Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042396_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:3:164461293:164465986:1 gene:Zm00001d042396 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:viviparous1 description:Regulatory protein viviparous-1
Sequence	ATGGAAGCCTCCGCCGGCTCGTCGCCACCGCACTCCCAAGAGAACCCGCCGGAGCACGGT GGCGACATGGGAGGGGCCCCCGCGGAGGAGATCGGAGGGGAGGCGGCGGATGATTTCATG TTCGCTGAAGACACGTTCCCCTCCCTCCCGGACTTCCCTTGCCTTTCGTCGCCGTCCAGC TCCACCTTCTCGTCCAACTCCTCGTCAAACTCCTCCAGCGCCTACACCAACACGGCAGGA AGAGCCGGCGGCGAGCCCTCCGAGCCTGCTTCGGCCGGAGAAGGGTTTGATGCGCTCGAT GACATCGACCAGCTCCTCGACTTCGCGTCGCTTTCCATGCCGTGGGACTCCGAGCCGTTC CCGGGGGTTAGCATGATGCTAGAGAACGCCATGTCGGCGCCGCCGCAGCCGGTGGGCGAC GGCATGAGTGAAGAGAAAGCCGTGCCGGAAGGGACCACAGGGGGAGAGGAGGCCTGCATG GATGCGTCGGAGGGGGAGGAGCTGCCGCGGTTCTTCATGGAGTGGCTCACGAGCAACCGC GAAAACATCTCGGCCGAGGATCTCCGCGGGATCCGCCTCCGCCGCTCCACCATCGAGGCC GCCGCCGCCCGGCTCGGCGGCGGGCGCCAGGGCACCATGCAGCTGCTCAAGCTCATCCTC ACCTGGGTGCAGAACCACCACCTCCAGAGGAAGCGCCCGCGCGACGTGATGGAGGAGGAG GCGGGCCTGCACGTCCAGCTCCCCAGCCCGGTCGCCAACCCACCAGGATACGAGTTCCCC GCCGGCGGACAGGACATGGCCGCGGGCGGCGGCACATCTTGGATGCCCCACCAGCAGGCA TTCACGCCGCCTGCTGCGTACGGCGGCGACGCGGTGTACCCGAGCGCGGCAGGCCAACAG TACTCTTTCCACCAGGGCCCCAGCACGAGCAGCGTGGTCGTGAACAGCCAACCGTTCTCC CCGCCGCCTGTGGGCGACATGCACGGCGCGAACATGGCCTGGCCGCAGCAGTACGTGCCG TTCCCACCGCCTGGGGCTTCCACGGGCTCTTACCCTATGCCGCAGCCGTTCTCCCCCGGA TTCGGCGGGCAGTACGCCGGCGCCGGCGCTGGCCACCTCTCAGTGGCCCCCCAGCGCATG GCAGGCGTGGAGGCCTCGGCGACCAAGGAGGCCCGCAAGAAGCGCATGGCGAGACAGCGG CGCCTGTCCTGCCTGCAGCAGCAGCGCAGCCAGCAGCTGAGCCTGGGCCAGATCCAGGCC TCCGTCCACCTGCAGGAGCCGTCCCCTCGGTCCACGCACTCCGGCCCGGTCACGCCGTCA GCAGGCGGCTGGGGATTCTGGTCGCCGAGCAGCCAGCAGCAGGTCCAGAACCCGCTCTCC AAGTCCAATTCATCAAGGGCGCCGCCTCCCTCGCTGGAAGCGGCGGCGGTGGCGCCACAG ACAAAGCCCGCGCCTGCTGGTGCTCGGCAGGACGACATTCACCACCGCCTCGCAGCGGCT TCAGATAAGCGGCAGGGCGCCAAGGCGGACAAGAACCTGCGGTTCCTGCTGCAGAAGGTG CTGAAGCAGAGCGACGTCGGGAGCCTCGGCCGCATCGTGCTCCCCAAAGTGAGACAGACG CCGGCCGGCCCTTCATGA

