Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042520_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:3:170390777:170394360:-1 gene:Zm00001d042520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	ATGGTTCAACTCTTTTTGCAAGTGCCGGCAGAATGCGGCAGTGTTAATACAGTTGTCGTG GAAGGGAGGAGATCTCTTTTTCACAATGTTGAGTCCATAATCAAGTCATTGACAAAATCA GCAGGCAGGTATGAAGCTCGGCTGTGGCTCTGTGCCACTGTCTCGTTGGTCCATTCGCTC AGTGACTGTGGCCAGAGGGACCTGTTTCTTGATCTCTTAGAGAGGAAGAATTCCAGGCGT GATGTCGCTGCTCGCTTGCTGCGTATGATTTTCGATAAGAAACCCAGAATGGTTGGGTCT ATTCTAGCAAGAAAAGGCCATATACTGGAGGATTTCTTCCGAGGAAATCCAAACAGGATA ATGCAGTGGTTTGGCCACTTTGCTGTTACTGGGGAATCCACACATAGAAAGGGAGCTAAG GCACTTTCGCAGTTTGCGTTTGTAAATCGTGACAGGTGCTGGGAAGAACTTGAGTGGAAA GGCAAGCATGGGCAATCTCCGGCTGTAGTTGCTACCAAGCCTCACTATTTTCGTGATCTT GATGTTCTCGAGACAGTGGAGAATTTCTTAGAGTATGTCCCAGATTTCTGGTCTTCTGAT GAGCTTGCTAATTCTATCAAAGATGGTGAAATACTGCAAATCGATGAAGAATATTTTGTA GATCAATTTTTATACTTAATGTATGAGGAGAATTCCAAAGATGCATGGCATGTGGTTGAA GATTTTTTGATGGACGAGCAGTTCTCTTCTCTTTGCCAGCATCTTCTTATCCATCTGGAT GAGGAAAGGCTTCTTGGTTTCTTAAATTCTTTAGGCAAGCTCATCAATCCTACTATGCAG TGCAAGGAATTGACATTCCCGTGTTGTTGGCTTGAAGTTCTTTTATCAGGACATTATGAT CACATATCTCTTGATGATCTTGTCTTTTTGAACTGTGTCATTGCCAAGGGTAGACAACTT TGGCGGCTCATGAACGATGAAGAACAACACGAAGAATGGGGGCAAATGGAAGAACTTTTG AAGGGCGGAAACCATTTGACTGATGCTGATCATTTTGCTCTCATGAAGGAACTTGTGGAG ACAGAATTACCTGGTGTGCTTAAGTGGGTAGGCATTCAGTCCTGGATAATTTTCTGTGAA TTGTCGAAAGAATGCAAATCAGGAGATTCTTGTGAATCTTTTTTCTCTCATAACAAAATA GAATTTCACAAGGCTGATGATTACTCATTGGTTCGGAATTATGGGTTCTCAATTTCACAT ATGCCTGATATTGATGTTGAAGATCTAACTAGAAGCAGCCATAAAAGGAGAAAGAGGAAT AGGAGAAAGCGCCATAGGTACGAGTCTGATGAGGACAAGTTTGATGAACTGCTTGAACTT GGATCATCTGATGGAAAGAATGGTGTTGAGTCACAGCGTGGAAGCTGGCGCCTTTCAACT GATGGTTTCTCTGCTTCTTGGGACATTTCAGACATACCAGATCACCTTTCTACTTGTTAT TTCACAATTTGGGTAAAGTGGGCTTGCTTTAGATGA

Peptide Sequence

PEP ID	Zm00001d042520_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:3:170390777:170394360:-1 gene:Zm00001d042520 transcript:Zm00001d042520_T005 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	MVQLFLQVPAECGSVNTVVVEGRRSLFHNVESIIKSLTKSAGRYEARLWLCATVSLVHSL SDCGQRDLFLDLLERKNSRRDVAARLLRMIFDKKPRMVGSILARKGHILEDFFRGNPNRI MQWFGHFAVTGESTHRKGAKALSQFAFVNRDRCWEELEWKGKHGQSPAVVATKPHYFRDL DVLETVENFLEYVPDFWSSDELANSIKDGEILQIDEEYFVDQFLYLMYEENSKDAWHVVE DFLMDEQFSSLCQHLLIHLDEERLLGFLNSLGKLINPTMQCKELTFPCCWLEVLLSGHYD HISLDDLVFLNCVIAKGRQLWRLMNDEEQHEEWGQMEELLKGGNHLTDADHFALMKELVE TELPGVLKWVGIQSWIIFCELSKECKSGDSCESFFSHNKIEFHKADDYSLVRNYGFSISH MPDIDVEDLTRSSHKRRKRNRRKRHRYESDEDKFDELLELGSSDGKNGVESQRGSWRLST DGFSASWDISDIPDHLSTCYFTIWVKWACFR

