Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042543_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:3:171453458:171457431:-1 gene:Zm00001d042543 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative metallophosphoesterase
Sequence	ATGAATGATCTGCAGAATAGTGGTCGGAAGCATCTGTTTGTTGGCTTTGATAGCACAATG GAGATTGGTCTTAGAGGTCCAACCAATCTATTTGGACATCCAACTGACAAGCAGATGATT GAATTGGATCAAGCATTATCACAGTGGAATACTGACTTTGACAAGGTTCCAGTGACAAAA ATCGCATTTGGGCACTTCCCGTTGTCTTTCTCAGCATTAACAGAGTCAGGAAAAAGTATC AAGGATGTTTTTCTAAAGCAATCATTGGCAGCATATTTGTGTGGTCATCTTCATACAAGG TTCGGGAAGAACTTGAAACGATACTACCATCGGGCAGTCCAGGAACCATCATTATCAGAG CATTACTACCAACATAACATGCACCAAGGAGATGCATTCCAGGGTAATAAGGAAAACTGT TCTGAAGAAGCTTCTCATGTTGAAGAGTTCTGGGAATGGGAGATGGGTGATTGGAGAAAG AGCAGAAGCATGAGGATACTAGCAATTGATGATGGTTATGTTTCCTATACCGATATAGAT TTCAGATTAGGTTCAAAGAGCATAATCATACTACCTACCTTTCCCCTTGATTCAAGATTC ATGCAGAGAGCCTCTGCTTTTCGTGATTTTAAATGTCATGTCATGGGGGCATCATCTTTT GATACCGTGAGAGCTCTTGTATTCTCTAAACATGAGATAGTATCTGTTTCTGTAAAAATA TACGACTCAAGGCCAGGAACTCTTGAAATAGTCTTCGACTCTGAAATGAAAAGAGTGGAT TCCAATGAAACTCGAGGAAATATGTATTTGATACCATGGAACTGGAGGGCATTTGAAGAT TCCTCTCCCAGCCGATATTGGCTCCAAATTGAAGTGATGGATATAACAGGTGACACAAGT GTCAGCCAGTTGAGGCCATTCTCTGTTAACGGCTTGCTGGCAAGAGTGAACTGGACATGG AAAGAGTTTTTTGTGATTGGTATTCAGTGGGCTTCAATATATCATCCTGCACTGTGGTGT GCCTTTTCTCTAATCTTTTCGTTGCTTCTTGTACCACAAGTTTTAGCAGTGGTATTCAAA GATCGGTTCACATATAAATCTCTATGCGCATATGGTGGGCAGAGGACACTGTTGAAGTCT CTAGTTGGTGGTTTCATCTGTTGTTTTGTTGAACTCGCCAGGCTGGTTCTTGTATGGTTA TTGCTACTGTTATATGCTATCTATTTAGTTTTTATACCTTGGTTATTCGGTCACCCTATT ACTGAAGATGGTAGCCTGACTTACATGACACATAAAGGCTGGATTCTAAAAGGACCCAGT AGTAGCAACGAAGTAGTCCATGCTGGGATTCCAGATGTCATGGTCATTGTTCTACCTCAC CTTTGCTTTGTGTTAGTACCCACCATTGTGATTTTAGCTGCCATGGCTGCTGAGAGAACA GCATATCGAGAGCATTATCTTTCTCGATCAGGAAAGAAGAAAGATGACTACCGTAAGAGC AGGAGACAGATAGAACATGAAAACTTTTGGAACGGTCGCTGGATTAGCAAATTTCTGTGT CTTCTCTGCGTGGTGGTTCTATGCAAACATTGGAAGCTTTGCAGAGCGCTCGTGAAGGCT TATGCTATGAACCCCTTGCTCCATGCGCCAGTACTTTTCTTCTTCGTTCCTTTACTCATG GTGTTTGCCATCTACAAGACACGGTCCATTTAG

