Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042370_T019
CDS Infomation	cds chromosome:B73_RefGen_v4:3:163508799:163516169:1 gene:Zm00001d042370 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-4 complex subunit epsilon
Sequence	ATGTACACTGTATTGGGTGACATATTCAGGAAAGGTGACACTGCAAGCAACATTGGCAAT GCTATACTGTATGAATGCATATGCTGTATTTCATTCATTTTCCCAAACCCTAAGATGCTA GAGGCTGCAGCTGAAACAACATCAAAGTTTCTGAAGAGTGATAGTCATAATCTTAAGTAC ATGGGTATTGATGCTCTTGGCCGGCTAATAAAAATAAACCCAGATATTGCAGAAGAGCAC CAGCTAGCTGTCATTGATTGCCTAGAGGATCCAGATGACACTTTGAAGCGCAAGACCTTT GAGCTTCTTTATAAGATGACAAAATCAACAAATGTTGAAGTGATTGTTGATAGGATGATT GAATACATGATCAACATAACTGATCATCATTATAAGACAGAAATTGCATCACGTTGTGTT GAACTTGCAGAGCAATTTGCGCCTAGCAATCAGTGGTTCATCCAGACCATGAACAAAGTC TTTGAGCATGCCGGAGATCTTGTCAACATCAGAGTGGCGCACAATCTGATGCGGCTAATT GCTGAAGGCTTTGGAGAGGAGGATGAAGGTGCTGACAGTCAGCTAAGATCATCGGCTGTG GATTCATATCTCCGCATTGTCGGAGAGCCAAAGCTTCCTTCTTCGTTTCTGCAGATAATA TGCTGGGTTTTGGGGGAATATGGAACAGCAGATGGAAAATATTCAGCTTCTTATATTATT GGGAAGTTGTGTGATGTGGCAGAGGCCCACCTCACTGATGACACTGTCAAGGCATATGCG ATCTCAGCAATTCTGAAGACATTTGCGTTTGAAATCACTCTTGGAAGAAAGATCGATTTG CTGCCTGAGTGTCAAACATTGGTAGATGAATTGTCAGCTTCACATTCGACGGACTTGCAG CAACGGGCATACGAGCTACAGGCTTTACTAGGCTTGGACAAAACTGCTGTTGAAAGTGTT ATGCCCGCAGATGCAAGCTGTGAAGACATTGAGGTCGACAGAAGCCTCTCATTTCTAAAC AGTTATGTGCAGCAAGCCTTGGAAAATGGTGCGTCCCCTTACATTCCAGAGAGTGAACGC TCTGGTGTTATAAGTGTCGGCAGCTACAGAAGCCAAGAACAACAGGAAACATCTGCCCAT ACTCTTAGATTTGAGGCCTATGAGATGCCTAAACCTTCGTTGCCACTAGCAACTTCACAA ACCAGCATGTCCACACCACCTACTGATCTGGTTCCAGTTCCAGAGGCAGGCTACTACAAG GAAGACAATCAAACATCAATGTCTCAACCACCAAGTGATGCAATTTCTGGTGAGTTTGGT GTCAAACTTCGCCTTGATGGTGTTCAAAAGAAATGGGGAAGGCCAACATATTCTTCTTCT ACACCCTCAAGCTCGATCTCTAGTCAACCAACACCCAATGGGGCCTCTCATTCTGATGGG GGAGGGTCAAGTTCGCAACCACGGGAGTCATCATACGGTTCTAAGAGACAGCAGGGCACG GAAGTTTCAGCAGAAAAGCAACGGCTGGCTGCTTCACTTTTTGGTTCAGCAGCAGCTAAA GCTGATAGGAAAGCACAAGCTTCTCGAAAGACAGCAAAGGACAGTCCCTCAACTGAGAAA GTGGCTACCACTAATGTGACTGCCCAGCCTGTTAAGGAGCAAGTAATCCCTGCTGCACCA CCGCCTGATCTGCTGGATCTGGGTGATGAGCCTGTTTCATCGAGTCCACCGTCGGCTGAC CCTTTCTCACAGCTAGAGGGGCTCCTTGGACCAGCATCGGCTGCCCCGGTGCTTTCTGGA ACTCCGGCTACCAGCACTTCCAAAGCACCAGGCCTTCTGTCAATCTTCTCAGATGATGTA CCAACCGGAGTGACTAGTGTGTCCACCGATCCCACTCTAGGTGATGTTAATTCGATGGGC TCCCGCAAAGGAGCAGCTGCAGTGGCTTCAATGAAGGGCCCGAGCCTCCAAGATGCCTTG CAAAAGGATGCGGCTGCACGACAAGTAGGAGTGACACCAACAGTGAACAACCCCAATCTT TTCAAGGACTTGCTAGGCTGA

