Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042468_T022
CDS Infomation	cds chromosome:B73_RefGen_v4:3:168626536:168632934:1 gene:Zm00001d042468 gene_biotype:protein_coding transcript_biotype:protein_coding description:Structural maintenance of chromosomes protein 2-2
Sequence	ATGCAAGGGCGCATAACAAAAGTGCTGAACATGAAGCCTCCAGAAATTTTGTCAATGTTA GAAGAGGCAGCAGGTACAAGAATGTACGAAATGAAGAAAGAATCTGCTCTTAAGACACTT GAAAAGAAGCAGAATAAAGTTGATGAGATTAATAAACTCCTTGATGTTGAAATCCTCCCT GCACTAGAGAAACTTAGAAAAGAGCGGTGTCAATACATGAAATGGGCCAATGGCAATGCT GAACTGGATAGGCTCAAAAGATTTTGTATTGCCTATGACTTTGTTCAGGCTGAGAGAGTG CGAGATGGCGCACTGAATGATGTCAAACAAATTAAAACAAAGATTGTTGAGCTGGATGAA ACTACAGAAAACATAAAAGCAGCTATACAAGAAATGGACAATAACATTTCTACCTTGGCT GCTGAAAAAGAAGCTAAAGTAGGTGGTGAAATGAAGGTTCTGTCAGACAAAGTGGATAAA CTATCACATGTACTTATCAAGGAAACTTCTGTGATGAATAATCAAGAGGAAACCCTGAAG TCTGAGGAAAAGGGTGCTGAGAAGATTCTCACAAACATTGAGGACATAAAAAGGTCTATA CTCGAGAGAGATGCTGCTGTAAAAAATGTAGAGAATGAGGCTTCTGACATGAAAAGAAGA GCAGAGGATCTCACAAAGGAGTTGGACGAGAAGGAGAAAGAATACCAGGGTGTGCTAGCA GGAAAAAGCAGTGCAAATGAGAAGAAATGCCTTGAAGATCAACTGAGAGATGCAAAAGCT GCAGTTGGAGATGCAGAATCTGGACTAAAGCAGCTAGCTACAAAAATAAAGCATTCTGAA AAGGAGTTGAAGGAGAAGAAAACTCTATTAGTATCCAAGCGTGATGAGGCTATTGCTGCT GAGAATGAGCTGAAAACAAGGACAAAAGACTTAGAAGGTATCAAGGCATCCATGGGATCT ATTAATTATGACGAGGGTCAGATGGAAGCTTTGCAAAAGGACCGTTCTGCAGAGTTAGAA ATTATTCAAAAATTAAAGGATCGTGTTCGTAACCTTTCTGGTGAGCTTGCTAATGTTCAC TTCAGTTATCGAGACCCTGAAAGAAATTTTGACAGATCAAAAGTCAAAGGGGTTGTTGCA CGTCTTATTAGGATTAAGGACAGCTCAACAGCAACAGCACTGGAGGTTGCTGCAGGTGGG AGGTTATTCAATGTGGTTGTTGACACTGAAGAAACTGGAAAGCAACTTTTAAAAAATGGG GATCTACGAAGTAGAGTAACCATCATACCTTTGAACAAAATCCAAACTTACATGATACCT GACAGAGTTCAGCAGACAGCTCGTAGACTGGTTGGTCCTGACAATGTAACATTAGCTCTA GAATTGGTTGGATATGGTGAGGAAGTAAAGAATGCCGTGGCTTTTGTCTTTGGCTCAACA TTTGTGTGTCGTAATATGGATGCGGCAAAAGAGGTTGCGTTTAATAGGCAAATTAGCAGT ACTAGTGTGACTCTTGAGGGTGACACTTATCAGCCAAGTGGTCTTTTGACTGGAGGTAGT AAAGGGGGTAGAGGGAACTTGCTAAGGAAACTCGACGAACTAGCTAAAGCTGAGGCTGAT CTATCTGATCATGAGAAAAAGCTCTTTGTCATTGAACAGCAGGTATTCTGGCATTCTGCA ATGCACAATGTCCGCACATGA

