Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042451_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:3:168249814:168260477:1 gene:Zm00001d042451 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 53 A
Sequence	ATGGACAAGTCCAGCGCTCTCGAATACATCAACCAGATGTTCCCCACTGAGGCGTCGTTG TCGGGCGTGGAGCCGCTGATGCAAAAGATACAGAGCGAGATTCGCAGAGTGGACGCCAGC ATCCTTGCTGCTGTCCGACAGCAGAGCAACTCGGGAACCAAGGCCAAGGAAGAACTTGCT GCTGCAACAAATGCTGTTCAGGAATTAATGCATAAGATACATGAAATAAAAACAAAGGCT GAGCAAAGTGAAACTATGGTTCAAGAAATCTGTCGCGACATCAAAAAGTTGGATTGTGCT AAGAGGCACATAACAACTACAATAACCGCTCTTCACCGTCTTACTATGCTTGTTTCGGCT GTTGAGCAACTTCAGGTTATGGCATCAAAACGGCAGTATAAAGAAGCATCTGCACAGCTG GAGGCAGTGAACCAACTATGCAGTCATTTTGAAGCCTATAGAGATGTGCCCAAGATAACA GAATTGAGAGAGAAATTCAAGAACATCAAGAAAATCCTCAAATCTCATGTATTTTCAGAT TTTTCAAGCTTAGGAACTGGGAAGGAAACAGAAGATTCCATGCTATTGCAGCAGCTATCT GATGCTTGTTTGGTGGTTGATGCATTGGAACCATCTGTAAGGGAAGAACTAGTGAAGAAC TTTTGCAGCAAGGAACTCACCTCATATAGGCAGATCTTTGAAGGAGCAGAACTTGCCAAG TTAGACAAGACCGAAAGAAGATATGCATGGATTAAACGTCGACTAAGGTCAAATGAAGAC ACCTGGAAAATATTTCCACCTTCCTGGCATGTCGACTATCTGCTGTGTATCCAGTTCTGT AAGATTACAAGGGCCCAGCTTGTTGATATCCTTAATAATCTCAAAGAAAAACCAGATGTT GCAACTTTGTTATTGGCGTTCCAGAGAACCATTGAATTTGAGGAAGAATTGGCAGAGAAA TTCAGTGGTGGAACTACAAATGCTAGAAATAAAGAGACAACAAGTGATGATGAAGATGAG GGTGGGGGACACAATAAAATTGTTTCGGACATACGAAAGAAATATGAGAAGAAATTGGCT GCACCCAGTGATGAGGACAAAGATAAGCAGAAAGATTTGTCAGTTCCTGGTGCTGGGTTC AACTTTCATGGGATCATATCTTCTTGTTTTGAACCATATATGACTGTATACATTGAACTT GAGGAGAAATCTTTAGTGGATCAATTAGAAAAACTTGTCCAGGAAGAAAGATGGGAAATC GAGGAAGGAAGTCAGACGAACATTCTATCAAGCAGCATGCAGGTTTTCTTGGTGATTAGA AAAAGCTTAAAGAGGTGCAGCGCATTAACAAAGAACCAAACATTGTTCAACTTATTTCAG GTATTTCAAAGAATACTCAAGGCCTATGCGGCTAAGTTATATGCCAGATTACCAAAAGGT GGAACTGGTATTGTTGCAGCTGCCACTGGCACTGATGGACAGATCAGGACCTCAGACAGG GACGAGAGAATGATATGCTACATTGTCAACACTGCTGAATATTGTCATCAGACACTTTCT CTATAA

Peptide Sequence

