Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042410_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:3:166271607:166276507:-1 gene:Zm00001d042410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAACTATATCTTGACAGTTGGCTTCAGGCTGCTCTTAATCCAGGGATTGAAGAACTC
ACCCTCTGGTTGTTCCATACAAGGAGAATATATGAATTCCCATGCTCACTTTTATCTGAT
GGGGTTCGAAATTCACTTCGGTACCTTAAACTTCGTTGTTGTGCTCTCCGTCCCACAGTT
GAACTTGCCCCCATGAGAAGCCTAACAAGTTTACATTTGTCCTTTGTGAGCATTAAATGG
GATGGGTTAAAGCGCCTCCTTTCCAACTCCCTTGCTCTGGAGGAATTAGAGCTAGTATGT
TGTGACAAGATCGTTTGCCTCAAGATACCTTCTGCCCTGCAGCGTCTCAACAGCCTTAAT
ATTTTTGGATGCTCGGCCCTCAAAGTGCTAGAGAGCAAAGCTCCAAATCTCTCTAGTCTT
TCTCTTTTACATTTTGGAGGCAGGCTAGTCTTCTCACGTGTGAAAACATTGCAAATGAAG
AAACTAATCACTGAAAGTACTGTCTATGATGCTCGTACCAGGCTGCCATCCATTATGCCC
AATCTTGAAACTCTTGTCATAAACTCATTTGATTGGGTTGTTGATGCACCAATGCTGCCT
ACCAAATTCCTCTGTCTTAAGCACCTGATCGTTCGCTTGTCATTAGGAACAACCATTACC
CAGGCATTTGACTATTTCTCTTTGGTTTCTTTCCTTGATGCGTCTCCTTCCTTGGAGACT
TTTATATTAAATGTGAGTGAGAAAGGCATGATCCATGAATCAATTTCTGCGCATCCACAA
TTGAGGCACACACCTGAGCACCACCATGGCCACCTCAGGAGTGTGAAGATATGTGGTTTC
AGCTCTGAGAAAAGCTTATTTGAACTAACACGTTATATTCTTGAGAATGCGGTGTCACTG
AAATTTCTTACACTGGACACCTTTTATGGGGATCGGTGTGGTCAGGGTAAGTGTACAAGT
TGTTTACCCACGCCTGATGTTTTTATGGATGTTTCCAAAGCGATCTCAGGTATCAAGACA
TACATCGAGAACAAAGTTCCATCCACAGTTAAACTAACTGTTCTGGAGCCTTGCAGCCGG
TGCCATGTTAGAAGAGTAATTTAG

Peptide Sequence

PEP ID

Zm00001d042410_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:3:166271607:166276507:-1 gene:Zm00001d042410 transcript:Zm00001d042410_T008 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MELYLDSWLQAALNPGIEELTLWLFHTRRIYEFPCSLLSDGVRNSLRYLKLRCCALRPTV
ELAPMRSLTSLHLSFVSIKWDGLKRLLSNSLALEELELVCCDKIVCLKIPSALQRLNSLN
IFGCSALKVLESKAPNLSSLSLLHFGGRLVFSRVKTLQMKKLITESTVYDARTRLPSIMP
NLETLVINSFDWVVDAPMLPTKFLCLKHLIVRLSLGTTITQAFDYFSLVSFLDASPSLET
FILNVSEKGMIHESISAHPQLRHTPEHHHGHLRSVKICGFSSEKSLFELTRYILENAVSL
KFLTLDTFYGDRCGQGKCTSCLPTPDVFMDVSKAISGIKTYIENKVPSTVKLTVLEPCSR
CHVRRVI

