Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042528_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:3:170873219:170879316:-1 gene:Zm00001d042528 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chromatin assembly factor 1 subunit FAS1
Sequence

ATGGAAAGCGGCGCCATGGTACTCGGTGTTGTTCGTCCCGAGGAGTCCCCTGACCGCAAC
GGCGGTGGGCCACGGGACGATTTGGGCCCATCGCAGATGCAGGTCGATGGTCCCGTTGTT
CTCAACCAATCCGCTGAGCTCGTCTCGGATGATTCGATGGCCGTCGATGACGTCCCAGTT
CAACAACCATCAGGCCAGCCGGTGGAGGCAACACAACAGTCTCCTGCGACGCTGATTGAT
ACTATCATGGAGGTGCAGAAGCAGCTGAAGCGGAAGAGGGCTTCTAATAGCCCAGTGATT
GATGCCGCCGATAAGGACGCTCTTGTTGCTGGGTGCCGGCAGGAGCTCGAGGGGCTCTTC
CAGTATTACAAGGAGGTTTCTGACCGCAAGATGCAGCTTGACGGCGGGAACCTGTCCTTC
AACGGGATGGTTGGCTGTTTGCTTGAGGAGAGCAGTCTCGGGCTGACTAGGTTGGTGGAC
GAAATATATCAACAGCTGAAGGGATTGGAGGGTGTGTCTGTGGCTTCAGTCCGCAGCTCT
GTGCTGCTCGCTGGCCAGAGGATGATGTACGGGAATTCTTCACTGGACGCTGATGTGTTA
GAAGATGAATCGGAGTCGGCTCTTTGGTGCTGGGAGATAAGAGATCTGCGATTGTTGCCT
GTGAAAGTACGCAGCATTCTGAGTACACGGAGATCTGTCAGAAAGAAAATCCATGAGAGA
ATCACTGCCATATATTCGACTTTGTCGGTTCTTGAAAATTCAGGAGCTTACATCCAAGTA
AATGATCTAAAAAAAGCATCATTGAAATTAAACAAATCACTGAACCTGGAAGGGATCAGA
TCAATGGTGGAAAGAGCGACACAAAAGAACACAGAACGGGGTGTGAAAGATGCTGTATCA
GCAGTTAAGGAATTGATGCAAGAGACAGATAAAAATGACCAAAATGTTAGAAGGCTTGAG
GATACTAGTGTCTCTGAGCCGCAGAATGGGAACTCACTTGGTAATGAGAAAGAGATTCAG
AAAGCACAAAAACAAGTGGAGAAGGAAATAAAGCGCCAGGAGAAAGAAGAAGCTCAGATG
AGAAAACTTCAAAAGAAACAGCAAGAAGAGGCCCTAAGAGAACAGAAGAGACATGAAAAG
GAGGAGGCTGAAGCCAAGAAGCAACAAAAGAAGCAGGAAGATGAAGCTCTGAAAGAACAG
AAGAGACGTGAAAAGGAGGAGGCTGAAGCTAAGAAACAACAAAAGAAGCAGGAAGAGGAA
GTTCTGAAAGAACAGAAGCGTCGTGAAAAGGAAGAAGCTGAAATGAAGAAACAACAGAAA
AAACAGCAAGATGAAGCTGAGAAAGAACAGAAGCGCCTTGAGAAGGAAGCTGCACAACTC
AAGAAGCAACTGGTCATTCAAAAACAAGCTTCTATGATGGAACGCTTTTTCAAAAGTAAG
AAAGACAATGGAAAACATCAAAAACCTGGAGAGAACAACTCAGCTGAAGATCCATGCAAT
GACAACAAAGAGACAATACCAGCAACCACATCAAAAATTGATTCTTCATTGTATCAACAA
GAGGGATGGGTTTTAGATGATCTTCGGAGGTTGCAGGTCACTGGTTGGAAGAAGCTATCT
AGCTACAATAGGTCCTCCAGATGGGGTACAAGATGCAAGCCCAAGATGGAGGCATTTAAA
GAGCTGAAGCTTCAGAAATCCTCAGATGATATGGTTGATGAAATACTTTCCACTCCAAAT
GAAGATGGTGGCCGCAATCCAATTCAGGAGAACGAACATGATAAGCTTGAAAGTGATATT
GACATGATACAGGCTAGTGAAATGCAATGCCATGGTGCTAGTAACCCTAAACCTCTGCAA
ACGAGATTAATTAGAATGAAGCTTCTGCAATTTGACAAAAGTAACAGGCCAGCATATTAT
GGATCCTGGAGGAAGAAAAGTGCTGCTATTAGTCCAAGGTGTCCATTTAAGATGGATCCT
GATCTTGACTACGAGGTTGATAGTGATGATGAATGGGAAGAGGAGGATCCTGGTGAGAGT
CTTTCTGACTGTGAGAAGGATAATGATGAATTTATGGAGGAAGATTCCAAAATTACAGAT
GAAGAGGATGAAGATAGCTTTGTTGTGCCTGATGGCTATCTCTCAGACAACGAGGGGATA
CAAATTGAAAGCCTATTGGACGATAAAGAAGAGGAGGCCAATAGCTCCCCAAATGGTCAG
TGTACAGAAGTTGAAGAGTTCAGGTCTCTGCTCCGCCAACAAAGAGTCCTGAACACTTTG
ACTGAGCAAGCTCTCCGGAAGAGCCAACCTCTTATTATATGCAACCTAAATCACGAAAAA
GCTGAATTACTGACTGCTGAAGACCTCAAGGGAACGGAAAAGATTGAGCAGCTATGCTTG
CAAGTTCTTTCAATGCGCATCTGTCCAGGAGGTGCAATTGTTGATGTGCCTCTAACTGAC
AGCTCATCTGCAACTGTTGAGGAAATTAACCAACCCAATGTGAAGAATGGCTCTCCTGAG
GCTGCATCTGCTATACCAGAAACAGACCTGCCAGAATTTGTACAGGTGATAAGATCATGT
CGAGATGGTATCCACAAGGTGGTGGAATTACTGCAGCACAAGTTTCCAAATGTTCCAAAG
ACTCAACTGAATCGTAAAGTGAGGGAGATATCTGACTTCATTGACAATCATTGGAAGGTA
AAGAAAGAGATTCTTGACAAGCTAGGGTTGGATTCGTCACCAGTGAAACCCAAGAAGAAT
AAAAGCATAGCTATGTACTTCTCGAAGAGATGTTTACCTCCGGAAGAGGCTGTCAATGCT
CTGGCTGCTTCTCCTGAGTTGCGGTTGAAATCTAGAAATGGTGGCCGCGAAGCTCCCCAG
ATCAATCTGTTCCCCTCAGAGCAGTAA

