Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042389_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:164252515:164254119:1 gene:Zm00001d042389 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGGCGGCCCAGCCCATCCGCAAACCGCACTTCGACCGCATCGTCCGCGCGCTCGCCTCC GACCACCCGCCACCGCCCCGCGCCGAGCTGCACGCGTTTCTCGTCCGCTCGCACGCCGCG GCCACCGCGCCCGCCCTCGTCCGCTCGCTCCTCAACGGCGCCATCAGCCGCCTCTCCAAG CGGCGCCCGCGCGCCGCGCTCGCCTTGCTCCTCATCATGCCGCGCCTGCCCGTGCGCCCC GACCACTTCACGCTCCCCTTCGCGCTCAACGCCGCCGCGTCGCTCCGCCTCCTCCCGCTC GGCGCCTCCCTGCACGCCGTCGCGCTCCGCCTCGCGCTCCTCCCGCTCCGCCTCCCCGTC GCCAACGCGCTCGTCGACCTGTACGCCAAGTGCGAGGAGTTCCCCGCCGCGCACGCCGCG CTGGCGGACATCCCCGCCCCCGACGCGGTCTCCTTCAACTCCCTCCTCTGCGCGCACGCC CGCAACGCCTCCGTGCGTCCCGCCGAGTCCCTCTTCGCTGCCATGCCCACCAGGACCCAG GTCTCCTGGAACGCCATGGTGGTCCTCTACGTCAGCGCTGGTGACCTCGCGGCCGCTTGC CGTGTGTTTGACGAAATGCCGACGAGGGACACGGCCTCGTCGATGGTGCTCATTGTCGGG TATTGTAAGTGCGGGCTGGTGCAGAATGCGCGTGAGCTGTTTGACAAAATGCCTACAAAG GATCTCGTGGCCCGGACGGCCATGATTAATGGTTATGCACAGACTGGGCGGCCAAAGGTG GCACTCGCTTTATTTAGGGATCTGGAGGCTGCTGGGATTGAGCCTGATGGAGCCACAATG GTTGGGGTTATCTCTGCAGTTTCACAGATAGGCAGCACGGAGTTGGCTGGGTGGGTTGGA GCTTACGTCGACAGGAAGAAGATCGAAAGGAATGAGAAGGTTCTTACAGCACTAGTAGAT ATGCACGCAAAGTGTGGCAACATTGAGCAGGCACTGAGTGCTTTCAGGGAGATCCCACGA CCTGATGCCTATCCATACACAGCACTGATTAGCGGCCTGGCAACACATGGACACGAAAAT CTGGCACTTTCAGTGTTCGAAAGGATGCGGGCTGAAGACATCAAGCCTCACCCTATCACT TTCGTTGGTGTGCTTACAGCATGCAGCCACGCAGGGAATGTTGAAAAGGGACTGGAGTAT TGGGAGGCAATGGTGCAGGATTATGGTATTGAGCGCCATGCGGACCACTATGCCTGTGTC ATTGACATGCTCGGGCGTGCAGGGAGGATTGAGGAGGCTTTCGAGATGGTTCAAACGATG CCGATGGGGCCACATCCGGGGGCTCTTGGTGCACTCCTGAGTGCCTGCAAGACATATGAT AACGTTGAGATTGCAGAAGTTGTCGCAAACAAGCTATTTGAGTTGGAACCTTGGAACACT GGGAACTATATACTCTTGTCAAACATATATGCTGGGAAAGAACTCTGGGAGGAGGCAGAA AGGGTCAGATCACTGATGAGAACAAAACTGCCATTTAAAAGTCCTGGATCCACTTGGTTT GAGGATCGACAGAGAGAGCATGCTAAGATGTCTATCATGGACTGA

Peptide Sequence

PEP ID	Zm00001d042389_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:164252515:164254119:1 gene:Zm00001d042389 transcript:Zm00001d042389_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	MAAQPIRKPHFDRIVRALASDHPPPPRAELHAFLVRSHAAATAPALVRSLLNGAISRLSK RRPRAALALLLIMPRLPVRPDHFTLPFALNAAASLRLLPLGASLHAVALRLALLPLRLPV ANALVDLYAKCEEFPAAHAALADIPAPDAVSFNSLLCAHARNASVRPAESLFAAMPTRTQ VSWNAMVVLYVSAGDLAAACRVFDEMPTRDTASSMVLIVGYCKCGLVQNARELFDKMPTK DLVARTAMINGYAQTGRPKVALALFRDLEAAGIEPDGATMVGVISAVSQIGSTELAGWVG AYVDRKKIERNEKVLTALVDMHAKCGNIEQALSAFREIPRPDAYPYTALISGLATHGHEN LALSVFERMRAEDIKPHPITFVGVLTACSHAGNVEKGLEYWEAMVQDYGIERHADHYACV IDMLGRAGRIEEAFEMVQTMPMGPHPGALGALLSACKTYDNVEIAEVVANKLFELEPWNT GNYILLSNIYAGKELWEEAERVRSLMRTKLPFKSPGSTWFEDRQREHAKMSIMD