Peptide Sequence

PEP ID	Zm00001d042396_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:3:164461293:164465986:1 gene:Zm00001d042396 transcript:Zm00001d042396_T006 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:viviparous1 description:Regulatory protein viviparous-1
Sequence	MEASAGSSPPHSQENPPEHGGDMGGAPAEEIGGEAADDFMFAEDTFPSLPDFPCLSSPSS STFSSNSSSNSSSAYTNTAGRAGGEPSEPASAGEGFDALDDIDQLLDFASLSMPWDSEPF PGVSMMLENAMSAPPQPVGDGMSEEKAVPEGTTGGEEACMDASEGEELPRFFMEWLTSNR ENISAEDLRGIRLRRSTIEAAAARLGGGRQGTMQLLKLILTWVQNHHLQRKRPRDVMEEE AGLHVQLPSPVANPPGYEFPAGGQDMAAGGGTSWMPHQQAFTPPAAYGGDAVYPSAAGQQ YSFHQGPSTSSVVVNSQPFSPPPVGDMHGANMAWPQQYVPFPPPGASTGSYPMPQPFSPG FGGQYAGAGAGHLSVAPQRMAGVEASATKEARKKRMARQRRLSCLQQQRSQQLSLGQIQA SVHLQEPSPRSTHSGPVTPSAGGWGFWSPSSQQQVQNPLSKSNSSRAPPPSLEAAAVAPQ TKPAPAGARQDDIHHRLAAASDKRQGAKADKNLRFLLQKVLKQSDVGSLGRIVLPKVRQT PAGPS

Transcript Sequence

Transcript ID	Zm00001d042396_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:164461293:164465986:1 gene:Zm00001d042396 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:viviparous1 description:Regulatory protein viviparous-1
Sequence	GTCTCTCTCCTCCCTTTGTCGTCGTGTCTCTCTGCATGGAAGCCTCCGCCGGCTCGTCGC CACCGCACTCCCAAGAGAACCCGCCGGAGCACGGTGGCGACATGGGAGGGGCCCCCGCGG AGGAGATCGGAGGGGAGGCGGCGGATGATTTCATGTTCGCTGAAGACACGTTCCCCTCCC TCCCGGACTTCCCTTGCCTTTCGTCGCCGTCCAGCTCCACCTTCTCGTCCAACTCCTCGT CAAACTCCTCCAGCGCCTACACCAACACGGCAGGAAGAGCCGGCGGCGAGCCCTCCGAGC CTGCTTCGGCCGGAGAAGGGTTTGATGCGCTCGATGACATCGACCAGCTCCTCGACTTCG CGTCGCTTTCCATGCCGTGGGACTCCGAGCCGTTCCCGGGGGTTAGCATGATGCTAGAGA ACGCCATGTCGGCGCCGCCGCAGCCGGTGGGCGACGGCATGAGTGAAGAGAAAGCCGTGC CGGAAGGGACCACAGGGGGAGAGGAGGCCTGCATGGATGCGTCGGAGGGGGAGGAGCTGC CGCGGTTCTTCATGGAGTGGCTCACGAGCAACCGCGAAAACATCTCGGCCGAGGATCTCC GCGGGATCCGCCTCCGCCGCTCCACCATCGAGGCCGCCGCCGCCCGGCTCGGCGGCGGGC