Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042380_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:163963065:163964837:1 gene:Zm00001d042380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	ATGCGGCCTCCCTGTCCCGCCGTTGCACTGCCAACGCTCCTCTCCCGCCTCCGTGCGTGC AGGTCCGCCTCCCACGCGCTCCAGTGCCACGCCCTCCTCCTCACCTCGGGCCACCTCGCC GCGTCCCCGCTGCGCCTCTCCAACCACCTCCTCCTCGCCCTCGCGTCCGTCCCCAGCGCC GCCGCGCTCGCGGACGTCGTCTTCGCGCGACTCCCGCTGCCCGCCGCCCGCGACCCATTC GCCTGGAACACAGCCATCCGCCTCCATGCCCCGGCGCGCCCCCGCGCCGCGCTGCTCTAC TTCGCGCGGATGCGCCGTTGCGGCGTGCGGCCCGACGCCTACACGTTCCCCGCGGTCCTC AAGGCCTGCGGCTGCGCGCCTGGCTGCAGGGCCGGACTCCTAGTTCACGCCGAGGCCGTG AGGAGGGGGCTGGCCGCGGACCTCTTCACGGTGAACGCGCTCATCAGCTTCTACTGTAGG ATCCTGGACATCCGCTCGGGCAGGAAGGTGTTCGACGAGGCAGGCGGCGTTTCGCGGGAT CTCGTCTCGTGGAACTCCATGGTCGCTGGTTGTGGAGAGGCAAAGGAGGCTTTGGAGTAT TTTCAGAGTATGCTACGGTGTGGCTTAAGGCCTGATAGGATCGCTGCCGTGGGAGCTGTC AGTGCTTGTGCTCAGCTGGGCGCTTTGGAGCAAGGAAGATGGCTTCACTCTTACTTGGAA AAGAAGAAGCTGCTGTCTGATGTTGTGGTGCAAACAGCTTTGATAGATATGTACGTGAAA TGTGGGTGCTTGGATCTTGCCATGTTGATCTTTGAAAGCATGGCCGAGCGGAGTGTAGTC ACTTGGAATGTGATGATTGTTGGACTTGGAACTCATGGTTTTGGTCTGGATGCTGTCACG CTGTTCCATCGAATGGAGGCTGAAAGTGTTGCAGTGGATGATCTTAGTGTACTTGGCATG CTGACTGCTTGCACACATGCTGGGTTGGTCTCAGAGGGTTTAGAGATATTTCACAGAATG AAAAAGGATTTTGGGATAGATCCCAAGGTAGAACATTATGGTGCATTGGTTGATCTACTT GGTCGTGCTGGCCGTTTGGATCAGGCCAGGCATGCTATAGAGACAATGCCCATGGAACCA ACTCCAGAATTGTGGGGATCTCTTCTTGCTGCCTGTCGAAGCCACAGTTGTGTTGAGCTG GCTGAGTTATCAGTGGAACGTCTTGCAGATCTTGGAGCTGATGATTCTGGAGTCTATGTC CTTCTGTCAAATATCTATGCTGATGAAGGAATGTGGGGTGATGTTTTGAGGATTAGGAAA TTGATGAGTGATGAGGGAATGAGAAAGGATATTGGACGGAGTGTGATTGAAGTGGATGGT GAAATACATGAGTTTGTGAATGGAGTTGGCTCATATATTTGTAAGGATGAAATGTACTTG ATGCTGTGGAATTTGTCTAACATGGTGGCATCTATTTGA

Peptide Sequence

PEP ID	Zm00001d042380_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:163963065:163964837:1 gene:Zm00001d042380 transcript:Zm00001d042380_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	MRPPCPAVALPTLLSRLRACRSASHALQCHALLLTSGHLAASPLRLSNHLLLALASVPSA AALADVVFARLPLPAARDPFAWNTAIRLHAPARPRAALLYFARMRRCGVRPDAYTFPAVL KACGCAPGCRAGLLVHAEAVRRGLAADLFTVNALISFYCRILDIRSGRKVFDEAGGVSRD LVSWNSMVAGCGEAKEALEYFQSMLRCGLRPDRIAAVGAVSACAQLGALEQGRWLHSYLE KKKLLSDVVVQTALIDMYVKCGCLDLAMLIFESMAERSVVTWNVMIVGLGTHGFGLDAVT LFHRMEAESVAVDDLSVLGMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLL GRAGRLDQARHAIETMPMEPTPELWGSLLAACRSHSCVELAELSVERLADLGADDSGVYV LLSNIYADEGMWGDVLRIRKLMSDEGMRKDIGRSVIEVDGEIHEFVNGVGSYICKDEMYL MLWNLSNMVASI

