACAGACGGCGGCGCTGAGATTTCGTCGCATTCCT
GCGTTCTCGGCGTCAAATCCCCTGTCCTGAGAGCTATGCTGGAGGAAGCTAGACTGAGAG
ATGGGTTTCGGTGTATCCGTGTCTCTGGCGCGCCTTCGGAAGCAGTCCGTGTCTTCATCA
GATTTCTCTACTCTTCACGGTTTGAGCAGGAACAGATGAAGGAGCACGCTCTGCATTTGC
TTGTGCTCTCCCACGTCTTCTCGGTGCCGTCTCTGAAGACGGTCTGCGTCGACCAACTCG
AGAGGGGCTTCCTCGCTACTGACAACGTGGTAGACATGCTGCAGCTTGCCAGGCTGTGTG
ACGCGCCCCGCCTCGCGCTCGCCTGTGCCCGGATGGTCATCGGGGATTTCAAGACCATCT
CTCTGACGGATGGGTGGAAAGTGATGAGACGGACCAATCCAAGTATGGAACAGGAGCTGC
TCGAGTCTCTTGTCGAAGCTGATACGAGAAGGCAGGAAAGAGCTAAAAGGATGGAAGAAA
AGAAAGTGTATCTGCAACTGTACGAAGCAATGGAGGCGCTGGTCCACATCTGCCGGGACG
GATGCAGGACGATCGGGCCTCGAGATCAAGCGCTCAAGGGCAGCCTAGCAGCCGCCTGCA
AGTTTCGCGCCTGCAAGGGCATTGAGCTGCTCGTGCGCCACTTCTCGGCCTGCGGAGTCC
GGGTGCCCGGCGGCTGTGCCAACTGCAGGCGGATGTGGCAGCTCCTCGAGCTGCATTCCC
GCATGTGCTTCCTCCCGGACACCTGCAAGGTTCCTCTCTGCAGGCATTTTAAGGAGAAGA
TGCGGAATCTGGGGAGGAAGGAAGAGACCAAATGGAACCTTTTGGTGTGCAAGGTGCTGG
AGCGCGGAGGAACCATGGGTTTTATGCCCGGAAGGAGAAAAAATTTCATCAACCCTAAGG
CCAGCTGGGTGTTGCCACGTGGCTCCTCTTGTATTTGAAACACTCAAACCTCGCAGGGGT
ACTTTTATGTTAGACGAGAAGGGGACCAGGAGGAGCAGGAACAAAAAAGAAAAACGTCAG
AACAGCTGTTGCGTGAATCGTGATGATACTTTAAAAAGGAAAAAGCATCTAATTTTGACC
ATC