Peptide Sequence

PEP ID	Zm00001d042468_P022
PEP Infomation	pep chromosome:B73_RefGen_v4:3:168626536:168632934:1 gene:Zm00001d042468 transcript:Zm00001d042468_T022 gene_biotype:protein_coding transcript_biotype:protein_coding description:Structural maintenance of chromosomes protein 2-2
Sequence	MQGRITKVLNMKPPEILSMLEEAAGTRMYEMKKESALKTLEKKQNKVDEINKLLDVEILP ALEKLRKERCQYMKWANGNAELDRLKRFCIAYDFVQAERVRDGALNDVKQIKTKIVELDE TTENIKAAIQEMDNNISTLAAEKEAKVGGEMKVLSDKVDKLSHVLIKETSVMNNQEETLK SEEKGAEKILTNIEDIKRSILERDAAVKNVENEASDMKRRAEDLTKELDEKEKEYQGVLA GKSSANEKKCLEDQLRDAKAAVGDAESGLKQLATKIKHSEKELKEKKTLLVSKRDEAIAA ENELKTRTKDLEGIKASMGSINYDEGQMEALQKDRSAELEIIQKLKDRVRNLSGELANVH FSYRDPERNFDRSKVKGVVARLIRIKDSSTATALEVAAGGRLFNVVVDTEETGKQLLKNG DLRSRVTIIPLNKIQTYMIPDRVQQTARRLVGPDNVTLALELVGYGEEVKNAVAFVFGST FVCRNMDAAKEVAFNRQISSTSVTLEGDTYQPSGLLTGGSKGGRGNLLRKLDELAKAEAD LSDHEKKLFVIEQQVFWHSAMHNVRT

Transcript Sequence

Transcript ID	Zm00001d042468_T022
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:168626536:168632934:1 gene:Zm00001d042468 gene_biotype:protein_coding transcript_biotype:protein_coding description:Structural maintenance of chromosomes protein 2-2
Sequence	ATATGAAACTGGAGTTCTGTTAATGGGTGTTCTAACAACTGATTATTTTTTCTTAAGAGT AATCAGGAACTACAAAGTTGCTTATAATGGTACTGGATTTGTTCATATTTTGTTGATGCT CAATCTAGCGGACACATTTTTTTAGTCAAACAATTCATTGTAAATATAAGATGTTTTGGC TTTTCTAGACACACCACTTTTGTTATGTATCTAGATATAGTGTATATCTAAGTGCATAGC AAAAACTACGTACTAAAAAAACCAAACTTCGTATAATTTAAAATGGAGGGATTACTTTGC TTCTCAATGGTGTGTGTCGACGTTTTGTGCCTAGTGATTCATGATATTATTCACAGATAA AATTTTGAAATTATTTTAGGTCCATGAGTTTAATTCTACTGAAATGGTGCTATTTAGGTT GATGTGGAGTGAATATATATAGCTGAGTGTTGTGGGCCAAGGCCCATTACAATGGAGGTA TACACAGAGACGTAAACAACACTCTAACAACTTGATTAATTCATAAAATGGCTGATAGAT CGGCTTCACTCATATGTTCTTTGCACTTTGATTCTACCTATTTGTTTCAAAACGTTTTGT GTTGTTTCTGGTGAACCAATTTCGTCCCAATTTTACTGGGCATCAGTTAATTGTTGTCCT GTATTTGTAGATTGTTGTTGGTGGAAGGAACAAATACCTTATCAATGGCCATCTTGCACA