PEP ID	Zm00001d042451_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:3:168249814:168260477:1 gene:Zm00001d042451 transcript:Zm00001d042451_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 53 A
Sequence	MDKSSALEYINQMFPTEASLSGVEPLMQKIQSEIRRVDASILAAVRQQSNSGTKAKEELA AATNAVQELMHKIHEIKTKAEQSETMVQEICRDIKKLDCAKRHITTTITALHRLTMLVSA VEQLQVMASKRQYKEASAQLEAVNQLCSHFEAYRDVPKITELREKFKNIKKILKSHVFSD FSSLGTGKETEDSMLLQQLSDACLVVDALEPSVREELVKNFCSKELTSYRQIFEGAELAK LDKTERRYAWIKRRLRSNEDTWKIFPPSWHVDYLLCIQFCKITRAQLVDILNNLKEKPDV ATLLLAFQRTIEFEEELAEKFSGGTTNARNKETTSDDEDEGGGHNKIVSDIRKKYEKKLA APSDEDKDKQKDLSVPGAGFNFHGIISSCFEPYMTVYIELEEKSLVDQLEKLVQEERWEI EEGSQTNILSSSMQVFLVIRKSLKRCSALTKNQTLFNLFQVFQRILKAYAAKLYARLPKG GTGIVAAATGTDGQIRTSDRDERMICYIVNTAEYCHQTLSL

Transcript Sequence

Transcript ID	Zm00001d042451_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:168249814:168260477:1 gene:Zm00001d042451 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 53 A
Sequence	CCCGTTGAACGGCCGAGCTGCCAACGACGGGGAGTAGTACCCGCCGGCGATTCCACCTCT CTCGCCACCACCTCCCCTCGCGTGCGCGAGGGGAAGCCCGGCGCCCGTTCGCCGCCAGAT CAGCTCCTCCGCACCACCCTCCCCTTCCAGATCCTTCTAGACCTCGCCAGATCCTCCGAG CGCGGGCGCGCGGGGCGGAGATCTCGCCGGAGAAATGGACAAGTCCAGCGCTCTCGAATA CATCAACCAGATGTTCCCCACTGAGGCGTCGTTGTCGGGCGTGGAGCCGCTGATGCAAAA GATACAGAGCGAGATTCGCAGAGTGGACGCCAGCATCCTTGCTGCTGTCCGACAGCAGAG CAACTCGGGAACCAAGGCCAAGGAAGAACTTGCTGCTGCAACAAATGCTGTTCAGGAATT AATGCATAAGATACATGAAATAAAAACAAAGGCTGAGCAAAGTGAAACTATGGTTCAAGA AATCTGTCGCGACATCAAAAAGTTGGATTGTGCTAAGAGGCACATAACAACTACAATAAC CGCTCTTCACCGTCTTACTATGCTTGTTTCGGCTGTTGAGCAACTTCAGGTTATGGCATC AAAACGGCAGTATAAAGAAGCATCTGCACAGCTGGAGGCAGTGAACCAACTATGCAGTCA TTTTGAAGCCTATAGAGATGTGCCCAAGATAACAGAATTGAGAGAGAAATTCAAGAACAT CAAGAAAATCCTCAAATCTCATGTATTTTCAGATTTTTCAAGCTTAGGAACTGGGAAGGA AACAGAAGATTCCATGCTATTGCAGCAGCTATCTGATGCTTGTTTGGTGGTTGATGCATT GGAACCATCTGTAAGGGAAGAACTAGTGAAGAACTTTTGCAGCAAGGAACTCACCTCATA TAGGCAGATCTTTGAAGGAGCAGAACTTGCCAAGTTAGACAAGACCGAAAGAAGATATGC ATGGATTAAACGTCGACTAAGGTCAAATGAAGACACCTGGAAAATATTTCCACCTTCCTG GCATGTCGACTATCTGCTGTGTATCCAGTTCTGTAAGATTACAAGGGCCCAGCTTGTTGA