Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042535_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:171055517:171058160:-1 gene:Zm00001d042535 gene_biotype:protein_coding transcript_biotype:protein_coding description:selenoprotein family protein
Sequence

ATGGATCGGTCGTATCTCCCCGTGGCGGCGGCGGCCGTCGCCCTGGTCCTCGTGTGCTGC
TCCGGCCTCTGCCGCGGCGAGCGGCTCGGGGCGAGGGAGTGCGAGGACCTGGGGTTCACC
GGCCTCGCTCTCTGCTCCGACTGCAACGCGCTCTCCGAGTTCGTCAAGGACCAAGAGCTG
GTGGAGGATTGCCATAAATGTTGCACCGAGGATTCAGATGATTCTATCAGCAAGCTCACA
TTTTCTGGTGCAATTATTGAGGTGTGCATGAGGAAACTGGTATTTTATCCAGAAGTTGTT
GGCTTCCTCGAAGAAGATAAAGACGACTTCCCATATGTGGAAACCCGTTATTCTTATGGT
TCGCCACCAAAGCTCATAATGCTTGACAACAAGGGTGAACAGAAGGAGACCATAAGGCAA
GTCCTACTTAATTCTAGAGTAAACCTCCAACTATCTGATTTACATTCTTACACTTGTATT
ACTGCAAATAGTATAAGAACTGCCTGGCTGAATCTTTTTCATATCCTGTCTTAG

Peptide Sequence

PEP ID

Zm00001d042535_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:171055517:171058160:-1 gene:Zm00001d042535 transcript:Zm00001d042535_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:selenoprotein family protein
Sequence

MDRSYLPVAAAAVALVLVCCSGLCRGERLGARECEDLGFTGLALCSDCNALSEFVKDQEL
VEDCHKCCTEDSDDSISKLTFSGAIIEVCMRKLVFYPEVVGFLEEDKDDFPYVETRYSYG
SPPKLIMLDNKGEQKETIRQVLLNSRVNLQLSDLHSYTCITANSIRTAWLNLFHILS

Transcript Sequence

Transcript ID

Zm00001d042535_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:171055517:171058160:-1 gene:Zm00001d042535 gene_biotype:protein_coding transcript_biotype:protein_coding description:selenoprotein family protein
Sequence

TCGTCGTCGTGGTGGTGCTTGCGGCAGCTCCGGAGTCCAGGCAGCACGCTAGTCGGGGGG
CGCGGGGGAGGAGATATGGATCGGTCGTATCTCCCCGTGGCGGCGGCGGCCGTCGCCCTG
GTCCTCGTGTGCTGCTCCGGCCTCTGCCGCGGCGAGCGGCTCGGGGCGAGGGAGTGCGAG
GACCTGGGGTTCACCGGCCTCGCTCTCTGCTCCGACTGCAACGCGCTCTCCGAGTTCGTC
AAGGACCAAGAGCTGGTGGAGGATTGCCATAAATGTTGCACCGAGGATTCAGATGATTCT
ATCAGCAAGCTCACATTTTCTGGTGCAATTATTGAGGTGTGCATGAGGAAACTGGTATTT
TATCCAGAAGTTGTTGGCTTCCTCGAAGAAGATAAAGACGACTTCCCATATGTGGAAACC
CGTTATTCTTATGGTTCGCCACCAAAGCTCATAATGCTTGACAACAAGGGTGAACAGAAG
GAGACCATAAGGCAAGTCCTACTTAATTCTAGAGTAAACCTCCAACTATCTGATTTACAT
TCTTACACTTGTATTACTGCAAATAGTATAAGAACTGCCTGGCTGAATCTTTTTCATATC
CTGTCTTAGTTCATTACATACACTTATATATGTTGTCTGCTTCCAATCATCCTTGCTCGT
GCAGTAATGTCATGTAGTTCATGTAATACTCTGATGACTGACACGATAGGTAAAGAAATG
ATTGATTTGTTTGTGCGTGCATGCTTCAAAACATAGTTTTATTGATAGAAACAATGCTTA
AGTGTACTTCTACTGGAATGATTCATAAAGTTGCAGTAGTATAGTCAATAAACTAGGTAA
TTTGCTGAAGTGGCCTGAATTTAACCTTGGCGCATCATTCATCTTTAAGGGACAGGTTTA
ACTATTGTACTGAATAAATTGCCACCTTTCTATATGCGCGCCAATTGCCTAACGTAGCTA
ATGTCTGGTAGAAACAGTGTTCTCAATTGTTCATTGGACCATTTACTGAAAATCTGAAAC
GGGCTGAAATTGGCAGGATTGATAACTGGAAGCGAGAGCACATTCGGCAGTTTCTCAAGG
AGAAAGTGAAGCCAGTGAAATTAGACAGCTGAGTTCTTGCGATAAGTGCCTGAATATTTC
CAGTTTGACGTTCCAATAGAACCTACGTAACCTGTACCTTGCTACCAAAATCGTAGCTGA
TGTATGAGATTGGCGTTCTCATATTTACACCTCAAAATGATCGTACGAGAAGCCTGTGTG
TGCGGCATACTTTGTAACCTGTTTGTTACTCTTACAGTCAGGTAGTAAGTATCTGGCACT
ATGATCCGTG