ACCTTCCCGGGTGCAGACCCTTTTCCACTCAGTGCAGCTTAATGTAAACAATCCTCATTT TCTAATTATGCAAGGGCGCATAACAAAAGTGCTGAACATGAAGCCTCCAGAAATTTTGTC AATGTTAGAAGAGGCAGCAGGTACAAGAATGTACGAAATGAAGAAAGAATCTGCTCTTAA GACACTTGAAAAGAAGCAGAATAAAGTTGATGAGATTAATAAACTCCTTGATGTTGAAAT CCTCCCTGCACTAGAGAAACTTAGAAAAGAGCGGTGTCAATACATGAAATGGGCCAATGG CAATGCTGAACTGGATAGGCTCAAAAGATTTTGTATTGCCTATGACTTTGTTCAGGCTGA GAGAGTGCGAGATGGCGCACTGAATGATGTCAAACAAATTAAAACAAAGATTGTTGAGCT GGATGAAACTACAGAAAACATAAAAGCAGCTATACAAGAAATGGACAATAACATTTCTAC CTTGGCTGCTGAAAAAGAAGCTAAAGTAGGTGGTGAAATGAAGGTTCTGTCAGACAAAGT GGATAAACTATCACATGTACTTATCAAGGAAACTTCTGTGATGAATAATCAAGAGGAAAC CCTGAAGTCTGAGGAAAAGGGTGCTGAGAAGATTCTCACAAACATTGAGGACATAAAAAG GTCTATACTCGAGAGAGATGCTGCTGTAAAAAATGTAGAGAATGAGGCTTCTGACATGAA AAGAAGAGCAGAGGATCTCACAAAGGAGTTGGACGAGAAGGAGAAAGAATACCAGGGTGT GCTAGCAGGAAAAAGCAGTGCAAATGAGAAGAAATGCCTTGAAGATCAACTGAGAGATGC AAAAGCTGCAGTTGGAGATGCAGAATCTGGACTAAAGCAGCTAGCTACAAAAATAAAGCA TTCTGAAAAGGAGTTGAAGGAGAAGAAAACTCTATTAGTATCCAAGCGTGATGAGGCTAT TGCTGCTGAGAATGAGCTGAAAACAAGGACAAAAGACTTAGAAGGTATCAAGGCATCCAT GGGATCTATTAATTATGACGAGGGTCAGATGGAAGCTTTGCAAAAGGACCGTTCTGCAGA GTTAGAAATTATTCAAAAATTAAAGGATCGTGTTCGTAACCTTTCTGGTGAGCTTGCTAA TGTTCACTTCAGTTATCGAGACCCTGAAAGAAATTTTGACAGATCAAAAGTCAAAGGGGT TGTTGCACGTCTTATTAGGATTAAGGACAGCTCAACAGCAACAGCACTGGAGGTTGCTGC AGGTGGGAGGTTATTCAATGTGGTTGTTGACACTGAAGAAACTGGAAAGCAACTTTTAAA AAATGGGGATCTACGAAGTAGAGTAACCATCATACCTTTGAACAAAATCCAAACTTACAT GATACCTGACAGAGTTCAGCAGACAGCTCGTAGACTGGTTGGTCCTGACAATGTAACATT AGCTCTAGAATTGGTTGGATATGGTGAGGAAGTAAAGAATGCCGTGGCTTTTGTCTTTGG CTCAACATTTGTGTGTCGTAATATGGATGCGGCAAAAGAGGTTGCGTTTAATAGGCAAAT TAGCAGTACTAGTGTGACTCTTGAGGGTGACACTTATCAGCCAAGTGGTCTTTTGACTGG AGGTAGTAAAGGGGGTAGAGGGAACTTGCTAAGGAAACTCGACGAACTAGCTAAAGCTGA GGCTGATCTATCTGATCATGAGAAAAAGCTCTTTGTCATTGAACAGCAGGTATTCTGGCA TTCTGCAATGCACAATGTCCGCACATGAATTTTATTATTCTTATTACTGTTTGAATTCAT ATGGATTTATTTGCAGGATATATTCATGTCCTTTTGCTTATAAACTGCTGTTCTATTATG TTAACTTGAAGCTTGTAAATTTCATTAATATTTATGTTTGGTCATAAGATTTAAAGAATA