Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042313_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:3:160480729:160486864:-1 gene:Zm00001d042313 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CAMTA-transcription factor 3 description:Calmodulin-binding transcription activator 4
Sequence	ATGCAGCAGCAGCAGCAAGGCTTAGACATAGGCAAGCTACAAGAGGTAGTGAAGACCCGC TGGCTAAAGCCTCAAGAAGTTCTCAAGATACTGCAGAATCATGAGCTGTTCACGATTTCG CATAAGCCCCCTCAGAAGCCACAGAGTGGTTCTTGGTTTCTTTTCAACCGTAGAGTACTC CGGTACTTCCGAAATGATGGATTTGAATGGCAAAAGAAGAGAAATGGGAAGACCATTAAT GAAGCCCATGAGCGCCTTAAGGTTGATAATGTGGATGCACTGAATTGCTACTATGCTCGT GGAGACAAAAATCCAACATTTCAGAGGCGGATATATTGGATGCTTGATCCGGCTTATGAA CACATTGTCCTTGTCCACTATAGGGATGTTCTAGAGGGCAGCATTTCAGTATCTGCACGA AATGATTCTTCAACATTGAATCAGAATGGCAGTGCTAGCAGAGCTGAAGTACATAGTTCA CCTGGTTGGACAAGCGAGTTAATTGCACATTGTACTAATTCGTGCAGTCCGGGATCTGCT GAAGAAGTCAGTTCCCAAATTAGTGCAAGTGAATCTGATTTGATTCAACATAAGGCAGCC TTGCGGAAGCTTAAAATGCAGCTGAGTCTGGAAGACAAAGAAGATTGTGATGTTAATGCC GAGGATGTTCCAGCAGATAATGAGCCTATTATTTTACCTGTGATTCAGAATGAGGAGCCA GGCACTTCTAGAAATCATGATGATATCTTTGATGTGCTGGACTTTAGTGAAGATCATATC AACGGAACTGGAACCCATCCATGTCACAGTGCTATTGACGTGCTAAAAAATTCAGACACA TGGTTAGAGGATGATCAACTTGAGGCAATTCTGCATCCAGCGTGTATGACATTGACTGAA AATCAATGGTTCAGGATACATGAGGTTTCTCCAGAATCAGCGTTTTCTTATGAAAGTACA AAGGTTATCATTGTAGGAGACTTCCTTTGCAATCCCCCTCACAGTTCATGGCAAGTGCTG TTTGGTGATGTTAAGGTATGTGTGGAAATTATCCAGCAAGGTGTCATCCGTTGCCATACT CCATGCCTTGATGCTGGAAAAGTGAGAATGTGCTTGCTTGATGGGAATGGGAAGTCCTGC AGTGAAGCACGAGAATTTGAATTCCTTGAAAAGCCTACCAAATGCATGATTGATGGAAAC ACGAACCCCTGCAATGAAGCACAAGATGTCAAACTGCATCAGATACCTACCAAAAGTAGT GAGGAGCTGTCACTGTTACTACATTATGTGCATACACTTTTTGATGGTCATGCTAGTGGG CTATTTTCAAATTTTAGCTTGCCACTCCAAAATCTTGGCTGTGGAATCCAAAGCAATCAA ATGGATGTTATGAAGAAGGCGTATAAGCAGCTGGACCCTGAGAATGTGGTAAGTAGTGTC ATGGAAGTATTGCTTAATGACAAGTTTAAGCAATGGTTGTCATCCAAATGTGAACAGAAT ATTGATGGAGACCATTTGCTTCCTAAGCAATACCGCAATATTATACATACGGTTGCAGCC TTGGGATATGATTTGGCTTTGAAGCCACTGCTTAGTTCAGGAGTGCCTATAAACTACCGT GATGCAAATGGATGGACTGCTCTACATTGGGCTGCAAGGTTTGGCAGAGAAGATATGGTG GTGGCTCTTCTTACTGCTGGTGCTGCAGCTGGTGCACTTTCACATCCGACATCAGAGGAT CCTGCTGCCAAAACACCTGCTTCAATAGCTTTAGCATATGGTTTCAAGGGCCTATCCGCG