Transcript Sequence

Transcript ID	Zm00001d042380_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:163963065:163964837:1 gene:Zm00001d042380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	ATGCGGCCTCCCTGTCCCGCCGTTGCACTGCCAACGCTCCTCTCCCGCCTCCGTGCGTGC AGGTCCGCCTCCCACGCGCTCCAGTGCCACGCCCTCCTCCTCACCTCGGGCCACCTCGCC GCGTCCCCGCTGCGCCTCTCCAACCACCTCCTCCTCGCCCTCGCGTCCGTCCCCAGCGCC GCCGCGCTCGCGGACGTCGTCTTCGCGCGACTCCCGCTGCCCGCCGCCCGCGACCCATTC GCCTGGAACACAGCCATCCGCCTCCATGCCCCGGCGCGCCCCCGCGCCGCGCTGCTCTAC TTCGCGCGGATGCGCCGTTGCGGCGTGCGGCCCGACGCCTACACGTTCCCCGCGGTCCTC AAGGCCTGCGGCTGCGCGCCTGGCTGCAGGGCCGGACTCCTAGTTCACGCCGAGGCCGTG AGGAGGGGGCTGGCCGCGGACCTCTTCACGGTGAACGCGCTCATCAGCTTCTACTGTAGG ATCCTGGACATCCGCTCGGGCAGGAAGGTGTTCGACGAGGCAGGCGGCGTTTCGCGGGAT CTCGTCTCGTGGAACTCCATGGTCGCTGGTTGTGGAGAGGCAAAGGAGGCTTTGGAGTAT TTTCAGAGTATGCTACGGTGTGGCTTAAGGCCTGATAGGATCGCTGCCGTGGGAGCTGTC AGTGCTTGTGCTCAGCTGGGCGCTTTGGAGCAAGGAAGATGGCTTCACTCTTACTTGGAA AAGAAGAAGCTGCTGTCTGATGTTGTGGTGCAAACAGCTTTGATAGATATGTACGTGAAA TGTGGGTGCTTGGATCTTGCCATGTTGATCTTTGAAAGCATGGCCGAGCGGAGTGTAGTC ACTTGGAATGTGATGATTGTTGGACTTGGAACTCATGGTTTTGGTCTGGATGCTGTCACG CTGTTCCATCGAATGGAGGCTGAAAGTGTTGCAGTGGATGATCTTAGTGTACTTGGCATG CTGACTGCTTGCACACATGCTGGGTTGGTCTCAGAGGGTTTAGAGATATTTCACAGAATG AAAAAGGATTTTGGGATAGATCCCAAGGTAGAACATTATGGTGCATTGGTTGATCTACTT GGTCGTGCTGGCCGTTTGGATCAGGCCAGGCATGCTATAGAGACAATGCCCATGGAACCA ACTCCAGAATTGTGGGGATCTCTTCTTGCTGCCTGTCGAAGCCACAGTTGTGTTGAGCTG GCTGAGTTATCAGTGGAACGTCTTGCAGATCTTGGAGCTGATGATTCTGGAGTCTATGTC CTTCTGTCAAATATCTATGCTGATGAAGGAATGTGGGGTGATGTTTTGAGGATTAGGAAA TTGATGAGTGATGAGGGAATGAGAAAGGATATTGGACGGAGTGTGATTGAAGTGGATGGT GAAATACATGAGTTTGTGAATGGAGTTGGCTCATATATTTGTAAGGATGAAATGTACTTG ATGCTGTGGAATTTGTCTAACATGGTGGCATCTATTTGA