Transcript Sequence

Transcript ID	Zm00001d042389_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:164252515:164254119:1 gene:Zm00001d042389 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGGCGGCCCAGCCCATCCGCAAACCGCACTTCGACCGCATCGTCCGCGCGCTCGCCTCC GACCACCCGCCACCGCCCCGCGCCGAGCTGCACGCGTTTCTCGTCCGCTCGCACGCCGCG GCCACCGCGCCCGCCCTCGTCCGCTCGCTCCTCAACGGCGCCATCAGCCGCCTCTCCAAG CGGCGCCCGCGCGCCGCGCTCGCCTTGCTCCTCATCATGCCGCGCCTGCCCGTGCGCCCC GACCACTTCACGCTCCCCTTCGCGCTCAACGCCGCCGCGTCGCTCCGCCTCCTCCCGCTC GGCGCCTCCCTGCACGCCGTCGCGCTCCGCCTCGCGCTCCTCCCGCTCCGCCTCCCCGTC GCCAACGCGCTCGTCGACCTGTACGCCAAGTGCGAGGAGTTCCCCGCCGCGCACGCCGCG CTGGCGGACATCCCCGCCCCCGACGCGGTCTCCTTCAACTCCCTCCTCTGCGCGCACGCC CGCAACGCCTCCGTGCGTCCCGCCGAGTCCCTCTTCGCTGCCATGCCCACCAGGACCCAG GTCTCCTGGAACGCCATGGTGGTCCTCTACGTCAGCGCTGGTGACCTCGCGGCCGCTTGC CGTGTGTTTGACGAAATGCCGACGAGGGACACGGCCTCGTCGATGGTGCTCATTGTCGGG TATTGTAAGTGCGGGCTGGTGCAGAATGCGCGTGAGCTGTTTGACAAAATGCCTACAAAG GATCTCGTGGCCCGGACGGCCATGATTAATGGTTATGCACAGACTGGGCGGCCAAAGGTG GCACTCGCTTTATTTAGGGATCTGGAGGCTGCTGGGATTGAGCCTGATGGAGCCACAATG GTTGGGGTTATCTCTGCAGTTTCACAGATAGGCAGCACGGAGTTGGCTGGGTGGGTTGGA GCTTACGTCGACAGGAAGAAGATCGAAAGGAATGAGAAGGTTCTTACAGCACTAGTAGAT ATGCACGCAAAGTGTGGCAACATTGAGCAGGCACTGAGTGCTTTCAGGGAGATCCCACGA CCTGATGCCTATCCATACACAGCACTGATTAGCGGCCTGGCAACACATGGACACGAAAAT CTGGCACTTTCAGTGTTCGAAAGGATGCGGGCTGAAGACATCAAGCCTCACCCTATCACT TTCGTTGGTGTGCTTACAGCATGCAGCCACGCAGGGAATGTTGAAAAGGGACTGGAGTAT TGGGAGGCAATGGTGCAGGATTATGGTATTGAGCGCCATGCGGACCACTATGCCTGTGTC ATTGACATGCTCGGGCGTGCAGGGAGGATTGAGGAGGCTTTCGAGATGGTTCAAACGATG CCGATGGGGCCACATCCGGGGGCTCTTGGTGCACTCCTGAGTGCCTGCAAGACATATGAT AACGTTGAGATTGCAGAAGTTGTCGCAAACAAGCTATTTGAGTTGGAACCTTGGAACACT GGGAACTATATACTCTTGTCAAACATATATGCTGGGAAAGAACTCTGGGAGGAGGCAGAA AGGGTCAGATCACTGATGAGAACAAAACTGCCATTTAAAAGTCCTGGATCCACTTGGTTT GAGGATCGACAGAGAGAGCATGCTAAGATGTCTATCATGGACTGA