Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042519_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:3:170370858:170388068:1 gene:Zm00001d042519 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCTTTCCCATCTCCTCCCGCGCCACCATCACCGCCGCCTCCTCCAAATCCTGTCCAGG GCCGCCGCCGCCCCAGATGTTGACCTCCACCAGAGGCTGTGCTCTTCGTCTGCAGCGTCG AGCACGAGCCTGTCGATATGGTGGCGGAAGAAGGAGATGGGCAAGGAGGGCCTCATGGCG GTGGCGCTGCTCAAGCGGCTCGCAGCTCTGCCCCCGGAGCCTGCTCGCCTGCTTCTCTAC TGTGTGGTGGCTGCGGGCTTCTCGCGCGGACCAGGAGCTGAGGCACCGAGCAGGGGCAGC CGGCCGTCACTTCTGCCGGCGCAGGGGCCACATGCGGGCGGCCGGGCAAGCAGGCGCAGG GGGCCGGGCAAGCAAGCAGTGCAGCAAGCAGGCGCAGCGCAGGCGGCCGGGCAAGCAAGC AGCGCAACAAGCAGGCGCATGGGGCCAGGGGCCACACGTGACCAGCAGCCAGCAAGCAGC GCAGTCGCAGCCCGGCAGTCTATGATTGCAGCTGCAGAAGCGAACAGATCTGCCAACCTC GGCTCTAATCCACGACATCTCTGCTTCGCGCCGCCGTCCAGCTTCGTCCTGCCAGCCGAC CTCATCCCCGCCGGCCGTCGCCCCAGCCACGACGCCTGGCCGTACCTGTATTTCTCATCC CGCGGTACAAGCCCCAGCCGAGACGCTTGTAGCCTTGTACCGTCCCCGAGCAGTTTCACC AAATCCCGGTCGGTCCCAGACTGCAAGTGCCAAATGCTTTCCCGTCTCCTCCCGCGCCAC CATCACCGCCGCCTCCTCCAAACCCTGTCCAGGGCCGCCGCCGCCGCCCCAGATGTTGAC CTCCACCAGAGGCTGTGCTCTTCGTCTGCAGCGTCAAGCCCGAGCCTGTCGATATGGCGG CGGAAGAAGGAGATGGGCAAGGAGGGCCTCATGGTGGTGGCGCAGCTCAAGCGGCTCGCG GCTCTGCCCCCGGCGGGGGGTCACCCGCGCCTGGAGCAGTTCATGCGTTCGCACGTGTCG CGGCTCCTCCGCACCGACCTCCTCGCCGTCCTCGCCGAGCTCCTCCGCCAGGACCATGTC AGCCTCTCAATGAAGATATATGGTGTTGTGCGGAAAGAAATCTGGTACCGCCCTGACATG TACTTCTACCGTGACATGCTATACATGCTAGCGAGGAACAAGAAAATTAATGAAACAAGG CAGGTATGGGCGGATCTCAAGTCTGAAGACGTGCTATTTGATCAGCACACTTATGGCGAC ATTGTGAGGGCCTTCTGTGATGCTGATTTGATTGACCTTGCAATGGAAATCTATGATGAC ATGAGGAGCTCCCCCGACCCTCCTCTATCATTGCCGTTCCGTGTTATCCTGAAAGGGTTG GTTCCATACCCTGAACTGAGGGAGAAGATAAAGCAGGATTTTCTGGAGCTTTTCCCAGAT ATGATTGTGTATGATCCACCAGATACCTTATCTGATATAGATGAAGAATTCAAGTTTTGA

Peptide Sequence

PEP ID	Zm00001d042519_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:3:170370858:170388068:1 gene:Zm00001d042519 transcript:Zm00001d042519_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MLSHLLPRHHHRRLLQILSRAAAAPDVDLHQRLCSSSAASSTSLSIWWRKKEMGKEGLMA VALLKRLAALPPEPARLLLYCVVAAGFSRGPGAEAPSRGSRPSLLPAQGPHAGGRASRRR GPGKQAVQQAGAAQAAGQASSATSRRMGPGATRDQQPASSAVAARQSMIAAAEANRSANL GSNPRHLCFAPPSSFVLPADLIPAGRRPSHDAWPYLYFSSRGTSPSRDACSLVPSPSSFT KSRSVPDCKCQMLSRLLPRHHHRRLLQTLSRAAAAAPDVDLHQRLCSSSAASSPSLSIWR RKKEMGKEGLMVVAQLKRLAALPPAGGHPRLEQFMRSHVSRLLRTDLLAVLAELLRQDHV SLSMKIYGVVRKEIWYRPDMYFYRDMLYMLARNKKINETRQVWADLKSEDVLFDQHTYGD IVRAFCDADLIDLAMEIYDDMRSSPDPPLSLPFRVILKGLVPYPELREKIKQDFLELFPD MIVYDPPDTLSDIDEEFKF

