Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042394_T013
CDS Infomation

cds chromosome:B73_RefGen_v4:3:164362545:164368754:-1 gene:Zm00001d042394 gene_biotype:protein_coding transcript_biotype:protein_coding description:BLISTER
Sequence

ATGCCAAGTTGGGGAAGAATTTCTTTATCAAGTCAAGTACATGATACCAAGCAATCTAGT
TCATATTCATCCAGCACCCTTTTTGGAAAGTCTGAAAATGCTTACTCTCAGGACTACTCC
ACAAAGAGTGATACCTCTAGTCAGTTGAGAGATACCTCCAAAGACTCTTCCCAAGTGGAG
CAATCTCTGTATGCCAGCACTCGGGATTATGGCAATGCCTTCAATAGTTCAAGGACTATT
GTTACTGTAGAGCATGATACAAATGTTGGAATAACTCGGACATCTGCAGATTCCGCACCT
GGTGTTAATTTTGAAAGACAGGATCCTTTTCTGTCATCTGGTTATCCAACTACATACACT
CGTTCAAGGCCATCGTTTCTTGATTCAATTGGAGTACAAAGAGTCCCTCCAACAACTCAA
GCCTCATATAGGGAGCCTGCAAAGGCTAATCAACTATCCCACAATTCGAATTATCAGAGT
TCATTTGTGAAGCAATCAAATCAACAACCCACTTCAAGTAATGCTGCAGATATTTCTTTT
GCATCAGAAAGTCAGGAATATAGTCATGAAAAGGGGTCATATGGCAGCTCCAACCATCCT
GATTTCTCACTTCCTAAAGAAGAAAGAAGTATACAACATGGTAAACAAACATTCCAAAAT
TTTGCAACTCATGGGAAAGATGACGATTTTGCAACATTAGAGCAGCTCATTGAAGATTTA
ACAAAAGAGAAGTTTTCCTTACAACGATCTCTTCAGAAATCTCAAGAGCTAGCAGAAACT
TTGGCCACAGATAACTCTGCACTAACTGACAAGTTCAACCAACAGGCACATGTAATCAGC
CAGTTGACATCTGACATGGAGAGATTGCAGGAAGAAATTCAAGCTCAATTGCTGGCTCTG
GAGTCTGTCAGGACCGAGTATGCTAATGCACAACTAGAATGCAGTGCTGCAGATGAGAGG
GCAAAAGTACTTGCAGCTGAAGTCATTCTACTAGAAGATAAGGCTTTGAGACTGAGATCA
AGTGAGCTAAAACTTGAAAAGGAAGTTGAAGGTTTGCATTCTGAGATTTCTGCTTACAGG
CGCAAAGTTTCTAGTCTAGAAAAGGAGCGCCAGCATCTTCAATCCACTGTTGAAGCTCTT
CAAGAAGAAAAGAAGCTCCTATATTCTAAATTGAGGAACATTCCTGTGAATGAGAGGGCA
ACTACTGTAGAGAAACCTTCAGTTGATAAAAAAGATGCATCAACCGTGACAGAAGATTTA
GATACTGGGGAAATCAGCTCTTCAGAGACACTGACCAGCACTGTTGACATATTGGAAGAC
GCTGGAACATCTGTTTTGCGTTCCAACATTGTGTCTGATTTTCCTTCCTCGGAACAGGTC
TCATCTAGCATTCCAGATGATCAGCTTAGAATGATTGACAACATCAATTCTTTGATGTCA
GAGTTAGCAGTGGAGAGAGAAGAACTGCTGCGAGCACTGAGAATTGAGTCATCCAACTGC
TCCAAGCTGAAGGAATTGAACAAGGACCTAACACAAAAGCTGGAGGTTCAGACACAGAGG
CTTGAACTATTGACTTCTCAAAGGATGGCTAACGAGAATGCCCTGGCGAAACCAATTGAC
ACACGCCCCATCAACGAGGCAACAATGTATGCGGATGAAGGAGACGAGGTTGTTGAACGG
GTGCTTGGCTGGATAATGAAGCTCTTCCCAGGTGGGCCAAAGCGGCGAACCAGCAAGCTT
CTGTAA

Peptide Sequence

PEP ID

Zm00001d042394_P013
PEP Infomation

pep chromosome:B73_RefGen_v4:3:164362545:164368754:-1 gene:Zm00001d042394 transcript:Zm00001d042394_T013 gene_biotype:protein_coding transcript_biotype:protein_coding description:BLISTER
Sequence

MPSWGRISLSSQVHDTKQSSSYSSSTLFGKSENAYSQDYSTKSDTSSQLRDTSKDSSQVE
QSLYASTRDYGNAFNSSRTIVTVEHDTNVGITRTSADSAPGVNFERQDPFLSSGYPTTYT
RSRPSFLDSIGVQRVPPTTQASYREPAKANQLSHNSNYQSSFVKQSNQQPTSSNAADISF
ASESQEYSHEKGSYGSSNHPDFSLPKEERSIQHGKQTFQNFATHGKDDDFATLEQLIEDL
TKEKFSLQRSLQKSQELAETLATDNSALTDKFNQQAHVISQLTSDMERLQEEIQAQLLAL
ESVRTEYANAQLECSAADERAKVLAAEVILLEDKALRLRSSELKLEKEVEGLHSEISAYR
RKVSSLEKERQHLQSTVEALQEEKKLLYSKLRNIPVNERATTVEKPSVDKKDASTVTEDL
DTGEISSSETLTSTVDILEDAGTSVLRSNIVSDFPSSEQVSSSIPDDQLRMIDNINSLMS
ELAVEREELLRALRIESSNCSKLKELNKDLTQKLEVQTQRLELLTSQRMANENALAKPID
TRPINEATMYADEGDEVVERVLGWIMKLFPGGPKRRTSKLL