TTCCTTTCAGAAGCACAATTAACAACTCATCTTGATTCTATCGAGTCAAAAGAAAATGGA AAACTTGATTCTAGGGAAGAGGGGATATGTCGTGCTGTGGACAGAATATCAGACAAAAGC AGCCACGTGCATGGTGGAACTGATGATCAGCTTGCGCTTAAGGATTCCCTGGGAGCTGTC CGGAATGCAGTTCAGGCTGCAGGGCGCATACAAGCTGCATTCCGAATTTTTTCCTTTAAG AAGAAGAAAGAGATGGCTCTTGGGAACAGAAATAGCTGCTGCTTGTCCATTAGTGAGGCA GGAGCAGTTTCACATGATATGCTGGAGAAAGCTGTATTATCTATCCAGAAGAACTTCAGG TGCTGGAAAAAACGTAAAGAATTCCTGAAGATGCGAAATAATGTTGTCAGGATACAGGCC CGGGTGCGAGCTCATCAAGAAAGAAACAAGTACAAGGAATTGATTTCAAGTGTCGGAATC CTTGAGAAGGTGATGATACGGTGGTACCATAAAGGTGTTGGTCTGCGTGGATTCAATTCT GGGGCAATGACAATCGATGAAGAGGTGGACGAAGACGTTGCCAAGGTCTTCCGGAAGCTC AGAGTGGAAACAGCCATCGATGAAGCTGTTTCAAGGGTATCATGTATCATTGGTAGCCCT AAAGCAATGCATCAGTACCGAAGGATGCTCAATAGGTACCAACAAACAAAGGATGATCAG GAGAAGTAA

Peptide Sequence

PEP ID	Zm00001d042313_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:3:160480729:160486864:-1 gene:Zm00001d042313 transcript:Zm00001d042313_T012 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CAMTA-transcription factor 3 description:Calmodulin-binding transcription activator 4
Sequence	MQQQQQGLDIGKLQEVVKTRWLKPQEVLKILQNHELFTISHKPPQKPQSGSWFLFNRRVL RYFRNDGFEWQKKRNGKTINEAHERLKVDNVDALNCYYARGDKNPTFQRRIYWMLDPAYE HIVLVHYRDVLEGSISVSARNDSSTLNQNGSASRAEVHSSPGWTSELIAHCTNSCSPGSA EEVSSQISASESDLIQHKAALRKLKMQLSLEDKEDCDVNAEDVPADNEPIILPVIQNEEP GTSRNHDDIFDVLDFSEDHINGTGTHPCHSAIDVLKNSDTWLEDDQLEAILHPACMTLTE NQWFRIHEVSPESAFSYESTKVIIVGDFLCNPPHSSWQVLFGDVKVCVEIIQQGVIRCHT PCLDAGKVRMCLLDGNGKSCSEAREFEFLEKPTKCMIDGNTNPCNEAQDVKLHQIPTKSS EELSLLLHYVHTLFDGHASGLFSNFSLPLQNLGCGIQSNQMDVMKKAYKQLDPENVVSSV MEVLLNDKFKQWLSSKCEQNIDGDHLLPKQYRNIIHTVAALGYDLALKPLLSSGVPINYR DANGWTALHWAARFGREDMVVALLTAGAAAGALSHPTSEDPAAKTPASIALAYGFKGLSA FLSEAQLTTHLDSIESKENGKLDSREEGICRAVDRISDKSSHVHGGTDDQLALKDSLGAV RNAVQAAGRIQAAFRIFSFKKKKEMALGNRNSCCLSISEAGAVSHDMLEKAVLSIQKNFR CWKKRKEFLKMRNNVVRIQARVRAHQERNKYKELISSVGILEKVMIRWYHKGVGLRGFNS GAMTIDEEVDEDVAKVFRKLRVETAIDEAVSRVSCIIGSPKAMHQYRRMLNRYQQTKDDQ EK

Transcript Sequence

Transcript ID	Zm00001d042313_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:160480729:160486864:-1 gene:Zm00001d042313 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CAMTA-transcription factor 3 description:Calmodulin-binding transcription activator 4