Transcript Sequence

Transcript ID

Zm00001d042410_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:166271607:166276507:-1 gene:Zm00001d042410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGCCACGTGCCCTACTGCTCTCCATCCTCCAGCGCTGTCCACACGAGGTCGTCCTTGTGC
AGCAGGCACAGCTCGGCGGGCTCCATCGGGGAGGCCATACCGCAGCGGAGCGCAAGGCCG
GCCGCGTCGTTGGGGAGCGATGGATGCACGCAGCTGGTGATGAATCGAAACCTATCGCGT
AGGACAGTTCGGCTAGGCCGGAGACCTGCCGGCTTGACGGAGAGTTGATGCAGATCTGAT
CCCGCAGCAACGTCGAGGACATTTGGCATGCCACGAACGACTGTCGCCCCTCCTCGGTCC
CAACGCGACGAGCAGGCAGCTGCAACGCGTGAAATACGGGCACAACAGTACCACGCGACG
TCAAATACGGGCACAACTCGTGAACGACGGCGGCGCCTAGCGGCGACATCGTCCCCCTCG
ACTCCTCCTCCATCCCCGATGCGGCGCGCCAGCCTGCAGATTAGCTTATTACCTCCATGG
GTAAAAGAAAGCGGTCGTTGTGTCAACAAGATAACCATAATGATTCTCTAGCCAGCAAAA
TAATGAGAACTAGAATCCCAGATCTTCCTGAGGACATTTGGTCTCATGTACATTCCCTAA
TGCCAATGCGTGATGCTGGCCGTGCTGCTTGCCTATCTCGTGCCTTTTTACGTTCCTGGA
GACGTCATCCTAATCTTATCTTTAATAAGGATACGATTGGCATGAAAAAAAATTCATATG
GAGAGAATTTCCACCACAAAATTAGCCGCATTCTCAGGAATCACTCTGGCATTAGTTTGA
AAACATTCAAGCTTGACTACAGTGGCATGTGTGGGTTCGATGGAACTATATCTTGACAGT
TGGCTTCAGGCTGCTCTTAATCCAGGGATTGAAGAACTCACCCTCTGGTTGTTCCATACA
AGGAGAATATATGAATTCCCATGCTCACTTTTATCTGATGGGGTTCGAAATTCACTTCGG
TACCTTAAACTTCGTTGTTGTGCTCTCCGTCCCACAGTTGAACTTGCCCCCATGAGAAGC
CTAACAAGTTTACATTTGTCCTTTGTGAGCATTAAATGGGATGGGTTAAAGCGCCTCCTT
TCCAACTCCCTTGCTCTGGAGGAATTAGAGCTAGTATGTTGTGACAAGATCGTTTGCCTC
AAGATACCTTCTGCCCTGCAGCGTCTCAACAGCCTTAATATTTTTGGATGCTCGGCCCTC
AAAGTGCTAGAGAGCAAAGCTCCAAATCTCTCTAGTCTTTCTCTTTTACATTTTGGAGGC
AGGCTAGTCTTCTCACGTGTGAAAACATTGCAAATGAAGAAACTAATCACTGAAAGTACT
GTCTATGATGCTCGTACCAGGCTGCCATCCATTATGCCCAATCTTGAAACTCTTGTCATA
AACTCATTTGATTGGGTTGTTGATGCACCAATGCTGCCTACCAAATTCCTCTGTCTTAAG
CACCTGATCGTTCGCTTGTCATTAGGAACAACCATTACCCAGGCATTTGACTATTTCTCT
TTGGTTTCTTTCCTTGATGCGTCTCCTTCCTTGGAGACTTTTATATTAAATGTGAGTGAG
AAAGGCATGATCCATGAATCAATTTCTGCGCATCCACAATTGAGGCACACACCTGAGCAC
CACCATGGCCACCTCAGGAGTGTGAAGATATGTGGTTTCAGCTCTGAGAAAAGCTTATTT
GAACTAACACGTTATATTCTTGAGAATGCGGTGTCACTGAAATTTCTTACACTGGACACC
TTTTATGGGGATCGGTGTGGTCAGGGTAAGTGTACAAGTTGTTTACCCACGCCTGATGTT
TTTATGGATGTTTCCAAAGCGATCTCAGGTATCAAGACATACATCGAGAACAAAGTTCCA
TCCACAGTTAAACTAACTGTTCTGGAGCCTTGCAGCCGGTGCCATGTTAGAAGAGTAATT
TAGACACCATCCTAGTCATGCTACGTCACTTCCATTTAATTTAATTTAATTTGAGAAGAA
CCATGCTTGTTTCCTGGATTATTTATAGCTGTGTCCCGATGCACAGCAAATTTAATCTCT
GATGATGGACCGTGCTTGTGTTTCCTGAATTAATACATGCCAACTGTTTAGTTT