Transcript Sequence

Transcript ID

Zm00001d042394_T013
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:164362545:164368754:-1 gene:Zm00001d042394 gene_biotype:protein_coding transcript_biotype:protein_coding description:BLISTER
Sequence

GGTGCCATGGGCTGTATATGAGAATGGCCCAGAGAGTGCTTCCAGCGGTGCAGAATTCCT
GTCAAATGCTCCGCAAGATGCTGTTACTGATGGAGGAAGTAAGTTCTATGGGAACTTAAG
CTTCTCTGATCTTGTTAATGGTCATCATGAGAACTGGAGAGGCGATGAAGCCCGTAAAAG
GGATGAGCACAGCCCTGACAAGGATGTGCAATCAACATCTAAATTAAGTGCCTTTGGGAA
CAGCAGTTTAACTTTACCTTCTACTGACAACATGCCAAGTTGGGGAAGAATTTCTTTATC
AAGTCAAGTACATGATACCAAGCAATCTAGTTCATATTCATCCAGCACCCTTTTTGGAAA
GTCTGAAAATGCTTACTCTCAGGACTACTCCACAAAGAGTGATACCTCTAGTCAGTTGAG
AGATACCTCCAAAGACTCTTCCCAAGTGGAGCAATCTCTGTATGCCAGCACTCGGGATTA
TGGCAATGCCTTCAATAGTTCAAGGACTATTGTTACTGTAGAGCATGATACAAATGTTGG
AATAACTCGGACATCTGCAGATTCCGCACCTGGTGTTAATTTTGAAAGACAGGATCCTTT
TCTGTCATCTGGTTATCCAACTACATACACTCGTTCAAGGCCATCGTTTCTTGATTCAAT
TGGAGTACAAAGAGTCCCTCCAACAACTCAAGCCTCATATAGGGAGCCTGCAAAGGCTAA
TCAACTATCCCACAATTCGAATTATCAGAGTTCATTTGTGAAGCAATCAAATCAACAACC
CACTTCAAGTAATGCTGCAGATATTTCTTTTGCATCAGAAAGTCAGGAATATAGTCATGA
AAAGGGGTCATATGGCAGCTCCAACCATCCTGATTTCTCACTTCCTAAAGAAGAAAGAAG
TATACAACATGGTAAACAAACATTCCAAAATTTTGCAACTCATGGGAAAGATGACGATTT
TGCAACATTAGAGCAGCTCATTGAAGATTTAACAAAAGAGAAGTTTTCCTTACAACGATC
TCTTCAGAAATCTCAAGAGCTAGCAGAAACTTTGGCCACAGATAACTCTGCACTAACTGA
CAAGTTCAACCAACAGGCACATGTAATCAGCCAGTTGACATCTGACATGGAGAGATTGCA
GGAAGAAATTCAAGCTCAATTGCTGGCTCTGGAGTCTGTCAGGACCGAGTATGCTAATGC
ACAACTAGAATGCAGTGCTGCAGATGAGAGGGCAAAAGTACTTGCAGCTGAAGTCATTCT
ACTAGAAGATAAGGCTTTGAGACTGAGATCAAGTGAGCTAAAACTTGAAAAGGAAGTTGA
AGGTTTGCATTCTGAGATTTCTGCTTACAGGCGCAAAGTTTCTAGTCTAGAAAAGGAGCG
CCAGCATCTTCAATCCACTGTTGAAGCTCTTCAAGAAGAAAAGAAGCTCCTATATTCTAA
ATTGAGGAACATTCCTGTGAATGAGAGGGCAACTACTGTAGAGAAACCTTCAGTTGATAA
AAAAGATGCATCAACCGTGACAGAAGATTTAGATACTGGGGAAATCAGCTCTTCAGAGAC
ACTGACCAGCACTGTTGACATATTGGAAGACGCTGGAACATCTGTTTTGCGTTCCAACAT
TGTGTCTGATTTTCCTTCCTCGGAACAGGTCTCATCTAGCATTCCAGATGATCAGCTTAG
AATGATTGACAACATCAATTCTTTGATGTCAGAGTTAGCAGTGGAGAGAGAAGAACTGCT
GCGAGCACTGAGAATTGAGTCATCCAACTGCTCCAAGCTGAAGGAATTGAACAAGGACCT
AACACAAAAGCTGGAGGTTCAGACACAGAGGCTTGAACTATTGACTTCTCAAAGGATGGC
TAACGAGAATGCCCTGGCGAAACCAATTGACACACGCCCCATCAACGAGGCAACAATGTA
TGCGGATGAAGGAGACGAGGTTGTTGAACGGGTGCTTGGCTGGATAATGAAGCTCTTCCC
AGGTGGGCCAAAGCGGCGAACCAGCAAGCTTCTGTAATGAAAAT