TATCCTTAATAATCTCAAAGAAAAACCAGATGTTGCAACTTTGTTATTGGCGTTCCAGAG AACCATTGAATTTGAGGAAGAATTGGCAGAGAAATTCAGTGGTGGAACTACAAATGCTAG AAATAAAGAGACAACAAGTGATGATGAAGATGAGGGTGGGGGACACAATAAAATTGTTTC GGACATACGAAAGAAATATGAGAAGAAATTGGCTGCACCCAGTGATGAGGACAAAGATAA GCAGAAAGATTTGTCAGTTCCTGGTGCTGGGTTCAACTTTCATGGGATCATATCTTCTTG TTTTGAACCATATATGACTGTATACATTGAACTTGAGGAGAAATCTTTAGTGGATCAATT AGAAAAACTTGTCCAGGAAGAAAGATGGGAAATCGAGGAAGGAAGTCAGACGAACATTCT ATCAAGCAGCATGCAGGTTTTCTTGGTGATTAGAAAAAGCTTAAAGAGGTGCAGCGCATT AACAAAGAACCAAACATTGTTCAACTTATTTCAGGTATTTCAAAGAATACTCAAGGCCTA TGCGGCTAAGTTATATGCCAGATTACCAAAAGGTGGAACTGGTATTGTTGCAGCTGCCAC TGGCACTGATGGACAGATCAGGACCTCAGACAGGGACGAGAGAATGATATGCTACATTGT CAACACTGCTGAATATTGTCATCAGACACTTTCTCTATAAATTTTACAGTCAGGTGAGCT AGCTGAGAATGTTGCTAAGATGATTAACCCTCAGTTTGCTGACAAGGTGGACATGTCTGA AGTTCAGGATGAATTCTCAGCCGTGATCACAAAAGCACTAATGACTCTTGTTCACGGACT TGAAACCAAATTTGATGCTGAAATGGTTGCAATGACTCGCGTTCCATGGGCTACCCTTGA AAGCGTTGGTGATCAATCAGAATATGTGAATGGTATCAGCTCTATTCTGTCAAGCAGTAT TCCTGTGCTTGGTACCCTGCTTTCACCTACCTACTTCCAGTATTTCCTGGACAAACTTGC AGCATCTCTTGGGCCTCGGTTTTATCTCAACATATACAAGTGCAAACATATATCAGAAAC TGGTGCACAGCAGATGCTTTTGGACACCCAAGCAGTAAAGACTATTCTCCTAGACATCCC AGCTCTTGGAAAACAGAGTACAGGTGCAGCTAGCTACTCGAAATTTGTCAGCCGAGAAAT GGGTAAAGCCGAAGCTCTACTTAAGGTCATTTTGTCGCCAGTTGATTCTGTCGCTAACAC ATACCGTGCCCTCCTTCCCGAAGGCACGCCTCTTGAGTTTCAGCGGATACTTGACCTCAA GGGCTTGAAGAAAGCAGACCAACAAGCTATCCTGGAGGACTTCAACAAACACGCCCCTGC ACCAGCCCCCGCCATCAAACACCCTGCCGTTGCTCCGACGGTGGCGACACCAGTTGCCAC AGCATCTGTCCAGATTGTGCCCTCGGTGGCAACTCCAGCTGTTTCGATTACACCAAGCAT GGCCTCCTTGAAGGGAGCACTGGCGAACCAAGAGGACGTCCTCGCCCGAGCTGCCGCCCT TGGGCGCGGAGCAGCCACCACGGGCTTCAAGAGGTTCCTTGCATTGACAGAGGCCGCCAA AGATCGCAAGGATGGGCCGTTCCGCAAGCTCTTCAACGCCTAAAATGTCGCTCACCGTTG TGTTCATAGTTCGTGCCCCTCGTGCAGTGAACATAGATATAGGAAATCCTTTCCACATCG TGTACACACCATTACCGTTAACCGACAGTCTATAACAACCATTTTGACAGATTATCCTAT CCCATCCTGCGGAGAACGATTAGCTCAGTTGTAGCATAGAGATTTTGAGACAGTTTGAGC TATTAGATAAGTTTTTCCCCCTGGTTTTGTGC