Peptide Sequence

PEP ID	Zm00001d042543_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:3:171453458:171457431:-1 gene:Zm00001d042543 transcript:Zm00001d042543_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative metallophosphoesterase
Sequence	MNDLQNSGRKHLFVGFDSTMEIGLRGPTNLFGHPTDKQMIELDQALSQWNTDFDKVPVTK IAFGHFPLSFSALTESGKSIKDVFLKQSLAAYLCGHLHTRFGKNLKRYYHRAVQEPSLSE HYYQHNMHQGDAFQGNKENCSEEASHVEEFWEWEMGDWRKSRSMRILAIDDGYVSYTDID FRLGSKSIIILPTFPLDSRFMQRASAFRDFKCHVMGASSFDTVRALVFSKHEIVSVSVKI YDSRPGTLEIVFDSEMKRVDSNETRGNMYLIPWNWRAFEDSSPSRYWLQIEVMDITGDTS VSQLRPFSVNGLLARVNWTWKEFFVIGIQWASIYHPALWCAFSLIFSLLLVPQVLAVVFK DRFTYKSLCAYGGQRTLLKSLVGGFICCFVELARLVLVWLLLLLYAIYLVFIPWLFGHPI TEDGSLTYMTHKGWILKGPSSSNEVVHAGIPDVMVIVLPHLCFVLVPTIVILAAMAAERT AYREHYLSRSGKKKDDYRKSRRQIEHENFWNGRWISKFLCLLCVVVLCKHWKLCRALVKA YAMNPLLHAPVLFFFVPLLMVFAIYKTRSI

Transcript Sequence

Transcript ID	Zm00001d042543_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:171453458:171457431:-1 gene:Zm00001d042543 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative metallophosphoesterase
Sequence	GGGCATCGTAGGCGAACTTCCACTCCAGTGCTGCAAACGTAAAGATGCGGGTTGGGGGAC TGCCGGACTGGGGAGTGGGACGAGACGACCAGACAAATCCAGAATCGCAGTCGCGTTCTG CTCCTGGAGGCCCCCGCCTGGCCGCCTGCGCCTTCGCCATGGAATCGCGCGGCAAGCGGA TCCTCCCCTTTCTGTTGGTCATTATCGCCGCTGCGGCGGCTCCGTCCGCCATGCCCCGTG ACGAGAGAGAGGTGGTGGTAGTTTCCGGTGCGCCGGACGGGGTTGTGTGGGTGGCCCAGC TCTCGGATCTCCACTTCAGCGTGCACCACCCGGAGCGCGCCTACGACTTCCGGCGGTATG TCGGCCCGGCGCTGGCCATGGTCAACCCCGACCTCGTGCTGATCACTGGAGACCTTACTG ATGGTAAAAGCAAAGATCTGTTAACAATGAAGCAAAACGAGGTCGAATGGGTAGAATATG AAAGTACAATGAAGGAAATAATTGAAAATAGCAAGCTTCCAAGAAGAATTTTCTATGATA TGAGAGGAAACCATGATAGCTTTGGTGTACCAGCATCTGGTGAGGACTATGACTTTTATA GTAAGTATAGCATCAACGCCAAACTAAGACGACAGGGGCGTGTCCAAAGCATTACTTTGG AGGTCAGTAGTTTCTCTATGTATGATCGATACTTATCTTGTGCAGGAAGAATGATACTGT ACTTATTTCATTGCCATCTTGTAGTTCAAGTGTGTTGTTCTTTGTTATATATAGTGTTAT GGCAATTTCTTTTAGAATACGCTTGAAGCTGCATTTATGAATGATCTGCAGAATAGTGGT CGGAAGCATCTGTTTGTTGGCTTTGATAGCACAATGGAGATTGGTCTTAGAGGTCCAACC