Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042353_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:3:162856701:162862617:1 gene:Zm00001d042353 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sucrose phosphate synthase2 description: sucrose phosphate synthase2
Sequence	ATGGCGGGGAACGAGTGGATCAATGGGTACCTGGAGGCGATCCTCGACAGCCGCACCTCG TCGGGCGGCGGCGGAGGCGGCGGCGGCGGGGACCCAAGGTCGCCGGTGGCGGGGGCGTCG CCGACGAAGGGGGCGAGCCCCCGCGGCCCGCACATGAACTTCAACCCCTCGCACTACTTC GTCGAGGAGGTGGTCAAGGGCGTCGACGAGAGCGACCTCCACCGGACGTGGATCAAGGTC GTAGCCACGCGCAACGCCCGGGAGCGCAGCACCAGGCTCGAGAACATGTGCTGGCGGATC TGGCACCTCGCGCGCAAGAAGAAACAGCTGGAGTTGGAGGGCATCCAGAGAATCTCGGCA CGCCGGAAGGAACAGGAGCAGGTGCGTCGTGAGGCGACGGAGGACCTGGCCGACGATCTG TCAGAAGGCGAGAAAGGGGACACCCTCGCTGAGCTTGTGCCGGTTGAGGCGGCCAAGAAG AAGTTCCAGAGGAACTTCTCTGACCTTACCGTCTGGTCTGACGACAATAATGAGAAGAAG CTTTACATTGTGCTCATCAGTGTTCATGGTCTTGTTCGTGGCGAAAACATGGAACTAGGT CGTGATTCTGACACCGGTGGCCAGGTGAAATATGTTGTCGAACTTGCAAGAGCAATGTCA ATGATGCCTGGAGTGTACAGGGTGGACCTCTTCACTCGTCAAGTGTCATCTCCTGACGTG GACTGGAGCTATGGTGAGCCGACCGAGATGTTATGCTCCGGTTCCAACGATGGAGAGGGG ATGGGTGAGAGTGCCGGAGCCTACATTGTGCGCATACCGTGTGGACCACGGGATAAATAC CTCAAGAAGGAAGCACTGTGGCCTTACCTCCAAGAGTTTGTCGATGGAGCTCTTGCGCAT ATCCTTAACATGTCCAAGGCTCTGGGAGAACAGGTTGGAAATGGGAGGCCAGTACTGCCT TACGTGATACATGGACACTATGCCGACGCTGGAGATGTTGCTGCTCTCCTTTCCGGTGCG CTCAATGTACCCATGGTGCTCACTGGTCACTCACTTGGGAGGAACAAGCTGGAGCAACTC CTGAAGCAAGGGCGCATGTCCAAGGAGGAGATCGATTCAACATACAAGATCATGAGGCGT ATCGAGGGTGAGGAGCTGGCCCTGGATGCGTCAGAGCTTGTCATCACCAGCACAAGGCAG GAGATTGATGAACAGTGGGGATTGTACGACGGATTTGATGTCAAGCTTGAGAAAGTGTTG AGGGCACGGGCGAGGCGTGGGGTTAGCTGCCATGGTCGTTTCATGCCTAGGATGGTGGTG ATTCCTCCAGGAATGGATTTCAGCAATGTTGTGGTTCATGAAGACATTGATGGGGATGGT GACAGCAAAGATGATATCGTTGGTTTGGAGGGTGCTTCACCGAAGTCAATGCCCCCAATT TGGGCCGAGGTGATGCGGTTCCTAACCAATCCTCACAAGCCGATGATCCTGGCGCTGTCG AGGCCAGACCCGAAGAAGAACATCACTACCCTCGTCAAAGCCTTTGGAGAGTGCCCCCCA CTCAGGGAACTTGCAAACCTTACTCTAATCATGGGAAACAGAGATGACATCGACGATATG TCTGCTGGCAATGCCAGTGTCCTCACCACAGTTCTGAAGCTGATAGACAAGTATGATCTG TATGGAAGCGTAGCGTTTCCTAAGCATCACAATCAGGCTGATGTCCCGGAGATCTACCGC CTCGCGGCCAAAATGAAGGGTGTCTTCATCAACCCTGCTCTCGTTGAGCCGTTCGGTCTC ACCCTGATCGAGGCTGCAGCACACGGACTTCCAATAGTCGCTACCAAGAATGGTGGTCCG GTCGACATTACAACTGCACTGAGCAACGGACTGCTCGTTGACCCGCACGACCAGAACGCC