GCCAGGGCACCATGCAGCTGCTCAAGCTCATCCTCACCTGGGTGCAGAACCACCACCTCC AGAGGAAGCGCCCGCGCGACGTGATGGAGGAGGAGGCGGGCCTGCACGTCCAGCTCCCCA GCCCGGTCGCCAACCCACCAGGATACGAGTTCCCCGCCGGCGGACAGGACATGGCCGCGG GCGGCGGCACATCTTGGATGCCCCACCAGCAGGCATTCACGCCGCCTGCTGCGTACGGCG GCGACGCGGTGTACCCGAGCGCGGCAGGCCAACAGTACTCTTTCCACCAGGGCCCCAGCA CGAGCAGCGTGGTCGTGAACAGCCAACCGTTCTCCCCGCCGCCTGTGGGCGACATGCACG GCGCGAACATGGCCTGGCCGCAGCAGTACGTGCCGTTCCCACCGCCTGGGGCTTCCACGG GCTCTTACCCTATGCCGCAGCCGTTCTCCCCCGGATTCGGCGGGCAGTACGCCGGCGCCG GCGCTGGCCACCTCTCAGTGGCCCCCCAGCGCATGGCAGGCGTGGAGGCCTCGGCGACCA AGGAGGCCCGCAAGAAGCGCATGGCGAGACAGCGGCGCCTGTCCTGCCTGCAGCAGCAGC GCAGCCAGCAGCTGAGCCTGGGCCAGATCCAGGCCTCCGTCCACCTGCAGGAGCCGTCCC CTCGGTCCACGCACTCCGGCCCGGTCACGCCGTCAGCAGGCGGCTGGGGATTCTGGTCGC CGAGCAGCCAGCAGCAGGTCCAGAACCCGCTCTCCAAGTCCAATTCATCAAGGGCGCCGC CTCCCTCGCTGGAAGCGGCGGCGGTGGCGCCACAGACAAAGCCCGCGCCTGCTGGTGCTC GGCAGGACGACATTCACCACCGCCTCGCAGCGGCTTCAGATAAGCGGCAGGGCGCCAAGG CGGACAAGAACCTGCGGTTCCTGCTGCAGAAGGTGCTGAAGCAGAGCGACGTCGGGAGCC TCGGCCGCATCGTGCTCCCCAAAGTGAGACAGACGCCGGCCGGCCCTTCATGATCTGCAT CATATCTATACCCCCCACTTGCGCATATAGATCTATCTACTTAGGGGGTGTTTGGTTAGA GGGACTAAAGATTAGTCTCTAGTTTTTAGTCCCTTTTAGTCCCTTTTTTGCCAAACACTA GGACTAAAATATGGACTAAAATGATTGCCAGTAGAATTAAAAGCTCATAATTATCATGTT GCCCTTACCTTTTTATAGATAACTAATATCATGAGTATATTCTAAGGGTATTTGAGTCTT TGGACAATGTATTTAATGACTTTAGAATCTATTTAGTCCCTAGAACCAAACATATAGGGA CTAAAGTTTAGTCCTAGGACTAAAGTTTAGTCCTAGAACTAATTGAAACCAAACATGCCC TTAGCTTGCATTGCGCGTGCATGCATGCCTGTTGCATCAGTTTGGTCACTTTCTGTTCTT GAACTAACTAAAATCGGCCATGGATAGGTCATATATATAGATCTACGCATATATACCAAA GCTCGCAAACTGCCCCTGAATCTGTTCTTCAAAACCGCCTTGCCTTTTTTAAACTGAACT GGGCCGTGGTTGGTTTGGCATCTCAACTAAAAATCGTCGCCTTGTCTTGTTTTTGGACGA TTCAGAAGGAAGCGGAGGTTCACCTGCCGGAGCTGAAGACGAGGGATGGCATCTCCATCC CCATGGAGGACATCGGAACGTCGCGCGTGTGGAACATGCGGTACAGGTGAGTGTGTGTGT CATCATTGGTCTAGGGACAGACGTCGAGCATCCATAAATTAAATCCAGTTGCTGGCTGCT GTTTTCCTCGAATCTGTTTCTTCTCCTTCTCCTTTTCCTTTGTTTGTTTGATTGATTGAT