Peptide Sequence

PEP ID	Zm00001d042370_P019
PEP Infomation	pep chromosome:B73_RefGen_v4:3:163508799:163516169:1 gene:Zm00001d042370 transcript:Zm00001d042370_T019 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-4 complex subunit epsilon
Sequence	MYTVLGDIFRKGDTASNIGNAILYECICCISFIFPNPKMLEAAAETTSKFLKSDSHNLKY MGIDALGRLIKINPDIAEEHQLAVIDCLEDPDDTLKRKTFELLYKMTKSTNVEVIVDRMI EYMINITDHHYKTEIASRCVELAEQFAPSNQWFIQTMNKVFEHAGDLVNIRVAHNLMRLI AEGFGEEDEGADSQLRSSAVDSYLRIVGEPKLPSSFLQIICWVLGEYGTADGKYSASYII GKLCDVAEAHLTDDTVKAYAISAILKTFAFEITLGRKIDLLPECQTLVDELSASHSTDLQ QRAYELQALLGLDKTAVESVMPADASCEDIEVDRSLSFLNSYVQQALENGASPYIPESER SGVISVGSYRSQEQQETSAHTLRFEAYEMPKPSLPLATSQTSMSTPPTDLVPVPEAGYYK EDNQTSMSQPPSDAISGEFGVKLRLDGVQKKWGRPTYSSSTPSSSISSQPTPNGASHSDG GGSSSQPRESSYGSKRQQGTEVSAEKQRLAASLFGSAAAKADRKAQASRKTAKDSPSTEK VATTNVTAQPVKEQVIPAAPPPDLLDLGDEPVSSSPPSADPFSQLEGLLGPASAAPVLSG TPATSTSKAPGLLSIFSDDVPTGVTSVSTDPTLGDVNSMGSRKGAAAVASMKGPSLQDAL QKDAAARQVGVTPTVNNPNLFKDLLG

Transcript Sequence

Transcript ID	Zm00001d042370_T019
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:163508799:163516169:1 gene:Zm00001d042370 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-4 complex subunit epsilon
Sequence	TGAGTTAAACTAGACATTATTTATTTGTTAGGTTGCCAAGCTGCCAGTGCAAATTATGCT TCTAATGGGTTTAAGTCTTCGGTTGTCGCCATGCTATCTGCCTTAGATTTTGTGTCTGTC ATCTGCAGATAAAACTATTGAAGATACTTGCTGTACTTGGTAGTGGCGATAAACAAGCAA GTGGGCATATGTACACTGTATTGGGTGACATATTCAGGAAAGGTGACACTGCAAGCAACA TTGGCAATGCTATACTGTATGAATGCATATGCTGTATTTCATTCATTTTCCCAAACCCTA AGATGCTAGAGGCTGCAGCTGAAACAACATCAAAGTTTCTGAAGAGTGATAGTCATAATC TTAAGTACATGGGTATTGATGCTCTTGGCCGGCTAATAAAAATAAACCCAGATATTGCAG AAGAGCACCAGCTAGCTGTCATTGATTGCCTAGAGGATCCAGATGACACTTTGAAGCGCA AGACCTTTGAGCTTCTTTATAAGATGACAAAATCAACAAATGTTGAAGTGATTGTTGATA GGATGATTGAATACATGATCAACATAACTGATCATCATTATAAGACAGAAATTGCATCAC