Peptide Sequence

PEP ID

Zm00001d042528_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:3:170873219:170879316:-1 gene:Zm00001d042528 transcript:Zm00001d042528_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chromatin assembly factor 1 subunit FAS1
Sequence

MESGAMVLGVVRPEESPDRNGGGPRDDLGPSQMQVDGPVVLNQSAELVSDDSMAVDDVPV
QQPSGQPVEATQQSPATLIDTIMEVQKQLKRKRASNSPVIDAADKDALVAGCRQELEGLF
QYYKEVSDRKMQLDGGNLSFNGMVGCLLEESSLGLTRLVDEIYQQLKGLEGVSVASVRSS
VLLAGQRMMYGNSSLDADVLEDESESALWCWEIRDLRLLPVKVRSILSTRRSVRKKIHER
ITAIYSTLSVLENSGAYIQVNDLKKASLKLNKSLNLEGIRSMVERATQKNTERGVKDAVS
AVKELMQETDKNDQNVRRLEDTSVSEPQNGNSLGNEKEIQKAQKQVEKEIKRQEKEEAQM
RKLQKKQQEEALREQKRHEKEEAEAKKQQKKQEDEALKEQKRREKEEAEAKKQQKKQEEE
VLKEQKRREKEEAEMKKQQKKQQDEAEKEQKRLEKEAAQLKKQLVIQKQASMMERFFKSK
KDNGKHQKPGENNSAEDPCNDNKETIPATTSKIDSSLYQQEGWVLDDLRRLQVTGWKKLS
SYNRSSRWGTRCKPKMEAFKELKLQKSSDDMVDEILSTPNEDGGRNPIQENEHDKLESDI
DMIQASEMQCHGASNPKPLQTRLIRMKLLQFDKSNRPAYYGSWRKKSAAISPRCPFKMDP
DLDYEVDSDDEWEEEDPGESLSDCEKDNDEFMEEDSKITDEEDEDSFVVPDGYLSDNEGI
QIESLLDDKEEEANSSPNGQCTEVEEFRSLLRQQRVLNTLTEQALRKSQPLIICNLNHEK
AELLTAEDLKGTEKIEQLCLQVLSMRICPGGAIVDVPLTDSSSATVEEINQPNVKNGSPE
AASAIPETDLPEFVQVIRSCRDGIHKVVELLQHKFPNVPKTQLNRKVREISDFIDNHWKV
KKEILDKLGLDSSPVKPKKNKSIAMYFSKRCLPPEEAVNALAASPELRLKSRNGGREAPQ
INLFPSEQ