ATCGCTCAAGCACTGCTGAAGCTCGTAGCAGATAAGAACCTGTGGCAGGAATGCCGGAGA AACGGGCTGCGAAACATCCACCTTTACTCATGGCCGGAGCACTGCCGCACTTACCTCACC AGGGTTGCTGGGTGCCGGTTAAGGAACCCGAGGTGGCTGAAGGACACACCAGCAGATGCC GGAGCTGATGAGGAGGAGTTCCTGGAGGATTCCATGGACGCTCAGGACCTGTCACTCCGT CTGTCCATCGACGGTGAGAAGAGCTCGCTGAACACCAACGACCCATTGTCGTCGGACCCG CAGGATCAGGTGCAGAAGATCATGAACAAGATCAATCAGTCGTCAGCACTTCCGCCGTCC ATGTCCTCAGTCGCAGACGGTGCCAAGAACGCAACCGAGGCCACGGGCAGCACCTTGAAC AAGTACCCACTCCTGCGCCGGCGCCGGCGCCTGTTCGTCATCGCCGTGGACTGCTACCAA GACGACGGCCGTGCTAGCAAGAAGATGCTGCAGGTGATCCAGGAAGTTTTCAGAGCAGTC CGATCGGACTCCCAGATGTCCAAGATCTCAGGGTTCGCGCTGTCCACTGCGATGCCGTTG TCCGAAACACTCCAGCTTCTGCAGCTCGGCAAGATCCCAGCGACCGACTTCGACACCCTC ATCTGTGGCAGTGGCAGCGAGGTCTACTATCCTGGCACAGTGAACTGCGTCGACGCTGAA GGAAAGCTGCGCCCAGACCAGGACTATCTGATGCACATCAGCCACCGCTGGTCCCATGAC GGCGCGAAGCAGACCATAGCGAAGCTCATGGCCACTCAGGACGGTTCAGGCGACACTGTC GAGCTGGACCCGGCGTCTAGTAATGCACACTGCTTCACGTTCCTTATCAAAGATCCCAAA AAGGTGAAAACGGTCGATGAGATGAGGGAGAGGCTGAGGATGCGTGGTCTCCGGTGCCAC ATCATGTACTGCAGGAACTCGACAAGGCTTCAGGTTGTCCCTCTGCTAGCATCAAGGTCA CAGGCACTCAGGTATCTTTTTGTGCGCTGGGGCCTATATGTGGGGAACATGTATCTGATC ACTGGGGAACATGGCGACACCGATCATGAGGAGATGCTATCTGGATTACACAAGACTGTG ATCGTCCGGGGTGTCACCGAGAAAGGTTCGGAAGGGCTGCTGAGGAGCCCAGGAAGCTAC AAGAAGGACGACGTCGTGCCGTCTGAGACCCCCTTGGCTGCGTACACGACTGGTGAGATG AAGGCCGATGAGATCATGCGAGCTCTGAAACAAGTCTCCAAGACTTCCAGCGGCATGTGA

Peptide Sequence

PEP ID	Zm00001d042353_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:3:162856701:162862617:1 gene:Zm00001d042353 transcript:Zm00001d042353_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sucrose phosphate synthase2 description: sucrose phosphate synthase2
Sequence	MAGNEWINGYLEAILDSRTSSGGGGGGGGGDPRSPVAGASPTKGASPRGPHMNFNPSHYF VEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQLELEGIQRISA RRKEQEQVRREATEDLADDLSEGEKGDTLAELVPVEAAKKKFQRNFSDLTVWSDDNNEKK LYIVLISVHGLVRGENMELGRDSDTGGQVKYVVELARAMSMMPGVYRVDLFTRQVSSPDV DWSYGEPTEMLCSGSNDGEGMGESAGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAH ILNMSKALGEQVGNGRPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQL LKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQWGLYDGFDVKLEKVL RARARRGVSCHGRFMPRMVVIPPGMDFSNVVVHEDIDGDGDSKDDIVGLEGASPKSMPPI WAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECPPLRELANLTLIMGNRDDIDDM SAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGVFINPALVEPFGL