Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042508_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:170134472:170136268:-1 gene:Zm00001d042508 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGATGTGGCGTTCGCGAGCTCGTGCGCTGCTCCTACTCCGCTCGACCATTACCCGGCCA CCGCCACCACCTCCACAACCATATCCCACTCGAACCCTAACCCGAGTCCCACCTCCCCGC TTCCTGTCCTCCTCCCCGGATCCCATCCCCGATTCCTCCTCCGCCGCCGCCGCGGATCCC TTCCCTGAAGCCTTCTCCTCCCCGACCAAGGCTTCTCAAGATGCCGCTGAGGCCGGAGAG GACAACCTGAGCTCGATGTGGGAGGAAGCTGGCCACGCCGACGACATCTTTGCCTCCCCT GGCAGCGCCGACGCCGTAGCCGACGATGAGGAGGTCGCCCGCGTCTGCGCCGCCGTGGAG TCCACCCCCGAGGACGAGATCGCGTCCACCCTCGCTGACATGACCGTGGACTTCAACGAG CCACTCCTAGCCGCAGTCCTCCTTGCTGCTGAACAATGCTCCTGTAAGAAGCTGATTTCC CTGTTCAACTATGCCGCGAAGAATAACCCCGCTTCCAAGAGCCTCTCGAATCTTGAGGTT CTCGTGAGCAAGCTAGCTGATTCTGCTGAGATAGACAAGGCAGACGCTTACTTGCTTTGG GATTCGATTAAGGAAATAGGCTCTGTGTCAGGATCAGTGAGTACACCGTTGTTGAATGAA ATGATTGCCATATTTTGGAAGGTTGAGAAGTCGAAAGCAGCGTTGGAGGTGTTCTCCAAG TTCGATGAGTTTGGTTGCACTCCGGACAGTGACAGCTATTATCTTGTGATTGAAGCAGCA CGAAAGAAGTCCTTGTTCCGCTCTGCTTGTGAAGTCTGTGAGAAGATGATTGGCTCTGCC TGCTTCCCTAATGGTGAGAAGGTTGGCAGGATTTTGATTTACCTTTGTGAGGGGAAGAAG GTGAAGATGGCACACTCATTATATCTTGCAGTGAAGGAAAAAAAGATTCCAGTCCCAAAA CTAGCCTTGGATTTCCTTGTTGGTGCTTTGGCAAGGAATGATGAGACCATTGGTACTGCT CTGGAGCTGCTGGAAGAGTACCAAGGGGAGTCGCTTAAGCATGCAGGCAAGTCCTTTGCC ACAGTTGTACATGCTTTGTGTAGGCTAAACAAAATGGAGGATGCAAATAATTTGTTGATG AGGATGGTGCAGCTTGAAGAGTACAAAGGGGAATCTCTTAAGAATGCAGGCAAGACATTT GCCACAGTTATACATGGTTTGTGTAGGAAAAAGAAATTGGAGGATGCAAAAGCATTGTTG ATGAGGATGGTAAATGTTGGGCCAGCTCCTGGTAATGCAGTGTTTAATTTTGTCATCACA GCATTGTCAAAACAGGGAGAAATGGAGGATGCAAAAGGTTTGATGAGAATGATGGAGAGC CAAGGGATCAGCCCTGATATCTATACTTACAGTGTGCTCATGAGTGGCTACGCGAAAGGA GGCATGATTGATGAAGCCCATGATCTACTTCGTGAAGCTAAGAAAATTCATCCGAAGCTA AACAGGGTTGCTTATCACATACTTATCCGTGGATACTGCAAGATGGAGGACTTCGAGAAG GCCAATGAGTGCCTAAAGGAGATGAAGAAAGATGGGTTGCAGCCAAATGTGGATGAGTAT GACAAACTGATTCAGTCATTGTGTCTCAAGGCTATGGACTGGAGAAGAGCTGAGAAACTC CTGGAGGAAATGGAGGATAGTGGTTTATGCCTAAGGGGTATAAGTCGCAGCCTCATAACT GCAGTTAAGGAGTTGGAAGGGGAGGAAATGCAGTCAAAGGCGAGCCAAGAAGCATAG

Peptide Sequence

PEP ID	Zm00001d042508_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:170134472:170136268:-1 gene:Zm00001d042508 transcript:Zm00001d042508_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MMWRSRARALLLLRSTITRPPPPPPQPYPTRTLTRVPPPRFLSSSPDPIPDSSSAAAADP FPEAFSSPTKASQDAAEAGEDNLSSMWEEAGHADDIFASPGSADAVADDEEVARVCAAVE STPEDEIASTLADMTVDFNEPLLAAVLLAAEQCSCKKLISLFNYAAKNNPASKSLSNLEV LVSKLADSAEIDKADAYLLWDSIKEIGSVSGSVSTPLLNEMIAIFWKVEKSKAALEVFSK FDEFGCTPDSDSYYLVIEAARKKSLFRSACEVCEKMIGSACFPNGEKVGRILIYLCEGKK VKMAHSLYLAVKEKKIPVPKLALDFLVGALARNDETIGTALELLEEYQGESLKHAGKSFA TVVHALCRLNKMEDANNLLMRMVQLEEYKGESLKNAGKTFATVIHGLCRKKKLEDAKALL MRMVNVGPAPGNAVFNFVITALSKQGEMEDAKGLMRMMESQGISPDIYTYSVLMSGYAKG GMIDEAHDLLREAKKIHPKLNRVAYHILIRGYCKMEDFEKANECLKEMKKDGLQPNVDEY DKLIQSLCLKAMDWRRAEKLLEEMEDSGLCLRGISRSLITAVKELEGEEMQSKASQEA