Transcript Sequence

Transcript ID	Zm00001d042520_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:170390777:170394360:-1 gene:Zm00001d042520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	GTTTTCCAATAGTCACATGCCCTTTACTGTGGTGCCCCCTGTATTTCGAGTTCAGCCTGG TTCATTACGTAGCATGTGTGATTCTTTGCTTGTTTTCGCTCCAGATTTCTGGTGAGAAAT TTCACTCCGAAGATGGTTCAACTCTTTTTGCAAGTGCCGGCAGAATGCGGCAGTGTTAAT ACAGTTGTCGTGGAAGGGAGGAGATCTCTTTTTCACAATGTTGAGTCCATAATCAAGTCA TTGACAAAATCAGCAGGCAGGTATGAAGCTCGGCTGTGGCTCTGTGCCACTGTCTCGTTG GTCCATTCGCTCAGTGACTGTGGCCAGAGGGACCTGTTTCTTGATCTCTTAGAGAGGAAG AATTCCAGGCGTGATGTCGCTGCTCGCTTGCTGCGTATGATTTTCGATAAGAAACCCAGA ATGGTTGGGTCTATTCTAGCAAGAAAAGGCCATATACTGGAGGATTTCTTCCGAGGAAAT CCAAACAGGATAATGCAGTGGTTTGGCCACTTTGCTGTTACTGGGGAATCCACACATAGA AAGGGAGCTAAGGCACTTTCGCAGTTTGCGTTTGTAAATCGTGACAGGTGCTGGGAAGAA CTTGAGTGGAAAGGCAAGCATGGGCAATCTCCGGCTGTAGTTGCTACCAAGCCTCACTAT TTTCGTGATCTTGATGTTCTCGAGACAGTGGAGAATTTCTTAGAGTATGTCCCAGATTTC TGGTCTTCTGATGAGCTTGCTAATTCTATCAAAGATGGTGAAATACTGCAAATCGATGAA GAATATTTTGTAGATCAATTTTTATACTTAATGTATGAGGAGAATTCCAAAGATGCATGG CATGTGGTTGAAGATTTTTTGATGGACGAGCAGTTCTCTTCTCTTTGCCAGCATCTTCTT ATCCATCTGGATGAGGAAAGGCTTCTTGGTTTCTTAAATTCTTTAGGCAAGCTCATCAAT CCTACTATGCAGTGCAAGGAATTGACATTCCCGTGTTGTTGGCTTGAAGTTCTTTTATCA GGACATTATGATCACATATCTCTTGATGATCTTGTCTTTTTGAACTGTGTCATTGCCAAG GGTAGACAACTTTGGCGGCTCATGAACGATGAAGAACAACACGAAGAATGGGGGCAAATG GAAGAACTTTTGAAGGGCGGAAACCATTTGACTGATGCTGATCATTTTGCTCTCATGAAG GAACTTGTGGAGACAGAATTACCTGGTGTGCTTAAGTGGGTAGGCATTCAGTCCTGGATA ATTTTCTGTGAATTGTCGAAAGAATGCAAATCAGGAGATTCTTGTGAATCTTTTTTCTCT CATAACAAAATAGAATTTCACAAGGCTGATGATTACTCATTGGTTCGGAATTATGGGTTC TCAATTTCACATATGCCTGATATTGATGTTGAAGATCTAACTAGAAGCAGCCATAAAAGG AGAAAGAGGAATAGGAGAAAGCGCCATAGGTACGAGTCTGATGAGGACAAGTTTGATGAA CTGCTTGAACTTGGATCATCTGATGGAAAGAATGGTGTTGAGTCACAGCGTGGAAGCTGG CGCCTTTCAACTGATGGTTTCTCTGCTTCTTGGGACATTTCAGACATACCAGATCACCTT TCTACTTGTTATTTCACAATTTGGGTAAAGTGGGCTTGCTTTAGATGATTGTCTACACAG TATGTGTAGTATATCAATCTGGGTGCCTTTTCAGCTACAGAATCTATGAGCATGGAGCTC AGGCAGGCATATTTCTGCACTAATTCTGCAACATTTTGGTGATGGGTTCTGATGATGCAT TCTGGGATTGCTGAACGCTGCATGAGATCCAGGACAACTCTCTTTAGTTGGGATGCTGAA GGTTGACACCTGTTGAAGAATTTTGGTTGCATAGGCATTGAATATGGTCCAGGCATTTCC TTGAAACCCATTTGGACTTTGGAGTTAGTTGTAGAGAACTCAGGTATTGACTAAGCTAAG CAAAAACGAGTTTGTAATTGTGTTGTCTAGTGCTAGCGACATTTTGCCAACTACACCTGT TGTAAATATACCAGATTGTTGCTGTGAATTTGATTGGAATTGGGTT