TLIEAAAHGLPIVATKNGGPVDITTALSNGLLVDPHDQNAIAQALLKLVADKNLWQECRR NGLRNIHLYSWPEHCRTYLTRVAGCRLRNPRWLKDTPADAGADEEEFLEDSMDAQDLSLR LSIDGEKSSLNTNDPLSSDPQDQVQKIMNKINQSSALPPSMSSVADGAKNATEATGSTLN KYPLLRRRRRLFVIAVDCYQDDGRASKKMLQVIQEVFRAVRSDSQMSKISGFALSTAMPL SETLQLLQLGKIPATDFDTLICGSGSEVYYPGTVNCVDAEGKLRPDQDYLMHISHRWSHD GAKQTIAKLMATQDGSGDTVELDPASSNAHCFTFLIKDPKKVKTVDEMRERLRMRGLRCH IMYCRNSTRLQVVPLLASRSQALRYLFVRWGLYVGNMYLITGEHGDTDHEEMLSGLHKTV IVRGVTEKGSEGLLRSPGSYKKDDVVPSETPLAAYTTGEMKADEIMRALKQVSKTSSGM

Transcript Sequence

Transcript ID	Zm00001d042353_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:162856701:162862617:1 gene:Zm00001d042353 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sucrose phosphate synthase2 description: sucrose phosphate synthase2
Sequence	ACGCGCGAGGCGAAAAGCGGGCGGGTGGAAGAAGCGTGGGCGCCTGGGTTAACGCTCCCG CAGCGAGTGATCTGAGAGCGGTAGAGGCCGGCCGGAACCGCGGAAGAGGAGAGGCCGGGG GATCCGACGATGGCGGGGAACGAGTGGATCAATGGGTACCTGGAGGCGATCCTCGACAGC CGCACCTCGTCGGGCGGCGGCGGAGGCGGCGGCGGCGGGGACCCAAGGTCGCCGGTGGCG GGGGCGTCGCCGACGAAGGGGGCGAGCCCCCGCGGCCCGCACATGAACTTCAACCCCTCG CACTACTTCGTCGAGGAGGTGGTCAAGGGCGTCGACGAGAGCGACCTCCACCGGACGTGG ATCAAGGTCGTAGCCACGCGCAACGCCCGGGAGCGCAGCACCAGGCTCGAGAACATGTGC TGGCGGATCTGGCACCTCGCGCGCAAGAAGAAACAGCTGGAGTTGGAGGGCATCCAGAGA ATCTCGGCACGCCGGAAGGAACAGGAGCAGGTGCGTCGTGAGGCGACGGAGGACCTGGCC GACGATCTGTCAGAAGGCGAGAAAGGGGACACCCTCGCTGAGCTTGTGCCGGTTGAGGCG GCCAAGAAGAAGTTCCAGAGGAACTTCTCTGACCTTACCGTCTGGTCTGACGACAATAAT GAGAAGAAGCTTTACATTGTGCTCATCAGTGTTCATGGTCTTGTTCGTGGCGAAAACATG GAACTAGGTCGTGATTCTGACACCGGTGGCCAGGTGAAATATGTTGTCGAACTTGCAAGA GCAATGTCAATGATGCCTGGAGTGTACAGGGTGGACCTCTTCACTCGTCAAGTGTCATCT CCTGACGTGGACTGGAGCTATGGTGAGCCGACCGAGATGTTATGCTCCGGTTCCAACGAT GGAGAGGGGATGGGTGAGAGTGCCGGAGCCTACATTGTGCGCATACCGTGTGGACCACGG GATAAATACCTCAAGAAGGAAGCACTGTGGCCTTACCTCCAAGAGTTTGTCGATGGAGCT CTTGCGCATATCCTTAACATGTCCAAGGCTCTGGGAGAACAGGTTGGAAATGGGAGGCCA GTACTGCCTTACGTGATACATGGACACTATGCCGACGCTGGAGATGTTGCTGCTCTCCTT TCCGGTGCGCTCAATGTACCCATGGTGCTCACTGGTCACTCACTTGGGAGGAACAAGCTG GAGCAACTCCTGAAGCAAGGGCGCATGTCCAAGGAGGAGATCGATTCAACATACAAGATC ATGAGGCGTATCGAGGGTGAGGAGCTGGCCCTGGATGCGTCAGAGCTTGTCATCACCAGC ACAAGGCAGGAGATTGATGAACAGTGGGGATTGTACGACGGATTTGATGTCAAGCTTGAG AAAGTGTTGAGGGCACGGGCGAGGCGTGGGGTTAGCTGCCATGGTCGTTTCATGCCTAGG