CCATGAGACATGATGCAGATTTACACCATCGAATGCTTAATGGCAAAACATTTTGCTTGC AAAGTAATTCTTGTAATGGGACACATTCTTTGATATAGCCCTGTTTGGCACAACTTATTT TCAGCTTCTTCACAGATTTAAGCAGAAGATGTGCCAAACAGGAAGCTTGCTTATCAGTTC AGCTGCTTCTCAGAATGAACTAAAAGCAGACAATAAGCAGAAGCTGTTTTTTCACTAGCT TCTCAGATAATCTGTTTTTTCAATAAGTAGCAGCTATGCCAAACAGGGCCATAAGCTTAG TCAAACATTGGAGCCCTTTTACCATTGCAGAAAAGGCACACTGAGTTGAAATCTCAGTTT GAACTGAAGTCATATGATCTCTCGCTGTTTCAGAACAGAGTTGAGCAAAATGAACATCAC AAGTTAGGTGAGCTCGTAAAGAAAATTGAACAAGAGCTTCAAGAATCTAAACAAGAGTTG ACAGAAAAGCAAGTGCAGCATGAAAAATGTGTGTCCACAGTTTCTGAGTTAGAGAAAACT ATCAAAACTTATGGCACGGAACGAGAGGGCAAACTCAAAGCGCTGGAAAAAAGAATCAAA TCAATTAAATCAGAGATGCAGTCGATGTCGAAGCAACTAAAGGTTGTTTACTTTCTTATT CTTGCCACCATACCAGGAGTATTTTATTGCTTAATATATGAAGAATTTTCAATAAATGAT TTTTTCCTTGTTATGGACATGTTGATCTATGGGAATAGTTGCGGAAGAATTCTGGATGTT GACCCTGGACCTAGTTGGTATGACTTAGGAGTCATGATTGACTACGGCACTGGCTATGCA GGCATAAAAGAAACTGGGGCAAATGGTCAATCTGATTGCTTAAATGCAAAATACTGCTAG TCTCCCCCTACATTGAGTTAGTCTGGCAGTAAATAACTCAATCGGATGGGGCTCAAGCCC CCTACTGTCTCTGCAACCATGGAACGCCCCCTTGCAACTTGCAAGTGAGGTCCCACATTA CATTTGTCTTTGCTCTAACTCATATTTGTCTTGTAATTCAAGTAGTTTGATAGGCAGTAT TATTTCTTGATACGTACTACCTCTGTTCTAAATTATGTCATTTTAGCTTTGTCCTAAGTC AAACTTCTTATGTTTTACCCAAGTTTATAGAAAAATTATACTAAAGTCTACAGCATTGAA TTAGTTTTGTTAAGTTCCCAATAAAACATGTCTTGATAGCGCAATTATTTTGAAATTTAG ATGTTAACATGTTTTTCTGTAAGCTTGATCAAAGTTAGAGATGTTTGACTAGGACAACAA AATTGACATGATTTGGATAGGACGATAGGTAGTATTTTCTTAAAGATGCACATAGCTGAA AAATATGAGTTTCGTCCATTACCATGAGTTAGTCACAAATTCTTTAGTAAGATACGTTCA ATTTTAAAAGTTAAGTATGTGATTTGCTTTGATGAAGATACTGGACATCTTTCATAAGAG GTATATTAAGATCAGTTCTGTTGAATTCTTACTCTGATAGTGGCCATAACTTGGTTCTTT TATCAGTTTATGTCTACTTTAACAGTCATCCTGACAATTTGATCTTTAATATATCCCATA TTTAGGCTTATGAAAGTGACAGGGAGAGGCTGATCATGGAGAAAGATGCGGTTGTTGGTG AGCTTGCTACACTGGAAGAGCAGCTAACGACTTCAAAAGCTCAGATTACTTCTCTGTCTG AAACCTTGGAAAAACAGAAGGACAAGGTTACATCCATAAAGCAAGATTATGATCAAGCTG AAAGTGAGCTCAACGTTGGGCGTTCTAAACTGAAGGAATGTGACTCACAGATAAACCGTA TGGCCAAGGAACAGCAGAAACTTCAACAGAAGTTAAGTGATTCAAATGT