AATCTATTTGGACATCCAACTGACAAGCAGATGATTGAATTGGATCAAGCATTATCACAG TGGAATACTGACTTTGACAAGGTTCCAGTGACAAAAATCGCATTTGGGCACTTCCCGTTG TCTTTCTCAGCATTAACAGAGTCAGGAAAAAGTATCAAGGATGTTTTTCTAAAGCAATCA TTGGCAGCATATTTGTGTGGTCATCTTCATACAAGGTTCGGGAAGAACTTGAAACGATAC TACCATCGGGCAGTCCAGGAACCATCATTATCAGAGCATTACTACCAACATAACATGCAC CAAGGAGATGCATTCCAGGGTAATAAGGAAAACTGTTCTGAAGAAGCTTCTCATGTTGAA GAGTTCTGGGAATGGGAGATGGGTGATTGGAGAAAGAGCAGAAGCATGAGGATACTAGCA ATTGATGATGGTTATGTTTCCTATACCGATATAGATTTCAGATTAGGTTCAAAGAGCATA ATCATACTACCTACCTTTCCCCTTGATTCAAGATTCATGCAGAGAGCCTCTGCTTTTCGT GATTTTAAATGTCATGTCATGGGGGCATCATCTTTTGATACCGTGAGAGCTCTTGTATTC TCTAAACATGAGATAGTATCTGTTTCTGTAAAAATATACGACTCAAGGCCAGGAACTCTT GAAATAGTCTTCGACTCTGAAATGAAAAGAGTGGATTCCAATGAAACTCGAGGAAATATG TATTTGATACCATGGAACTGGAGGGCATTTGAAGATTCCTCTCCCAGCCGATATTGGCTC CAAATTGAAGTGATGGATATAACAGGTGACACAAGTGTCAGCCAGTTGAGGCCATTCTCT GTTAACGGCTTGCTGGCAAGAGTGAACTGGACATGGAAAGAGTTTTTTGTGATTGGTATT CAGTGGGCTTCAATATATCATCCTGCACTGTGGTGTGCCTTTTCTCTAATCTTTTCGTTG CTTCTTGTACCACAAGTTTTAGCAGTGGTATTCAAAGATCGGTTCACATATAAATCTCTA TGCGCATATGGTGGGCAGAGGACACTGTTGAAGTCTCTAGTTGGTGGTTTCATCTGTTGT TTTGTTGAACTCGCCAGGCTGGTTCTTGTATGGTTATTGCTACTGTTATATGCTATCTAT TTAGTTTTTATACCTTGGTTATTCGGTCACCCTATTACTGAAGATGGTAGCCTGACTTAC ATGACACATAAAGGCTGGATTCTAAAAGGACCCAGTAGTAGCAACGAAGTAGTCCATGCT GGGATTCCAGATGTCATGGTCATTGTTCTACCTCACCTTTGCTTTGTGTTAGTACCCACC ATTGTGATTTTAGCTGCCATGGCTGCTGAGAGAACAGCATATCGAGAGCATTATCTTTCT CGATCAGGAAAGAAGAAAGATGACTACCGTAAGAGCAGGAGACAGATAGAACATGAAAAC TTTTGGAACGGTCGCTGGATTAGCAAATTTCTGTGTCTTCTCTGCGTGGTGGTTCTATGC AAACATTGGAAGCTTTGCAGAGCGCTCGTGAAGGCTTATGCTATGAACCCCTTGCTCCAT GCGCCAGTACTTTTCTTCTTCGTTCCTTTACTCATGGTGTTTGCCATCTACAAGACACGG TCCATTTAGCTGTTCGGGAGTTCTGAAGATGTGCTGCACTGGACTGTCCAATAAATGGTG CTTCAACTGTGAAGACTGAAGACTAACCCACAACTGAAGGTGTGCTACTTCGATTTGTCA CTTTCTCTCTCTTTCAGAGAGCAGATTTGTTAGATTGTTTAACAGGCATGTATAGCTTTC AGCGTTGTGCTCCGTATAAATGAGGGACTGCACGGCATTTCATTAGAATGGAATGGTTAG GATTTGAACCAAGGAAGAAGAGACTAAACTGCTCAATATAGTTTTTCCTCTTTCTTT