ATGGTGGTGATTCCTCCAGGAATGGATTTCAGCAATGTTGTGGTTCATGAAGACATTGAT GGGGATGGTGACAGCAAAGATGATATCGTTGGTTTGGAGGGTGCTTCACCGAAGTCAATG CCCCCAATTTGGGCCGAGGTGATGCGGTTCCTAACCAATCCTCACAAGCCGATGATCCTG GCGCTGTCGAGGCCAGACCCGAAGAAGAACATCACTACCCTCGTCAAAGCCTTTGGAGAG TGCCCCCCACTCAGGGAACTTGCAAACCTTACTCTAATCATGGGAAACAGAGATGACATC GACGATATGTCTGCTGGCAATGCCAGTGTCCTCACCACAGTTCTGAAGCTGATAGACAAG TATGATCTGTATGGAAGCGTAGCGTTTCCTAAGCATCACAATCAGGCTGATGTCCCGGAG ATCTACCGCCTCGCGGCCAAAATGAAGGGTGTCTTCATCAACCCTGCTCTCGTTGAGCCG TTCGGTCTCACCCTGATCGAGGCTGCAGCACACGGACTTCCAATAGTCGCTACCAAGAAT GGTGGTCCGGTCGACATTACAACTGCACTGAGCAACGGACTGCTCGTTGACCCGCACGAC CAGAACGCCATCGCTCAAGCACTGCTGAAGCTCGTAGCAGATAAGAACCTGTGGCAGGAA TGCCGGAGAAACGGGCTGCGAAACATCCACCTTTACTCATGGCCGGAGCACTGCCGCACT TACCTCACCAGGGTTGCTGGGTGCCGGTTAAGGAACCCGAGGTGGCTGAAGGACACACCA GCAGATGCCGGAGCTGATGAGGAGGAGTTCCTGGAGGATTCCATGGACGCTCAGGACCTG TCACTCCGTCTGTCCATCGACGGTGAGAAGAGCTCGCTGAACACCAACGACCCATTGTCG TCGGACCCGCAGGATCAGGTGCAGAAGATCATGAACAAGATCAATCAGTCGTCAGCACTT CCGCCGTCCATGTCCTCAGTCGCAGACGGTGCCAAGAACGCAACCGAGGCCACGGGCAGC ACCTTGAACAAGTACCCACTCCTGCGCCGGCGCCGGCGCCTGTTCGTCATCGCCGTGGAC TGCTACCAAGACGACGGCCGTGCTAGCAAGAAGATGCTGCAGGTGATCCAGGAAGTTTTC AGAGCAGTCCGATCGGACTCCCAGATGTCCAAGATCTCAGGGTTCGCGCTGTCCACTGCG ATGCCGTTGTCCGAAACACTCCAGCTTCTGCAGCTCGGCAAGATCCCAGCGACCGACTTC GACACCCTCATCTGTGGCAGTGGCAGCGAGGTCTACTATCCTGGCACAGTGAACTGCGTC GACGCTGAAGGAAAGCTGCGCCCAGACCAGGACTATCTGATGCACATCAGCCACCGCTGG TCCCATGACGGCGCGAAGCAGACCATAGCGAAGCTCATGGCCACTCAGGACGGTTCAGGC GACACTGTCGAGCTGGACCCGGCGTCTAGTAATGCACACTGCTTCACGTTCCTTATCAAA GATCCCAAAAAGGTGAAAACGGTCGATGAGATGAGGGAGAGGCTGAGGATGCGTGGTCTC CGGTGCCACATCATGTACTGCAGGAACTCGACAAGGCTTCAGGTTGTCCCTCTGCTAGCA TCAAGGTCACAGGCACTCAGGTATCTTTTTGTGCGCTGGGGCCTATATGTGGGGAACATG TATCTGATCACTGGGGAACATGGCGACACCGATCATGAGGAGATGCTATCTGGATTACAC AAGACTGTGATCGTCCGGGGTGTCACCGAGAAAGGTTCGGAAGGGCTGCTGAGGAGCCCA GGAAGCTACAAGAAGGACGACGTCGTGCCGTCTGAGACCCCCTTGGCTGCGTACACGACT GGTGAGATGAAGGCCGATGAGATCATGCGAGCTCTGAAACAAGTCTCCAAGACTTCCAGC GGCATGTGAATTAGCTGCTGGGAAAGGTCGATCTCTAATATATTCTTCTTGTTCATAACT CAAACGGCAGACACATTTTCTCCTTTTCTTCACTAGTACTACATAAATAACTTGTGAACA GTACCGAGGGTGTATATATTGCAGTGACAAATAACTAGGACACTGCTAATTCTACTGCTG GCTCACCACTGTCTTGGTGAGATGTAGCCCTACAAGATTGTATACTGTGTATTTCTCTAG TCGCAGCTAGGCATACTTTGTTTTTTAAAAAAAGAACTTCAGTTTACTGCATACTCAAGG AAACGAAATGACAGTAAAAGTCAGGGT