Transcript Sequence

Transcript ID

Zm00001d042528_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:170873219:170879316:-1 gene:Zm00001d042528 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chromatin assembly factor 1 subunit FAS1
Sequence

GTTTTTTGTGAAAATAAACTGAGAAAGAGGCAAAGAGCCCTGCCGCTGGCTCGACTGCGG
CCGTCCCGCGGGAAGCCAAAATCACCGAAACGAAAAAATTCTTGAAACCGCCGACCGCGG
GAAACATTTTGCGCGCCGCGCCCAGCTCCCTTCACAAATAATCCCTTCCCGGTTCACCTC
TTCCTCTCCCCCAAATCTCCAAATCTCCGGTCGTCTCCAGTTCCCACCTCGCGCCCCAAA
TCCGTATCCACCGCCACCGCCACCGCCCACCACCCCGCCGCCAACGCTGACGCCGCCTCC
TCCGGCTGCACCCGTCACGCCAGGTGCTTGGACTTCGGGAATCTGCAGGTTCAGTAGAGT
AGACAAGTGTTTGAGCAAGGACTGGATAGAGGAATGCGCTGCTTGTTCCTAGAGTAGCAC
CCGCAAGATCCAAGTCTTCCCGCGATGGAAAGCGGCGCCATGGTACTCGGTGTTGTTCGT
CCCGAGGAGTCCCCTGACCGCAACGGCGGTGGGCCACGGGACGATTTGGGCCCATCGCAG
ATGCAGGTCGATGGTCCCGTTGTTCTCAACCAATCCGCTGAGCTCGTCTCGGATGATTCG
ATGGCCGTCGATGACGTCCCAGTTCAACAACCATCAGGCCAGCCGGTGGAGGCAACACAA
CAGTCTCCTGCGACGCTGATTGATACTATCATGGAGGTGCAGAAGCAGCTGAAGCGGAAG
AGGGCTTCTAATAGCCCAGTGATTGATGCCGCCGATAAGGACGCTCTTGTTGCTGGGTGC
CGGCAGGAGCTCGAGGGGCTCTTCCAGTATTACAAGGAGGTTTCTGACCGCAAGATGCAG
CTTGACGGCGGGAACCTGTCCTTCAACGGGATGGTTGGCTGTTTGCTTGAGGAGAGCAGT
CTCGGGCTGACTAGGTTGGTGGACGAAATATATCAACAGCTGAAGGGATTGGAGGGTGTG
TCTGTGGCTTCAGTCCGCAGCTCTGTGCTGCTCGCTGGCCAGAGGATGATGTACGGGAAT
TCTTCACTGGACGCTGATGTGTTAGAAGATGAATCGGAGTCGGCTCTTTGGTGCTGGGAG
ATAAGAGATCTGCGATTGTTGCCTGTGAAAGTACGCAGCATTCTGAGTACACGGAGATCT
GTCAGAAAGAAAATCCATGAGAGAATCACTGCCATATATTCGACTTTGTCGGTTCTTGAA
AATTCAGGAGCTTACATCCAAGTAAATGATCTAAAAAAAGCATCATTGAAATTAAACAAA
TCACTGAACCTGGAAGGGATCAGATCAATGGTGGAAAGAGCGACACAAAAGAACACAGAA
CGGGGTGTGAAAGATGCTGTATCAGCAGTTAAGGAATTGATGCAAGAGACAGATAAAAAT
GACCAAAATGTTAGAAGGCTTGAGGATACTAGTGTCTCTGAGCCGCAGAATGGGAACTCA
CTTGGTAATGAGAAAGAGATTCAGAAAGCACAAAAACAAGTGGAGAAGGAAATAAAGCGC
CAGGAGAAAGAAGAAGCTCAGATGAGAAAACTTCAAAAGAAACAGCAAGAAGAGGCCCTA
AGAGAACAGAAGAGACATGAAAAGGAGGAGGCTGAAGCCAAGAAGCAACAAAAGAAGCAG
GAAGATGAAGCTCTGAAAGAACAGAAGAGACGTGAAAAGGAGGAGGCTGAAGCTAAGAAA