TGAGAGCTGCTGCCTGCAGTTCGTGCATGGTCGTCTACTGGGGGCAGGGAGAGATATATA GGTAGTATACCACTAACCACTGGGCCAGAGATAGTAAATGGCATGAGTACGACATCTGTG GCATGGTCCCTTTCTTTCCCAATTTGGCAAGTGGGTCATATGAATATAGTGTACGATGAG AATCCGAGGAGCAAATAGTGGCATGCACTCGTCTACACGGAATTCTGCACGCAATAAACA TGCATCTTCTCCAACTTGCTGATAAGCCTGATATATAACATACCACTACCACCAGGTCAG GTGATATTTGTTCTGAAAATGGCATCTTCTGTTCGGTCCAAAATATGATTGCCAGGACAC CACAGTAAACATGGTCTCTCAGTCCAGGACACCACAGTAAACATGGTCTCTCAGTCCTCC GGATCTCTCGTTAGTACAGCGAAGCTCTATAGTGATGTTCCTAGAGCTATTTTCACTGGC GTTTTTCAGTGACGCCAGTGCTAGGGGCCAGTAGAATTCGAATAAACAACTGACCCCTAG CACTGACGACACTAAAAAACGCCAGTGCAAATAGCTTTAAACCGCCACTATAGAGCTTCT TTGTACTAGTGTTTGGCAGCTAGGTGCACATCTTTGTGCAGCAGCCATAGTCGCGTTTTT TCTTCTTCGTCGTCGTCTTGTGGCTCTTTCTTCTGGTTTGGCTTTCTCATACTAATGAAG TTTATTAATCTTTAGTAATTCGAGTTGCGAAAATAATAATAACAACTTGTTCCAGTAGTG CAGGTTCTATGAAAATGAGGTAACTGTTTTTTTGGATTCTCATATGATCTGGTGATGTTT TTTTTCCAAAACTGGATTACCTTGCTGAAAACTAAAATTATTATTCATATATACGGTATA GTATCGACTGTTACCAGTGCAATGTCAGTGCTTTCATCAGCTGAGCTCCTTATTGCATGC ACGCAGGTTTTGGCCCAACAACAAGAGCAGAATGTATCTGCTGGAGAACACAGGGGAATT TGTTCGTTCCAACGAGCTTCAGGAGGGGGATTTCATAGTGATCTACTCCGATGTCAAGTC GGGCAAATATGTATGTTCTTCTATTGCCGACTATTTCCTTGCTACATAATGCTCGTTTTT CTGGTCCATATGCCTGCATCATTAGTCAACTCAAACGTGTTGTCGTCCTTGAAACTGCAA TCCAAATCTACGCAACCGTTTTGCATGCCACTGTTTGTATGTGGATGCCTGGATGGCAAT CAAGGACATAGTGGCATCTTTTGATCTCGCTGTTCATGGAATTGGTTTACTTCAGCAGCA ACTCATCAAGAACCCTGAAACCCCCCTTGTGTCCTATATATATCCACAGCTGATACGGGG CGTGAAGGTAAGGCCCCCGCCGGCGCAAGAGCAAGGCAGTGGTTCCAGCGGGGGAGGCAA GCACAGGCCCCTCTGTCCAGCAGGTCCAGGGAGAGCCGCAGCCGCCGGTGCTCCTGAAGA CGCCGTCGTCGACGGGGTCAGCGGCGCCTGCAAGGGGAGGTCTCCGGAAGGCGTGCGGCG GGTTCGGCAGCAGGGAGCCGGCGCCATGAGCCAGATGGCGGTGAGCATCTGAAAGAGCAG CAGACTCCGCCATATATTGATCGATCGACCAATCGATCGTTAGTTCTCCAAGTTACTATT AGCTAGCTATAGCTCGAAACAGCTGAACTGATGATGACGATGGTAACCTCCGTCGTGTGT GCTAAGCATGTAGCGTGCTAGGAGATGATATATTAAATATAATCGAGTAGTAGAGCCACC CGCTGTGTGACGCTAAATTTGTGTGCATGGTTTGGTTTG