Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042530_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:3:170938371:170943460:-1 gene:Zm00001d042530 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IM30 protein homolog1 description:Membrane-associated protein VIPP1 chloroplastic
Sequence	ATGGAGATTAGGGCTCCGCCGACGAGCCTGAGGCTCGCGCCGCCGCCCGCCGCCGCCAGC TTCCGCCGAACCCCGCTTAGGACCTCCTTCCTTCGCGGCAGCGTGTCACTTAAAGTTGTG CAAGTACGGCAGTCAAATGTCAACAGATTTAAGTGCAATAGCATACGAAGTAACCTCTTT GATAGGCTAACAAGGGTTGTCAGGTCCTACGCAAATGCAGTTCTAAGTTCGTTTGAAGAC CCTGAGAAGATTCTAGACCAGGCAGTTCTGGAGATGAATGATGACTTGACAAAGATGCGG CAGGCCACTGCACAGGTCTTGGCATCTCAAAAGCGGCTTGAGAATAAATATAAAGCTGCA GAACAAGCTTCTGCTGATTGGTATCGGAGGGCTCAACTTGCTCTTCAAAAGGGTGACGAG GATCTTGCTCGTGAAGCCCTTAAGCGGCGTAAATCATATGCTGACAATGCAAGCTCCTTA AGATCCCAGCTTGATCAGCAGAAGGGTGTAGTTGAAAATCTGATTTCAAATACCCGGCTT CTTGAGAGCAAGATAGCAGAGGCCAAGCAGAAAAAGGATACCCTAAAAGCTCGTGCTCAA TCAGCAAAGACTGCTACAAAAGTGAGTGAAATGTTGGGCAACGTGAATACAAGTAGCGCC CTTTCTGCATTTGAGAAAATGGAGGAAAAAGTTATGGCGATGGAATCCCAAGCAGAGGCA CTCGGCCAGTTAGCAACTGATGATTTAGAAGGAAAGTTTGCACTGCTTGAGACTTCATCT GTTGATGATGATCTTTCACAACTGAAAAAGGAATTGTCTGGAAGCTCTTTGAAAGGAGAG CTTCCTCCAGGCAGAACAGCAGTCAGCAACTCAGGTGCTGGGCGCCCTTTCCCCGACCTA GAGATTGAGAGCGAGCTAAACGAGCTGCGGAGGAAAGCCAAGGAATATTAG

Peptide Sequence

PEP ID	Zm00001d042530_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:3:170938371:170943460:-1 gene:Zm00001d042530 transcript:Zm00001d042530_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IM30 protein homolog1 description:Membrane-associated protein VIPP1 chloroplastic
Sequence	MEIRAPPTSLRLAPPPAAASFRRTPLRTSFLRGSVSLKVVQVRQSNVNRFKCNSIRSNLF DRLTRVVRSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAA EQASADWYRRAQLALQKGDEDLAREALKRRKSYADNASSLRSQLDQQKGVVENLISNTRL LESKIAEAKQKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEA LGQLATDDLEGKFALLETSSVDDDLSQLKKELSGSSLKGELPPGRTAVSNSGAGRPFPDL EIESELNELRRKAKEY

Transcript Sequence

Transcript ID	Zm00001d042530_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:170938371:170943460:-1 gene:Zm00001d042530 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IM30 protein homolog1 description:Membrane-associated protein VIPP1 chloroplastic
Sequence	ATCGCTTCTCATCTCTTCTCCACACGAACTCGCCCTCTCGACTCTCGAGAGATAGAGCGA GGCACCAAGAAGGGAAAAAAAAAGAGGGACAGGAAAAAAAATCATTCTCGTTTCGCTCTC CGCTAGACCCCGCCCGAATCAATGGAGATTAGGGCTCCGCCGACGAGCCTGAGGCTCGCG CCGCCGCCCGCCGCCGCCAGCTTCCGCCGAACCCCGCTTAGGACCTCCTTCCTTCGCGGC AGCGTGTCACTTAAAGTTGTGCAAGTACGGCAGTCAAATGTCAACAGATTTAAGTGCAAT AGCATACGAAGTAACCTCTTTGATAGGCTAACAAGGGTTGTCAGGTCCTACGCAAATGCA GTTCTAAGTTCGTTTGAAGACCCTGAGAAGATTCTAGACCAGGCAGTTCTGGAGATGAAT GATGACTTGACAAAGATGCGGCAGGCCACTGCACAGGTCTTGGCATCTCAAAAGCGGCTT GAGAATAAATATAAAGCTGCAGAACAAGCTTCTGCTGATTGGTATCGGAGGGCTCAACTT GCTCTTCAAAAGGGTGACGAGGATCTTGCTCGTGAAGCCCTTAAGCGGCGTAAATCATAT GCTGACAATGCAAGCTCCTTAAGATCCCAGCTTGATCAGCAGAAGGGTGTAGTTGAAAAT CTGATTTCAAATACCCGGCTTCTTGAGAGCAAGATAGCAGAGGCCAAGCAGAAAAAGGAT ACCCTAAAAGCTCGTGCTCAATCAGCAAAGACTGCTACAAAAGTGAGTGAAATGTTGGGC AACGTGAATACAAGTAGCGCCCTTTCTGCATTTGAGAAAATGGAGGAAAAAGTTATGGCG ATGGAATCCCAAGCAGAGGCACTCGGCCAGTTAGCAACTGATGATTTAGAAGGAAAGTTT GCACTGCTTGAGACTTCATCTGTTGATGATGATCTTTCACAACTGAAAAAGGAATTGTCT GGAAGCTCTTTGAAAGGAGAGCTTCCTCCAGGCAGAACAGCAGTCAGCAACTCAGGTGCT GGGCGCCCTTTCCCCGACCTAGAGATTGAGAGCGAGCTAAACGAGCTGCGGAGGAAAGCC AAGGAATATTAGGTTCATTCCTTGTCGATTCAGCAGGCCTGACGGAATCTCATTTCCAAG AAAATATAGTGCAGCTGCAGATTGCTCCATTGCGCGTTTCGAAAGTTGAAACACAAGTGC GCATTGACTGTTTGTTAAAGAGTATGGAATCGGCTAATTTCTCGGCATTTTCCCCCTCGA GTGACATTTGTACAGCTATCCATAAAATTGTTGTAAATCACTACTCTCTCTAGAGCCTTT TTTTCATACTATATATAAAGTCAAAGTTCGAAGTTC