GTTGTGTTGAACTTGCAGAGCAATTTGCGCCTAGCAATCAGTGGTTCATCCAGACCATGA ACAAAGTCTTTGAGCATGCCGGAGATCTTGTCAACATCAGAGTGGCGCACAATCTGATGC GGCTAATTGCTGAAGGCTTTGGAGAGGAGGATGAAGGTGCTGACAGTCAGCTAAGATCAT CGGCTGTGGATTCATATCTCCGCATTGTCGGAGAGCCAAAGCTTCCTTCTTCGTTTCTGC AGATAATATGCTGGGTTTTGGGGGAATATGGAACAGCAGATGGAAAATATTCAGCTTCTT ATATTATTGGGAAGTTGTGTGATGTGGCAGAGGCCCACCTCACTGATGACACTGTCAAGG CATATGCGATCTCAGCAATTCTGAAGACATTTGCGTTTGAAATCACTCTTGGAAGAAAGA TCGATTTGCTGCCTGAGTGTCAAACATTGGTAGATGAATTGTCAGCTTCACATTCGACGG ACTTGCAGCAACGGGCATACGAGCTACAGGCTTTACTAGGCTTGGACAAAACTGCTGTTG AAAGTGTTATGCCCGCAGATGCAAGCTGTGAAGACATTGAGGTCGACAGAAGCCTCTCAT TTCTAAACAGTTATGTGCAGCAAGCCTTGGAAAATGGTGCGTCCCCTTACATTCCAGAGA GTGAACGCTCTGGTGTTATAAGTGTCGGCAGCTACAGAAGCCAAGAACAACAGGAAACAT CTGCCCATACTCTTAGATTTGAGGCCTATGAGATGCCTAAACCTTCGTTGCCACTAGCAA CTTCACAAACCAGCATGTCCACACCACCTACTGATCTGGTTCCAGTTCCAGAGGCAGGCT ACTACAAGGAAGACAATCAAACATCAATGTCTCAACCACCAAGTGATGCAATTTCTGGTG AGTTTGGTGTCAAACTTCGCCTTGATGGTGTTCAAAAGAAATGGGGAAGGCCAACATATT CTTCTTCTACACCCTCAAGCTCGATCTCTAGTCAACCAACACCCAATGGGGCCTCTCATT CTGATGGGGGAGGGTCAAGTTCGCAACCACGGGAGTCATCATACGGTTCTAAGAGACAGC AGGGCACGGAAGTTTCAGCAGAAAAGCAACGGCTGGCTGCTTCACTTTTTGGTTCAGCAG CAGCTAAAGCTGATAGGAAAGCACAAGCTTCTCGAAAGACAGCAAAGGACAGTCCCTCAA CTGAGAAAGTGGCTACCACTAATGTGACTGCCCAGCCTGTTAAGGAGCAAGTAATCCCTG CTGCACCACCGCCTGATCTGCTGGATCTGGGTGATGAGCCTGTTTCATCGAGTCCACCGT CGGCTGACCCTTTCTCACAGCTAGAGGGGCTCCTTGGACCAGCATCGGCTGCCCCGGTGC TTTCTGGAACTCCGGCTACCAGCACTTCCAAAGCACCAGGCCTTCTGTCAATCTTCTCAG ATGATGTACCAACCGGAGTGACTAGTGTGTCCACCGATCCCACTCTAGGTGATGTTAATT CGATGGGCTCCCGCAAAGGAGCAGCTGCAGTGGCTTCAATGAAGGGCCCGAGCCTCCAAG ATGCCTTGCAAAAGGATGCGGCTGCACGACAAGTAGGAGTGACACCAACAGTGAACAACC CCAATCTTTTCAAGGACTTGCTAGGCTGAAGGGGACAGTAGGGCACACCATATGCTCTGT GTGGCCTCTTTGGGTACGTGGAGTTCGTCTCCGACATGGTTCGATCACCGAAACGACGCC GAACTCGCTGTTTGATCAGCGTAGGCTGGGGTTTTAGGGTTACAAGGGCTAATATTTGTT TGAGAGTCACAAGACACGACCTATCTCCTTCCAATTGTGGTTTGTGGAGATTTGTGGATG GTTGCGGGTATTTTTTTTCCTTTACGCTCTTGTAATTTTGTCCTGAGACTGGTGTACATG TGTCTACATGATGTGTAATTTGTACATGAAGACCATGGTCCGTCCAGAAGCGTATGCCGT CGTCTTTTTGTTCA