Transcript Sequence

Transcript ID	Zm00001d042519_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:170370858:170388068:1 gene:Zm00001d042519 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCTTTCCCATCTCCTCCCGCGCCACCATCACCGCCGCCTCCTCCAAATCCTGTCCAGG GCCGCCGCCGCCCCAGATGTTGACCTCCACCAGAGGCTGTGCTCTTCGTCTGCAGCGTCG AGCACGAGCCTGTCGATATGGTGGCGGAAGAAGGAGATGGGCAAGGAGGGCCTCATGGCG GTGGCGCTGCTCAAGCGGCTCGCAGCTCTGCCCCCGGAGCCTGCTCGCCTGCTTCTCTAC TGTGTGGTGGCTGCGGGCTTCTCGCGCGGACCAGGAGCTGAGGCACCGAGCAGGGGCAGC CGGCCGTCACTTCTGCCGGCGCAGGGGCCACATGCGGGCGGCCGGGCAAGCAGGCGCAGG GGGCCGGGCAAGCAAGCAGTGCAGCAAGCAGGCGCAGCGCAGGCGGCCGGGCAAGCAAGC AGCGCAACAAGCAGGCGCATGGGGCCAGGGGCCACACGTGACCAGCAGCCAGCAAGCAGC GCAGTCGCAGCCCGGCAGTCTATGATTGCAGCTGCAGAAGCGAACAGATCTGCCAACCTC GGCTCTAATCCACGACATCTCTGCTTCGCGCCGCCGTCCAGCTTCGTCCTGCCAGCCGAC CTCATCCCCGCCGGCCGTCGCCCCAGCCACGACGCCTGGCCGTACCTGTATTTCTCATCC CGCGGTACAAGCCCCAGCCGAGACGCTTGTAGCCTTGTACCGTCCCCGAGCAGTTTCACC AAATCCCGGTCGGTCCCAGACTGCAAGTGCCAAATGCTTTCCCGTCTCCTCCCGCGCCAC CATCACCGCCGCCTCCTCCAAACCCTGTCCAGGGCCGCCGCCGCCGCCCCAGATGTTGAC CTCCACCAGAGGCTGTGCTCTTCGTCTGCAGCGTCAAGCCCGAGCCTGTCGATATGGCGG CGGAAGAAGGAGATGGGCAAGGAGGGCCTCATGGTGGTGGCGCAGCTCAAGCGGCTCGCG GCTCTGCCCCCGGCGGGGGGTCACCCGCGCCTGGAGCAGTTCATGCGTTCGCACGTGTCG CGGCTCCTCCGCACCGACCTCCTCGCCGTCCTCGCCGAGCTCCTCCGCCAGGACCATGTC AGCCTCTCAATGAAGATATATGGTGTTGTGCGGAAAGAAATCTGGTACCGCCCTGACATG TACTTCTACCGTGACATGCTATACATGCTAGCGAGGAACAAGAAAATTAATGAAACAAGG CAGGTATGGGCGGATCTCAAGTCTGAAGACGTGCTATTTGATCAGCACACTTATGGCGAC ATTGTGAGGGCCTTCTGTGATGCTGATTTGATTGACCTTGCAATGGAAATCTATGATGAC ATGAGGAGCTCCCCCGACCCTCCTCTATCATTGCCGTTCCGTGTTATCCTGAAAGGGTTG GTTCCATACCCTGAACTGAGGGAGAAGATAAAGCAGGATTTTCTGGAGCTTTTCCCAGAT ATGATTGTGTATGATCCACCAGATACCTTATCTGATATAGATGAAGAATTCAAGTTTTGA TGAATGTACGCCTTCATCCGGATTCAGTGCTTCTGAGTTACATTCCCTGCACTGCAGGCA AACCTCCATTTCTCGTTCTTTTGGTGGGCTAGATCAATTGTAAATGTAGCTGTCTCGATC TGCCCAGTAGCTGTGGTACCACCAATTTTAACCTCTTGATGAACCATTTTTGTTAATCTA TGCTTTGGAGAATTGTCTGCTTCCGTCTGTGTCTCGTCCTACTTTGAATCACCTTGTTCT GAAGTTTGGTACTGCTGCTGTGCACTGAGATTTGTGTTCCGTTGATCCCTGCTATATAAT CATTTGTACACTTC