CAACAAAAGAAGCAGGAAGAGGAAGTTCTGAAAGAACAGAAGCGTCGTGAAAAGGAAGAA
GCTGAAATGAAGAAACAACAGAAAAAACAGCAAGATGAAGCTGAGAAAGAACAGAAGCGC
CTTGAGAAGGAAGCTGCACAACTCAAGAAGCAACTGGTCATTCAAAAACAAGCTTCTATG
ATGGAACGCTTTTTCAAAAGTAAGAAAGACAATGGAAAACATCAAAAACCTGGAGAGAAC
AACTCAGCTGAAGATCCATGCAATGACAACAAAGAGACAATACCAGCAACCACATCAAAA
ATTGATTCTTCATTGTATCAACAAGAGGGATGGGTTTTAGATGATCTTCGGAGGTTGCAG
GTCACTGGTTGGAAGAAGCTATCTAGCTACAATAGGTCCTCCAGATGGGGTACAAGATGC
AAGCCCAAGATGGAGGCATTTAAAGAGCTGAAGCTTCAGAAATCCTCAGATGATATGGTT
GATGAAATACTTTCCACTCCAAATGAAGATGGTGGCCGCAATCCAATTCAGGAGAACGAA
CATGATAAGCTTGAAAGTGATATTGACATGATACAGGCTAGTGAAATGCAATGCCATGGT
GCTAGTAACCCTAAACCTCTGCAAACGAGATTAATTAGAATGAAGCTTCTGCAATTTGAC
AAAAGTAACAGGCCAGCATATTATGGATCCTGGAGGAAGAAAAGTGCTGCTATTAGTCCA
AGGTGTCCATTTAAGATGGATCCTGATCTTGACTACGAGGTTGATAGTGATGATGAATGG
GAAGAGGAGGATCCTGGTGAGAGTCTTTCTGACTGTGAGAAGGATAATGATGAATTTATG
GAGGAAGATTCCAAAATTACAGATGAAGAGGATGAAGATAGCTTTGTTGTGCCTGATGGC
TATCTCTCAGACAACGAGGGGATACAAATTGAAAGCCTATTGGACGATAAAGAAGAGGAG
GCCAATAGCTCCCCAAATGGTCAGTGTACAGAAGTTGAAGAGTTCAGGTCTCTGCTCCGC
CAACAAAGAGTCCTGAACACTTTGACTGAGCAAGCTCTCCGGAAGAGCCAACCTCTTATT
ATATGCAACCTAAATCACGAAAAAGCTGAATTACTGACTGCTGAAGACCTCAAGGGAACG
GAAAAGATTGAGCAGCTATGCTTGCAAGTTCTTTCAATGCGCATCTGTCCAGGAGGTGCA
ATTGTTGATGTGCCTCTAACTGACAGCTCATCTGCAACTGTTGAGGAAATTAACCAACCC
AATGTGAAGAATGGCTCTCCTGAGGCTGCATCTGCTATACCAGAAACAGACCTGCCAGAA
TTTGTACAGGTGATAAGATCATGTCGAGATGGTATCCACAAGGTGGTGGAATTACTGCAG
CACAAGTTTCCAAATGTTCCAAAGACTCAACTGAATCGTAAAGTGAGGGAGATATCTGAC
TTCATTGACAATCATTGGAAGGTAAAGAAAGAGATTCTTGACAAGCTAGGGTTGGATTCG
TCACCAGTGAAACCCAAGAAGAATAAAAGCATAGCTATGTACTTCTCGAAGAGATGTTTA
CCTCCGGAAGAGGCTGTCAATGCTCTGGCTGCTTCTCCTGAGTTGCGGTTGAAATCTAGA
AATGGTGGCCGCGAAGCTCCCCAGATCAATCTGTTCCCCTCAGAGCAGTAAAGTTTCTAA
TAAAGGTCCCCTGAAAGTTGGATTAGGGGTCAATGAAGCTACGAACCCAGATGAGCAGAA
AGCTCAGCTATCCATGTAAAGGCTAGGAAGTGCAACTCGGTTTTGCATCGTCACCAATGG
AAGATCTGGATTATGTTTTCAGTGCTGGACATGTAATTTTAGCCTGAAAGTAGGTTTTTA
TTCAATTATTTGGCCTTGATGTGATTAACATGTATGTGTCCTGTTGTTAGCGCAAGGAAT
TGCT