Transcript Sequence

Transcript ID	Zm00001d042508_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:170134472:170136268:-1 gene:Zm00001d042508 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGATGTGGCGTTCGCGAGCTCGTGCGCTGCTCCTACTCCGCTCGACCATTACCCGGCCA CCGCCACCACCTCCACAACCATATCCCACTCGAACCCTAACCCGAGTCCCACCTCCCCGC TTCCTGTCCTCCTCCCCGGATCCCATCCCCGATTCCTCCTCCGCCGCCGCCGCGGATCCC TTCCCTGAAGCCTTCTCCTCCCCGACCAAGGCTTCTCAAGATGCCGCTGAGGCCGGAGAG GACAACCTGAGCTCGATGTGGGAGGAAGCTGGCCACGCCGACGACATCTTTGCCTCCCCT GGCAGCGCCGACGCCGTAGCCGACGATGAGGAGGTCGCCCGCGTCTGCGCCGCCGTGGAG TCCACCCCCGAGGACGAGATCGCGTCCACCCTCGCTGACATGACCGTGGACTTCAACGAG CCACTCCTAGCCGCAGTCCTCCTTGCTGCTGAACAATGCTCCTGTAAGAAGCTGATTTCC CTGTTCAACTATGCCGCGAAGAATAACCCCGCTTCCAAGAGCCTCTCGAATCTTGAGGTT CTCGTGAGCAAGCTAGCTGATTCTGCTGAGATAGACAAGGCAGACGCTTACTTGCTTTGG GATTCGATTAAGGAAATAGGCTCTGTGTCAGGATCAGTGAGTACACCGTTGTTGAATGAA ATGATTGCCATATTTTGGAAGGTTGAGAAGTCGAAAGCAGCGTTGGAGGTGTTCTCCAAG TTCGATGAGTTTGGTTGCACTCCGGACAGTGACAGCTATTATCTTGTGATTGAAGCAGCA CGAAAGAAGTCCTTGTTCCGCTCTGCTTGTGAAGTCTGTGAGAAGATGATTGGCTCTGCC TGCTTCCCTAATGGTGAGAAGGTTGGCAGGATTTTGATTTACCTTTGTGAGGGGAAGAAG GTGAAGATGGCACACTCATTATATCTTGCAGTGAAGGAAAAAAAGATTCCAGTCCCAAAA CTAGCCTTGGATTTCCTTGTTGGTGCTTTGGCAAGGAATGATGAGACCATTGGTACTGCT CTGGAGCTGCTGGAAGAGTACCAAGGGGAGTCGCTTAAGCATGCAGGCAAGTCCTTTGCC ACAGTTGTACATGCTTTGTGTAGGCTAAACAAAATGGAGGATGCAAATAATTTGTTGATG AGGATGGTGCAGCTTGAAGAGTACAAAGGGGAATCTCTTAAGAATGCAGGCAAGACATTT GCCACAGTTATACATGGTTTGTGTAGGAAAAAGAAATTGGAGGATGCAAAAGCATTGTTG ATGAGGATGGTAAATGTTGGGCCAGCTCCTGGTAATGCAGTGTTTAATTTTGTCATCACA GCATTGTCAAAACAGGGAGAAATGGAGGATGCAAAAGGTTTGATGAGAATGATGGAGAGC CAAGGGATCAGCCCTGATATCTATACTTACAGTGTGCTCATGAGTGGCTACGCGAAAGGA GGCATGATTGATGAAGCCCATGATCTACTTCGTGAAGCTAAGAAAATTCATCCGAAGCTA AACAGGGTTGCTTATCACATACTTATCCGTGGATACTGCAAGATGGAGGACTTCGAGAAG GCCAATGAGTGCCTAAAGGAGATGAAGAAAGATGGGTTGCAGCCAAATGTGGATGAGTAT GACAAACTGATTCAGTCATTGTGTCTCAAGGCTATGGACTGGAGAAGAGCTGAGAAACTC CTGGAGGAAATGGAGGATAGTGGTTTATGCCTAAGGGGTATAAGTCGCAGCCTCATAACT GCAGTTAAGGAGTTGGAAGGGGAGGAAATGCAGTCAAAGGCGAGCCAAGAAGCATAG