Sequence	GCCGACGCCGCAGCTGTTGATCTATAATCCGCCACCTCAAACAACAGAAAAAGCAAAAAT TCCCCCTCTCGTGGTTAGCAACCGCCGCGCTGGAATCTGTCGCGCACTTTCCCCGCTTTC CTCCGCCCTGCTCTCACGTGTTCATCGTTGGTTCTCACTCCCCTTCTCGCCCCCTTCAAC ACTCCGCGCTTCTGCGCGTCATTGCCAGCGGAGGCGCGTCGCTATCGCCTGGGAACAATA AGAGTTTGCGCGTCTCGCGACTGATCGGTGGCGACTGCCACTCGGCGGCGACTTGGACTC GACTTCCGGGCAACAGGGCGAGGAGTCGGCCGGCCAGTCCACTGGGTTCAAATCGGCCTC GGCACCGCGGCGCCCCCCCGCGAGTTCTTGCTGGATTCGCTCGGAGCACGGCGCGGGCTT GTCGGCACGGCGCCATGCAGCAGCAGCAGCAAGGCTTAGACATAGGCAAGCTACAAGAGG TAGTGAAGACCCGCTGGCTAAAGCCTCAAGAAGTTCTCAAGATACTGCAGAATCATGAGC TGTTCACGATTTCGCATAAGCCCCCTCAGAAGCCACAGAGTGGTTCTTGGTTTCTTTTCA ACCGTAGAGTACTCCGGTACTTCCGAAATGATGGATTTGAATGGCAAAAGAAGAGAAATG GGAAGACCATTAATGAAGCCCATGAGCGCCTTAAGGTTGATAATGTGGATGCACTGAATT GCTACTATGCTCGTGGAGACAAAAATCCAACATTTCAGAGGCGGATATATTGGATGCTTG ATCCGGCTTATGAACACATTGTCCTTGTCCACTATAGGGATGTTCTAGAGGGCAGCATTT CAGTATCTGCACGAAATGATTCTTCAACATTGAATCAGAATGGCAGTGCTAGCAGAGCTG AAGTACATAGTTCACCTGGTTGGACAAGCGAGTTAATTGCACATTGTACTAATTCGTGCA GTCCGGGATCTGCTGAAGAAGTCAGTTCCCAAATTAGTGCAAGTGAATCTGATTTGATTC AACATAAGGCAGCCTTGCGGAAGCTTAAAATGCAGCTGAGTCTGGAAGACAAAGAAGATT GTGATGTTAATGCCGAGGATGTTCCAGCAGATAATGAGCCTATTATTTTACCTGTGATTC AGAATGAGGAGCCAGGCACTTCTAGAAATCATGATGATATCTTTGATGTGCTGGACTTTA GTGAAGATCATATCAACGGAACTGGAACCCATCCATGTCACAGTGCTATTGACGTGCTAA AAAATTCAGACACATGGTTAGAGGATGATCAACTTGAGGCAATTCTGCATCCAGCGTGTA TGACATTGACTGAAAATCAATGGTTCAGGATACATGAGGTTTCTCCAGAATCAGCGTTTT CTTATGAAAGTACAAAGGTTATCATTGTAGGAGACTTCCTTTGCAATCCCCCTCACAGTT CATGGCAAGTGCTGTTTGGTGATGTTAAGGTATGTGTGGAAATTATCCAGCAAGGTGTCA TCCGTTGCCATACTCCATGCCTTGATGCTGGAAAAGTGAGAATGTGCTTGCTTGATGGGA ATGGGAAGTCCTGCAGTGAAGCACGAGAATTTGAATTCCTTGAAAAGCCTACCAAATGCA TGATTGATGGAAACACGAACCCCTGCAATGAAGCACAAGATGTCAAACTGCATCAGATAC CTACCAAAAGTAGTGAGGAGCTGTCACTGTTACTACATTATGTGCATACACTTTTTGATG GTCATGCTAGTGGGCTATTTTCAAATTTTAGCTTGCCACTCCAAAATCTTGGCTGTGGAA TCCAAAGCAATCAAATGGATGTTATGAAGAAGGCGTATAAGCAGCTGGACCCTGAGAATG TGGTAAGTAGTGTCATGGAAGTATTGCTTAATGACAAGTTTAAGCAATGGTTGTCATCCA AATGTGAACAGAATATTGATGGAGACCATTTGCTTCCTAAGCAATACCGCAATATTATAC ATACGGTTGCAGCCTTGGGATATGATTTGGCTTTGAAGCCACTGCTTAGTTCAGGAGTGC CTATAAACTACCGTGATGCAAATGGATGGACTGCTCTACATTGGGCTGCAAGGTTTGGCA GAGAAGATATGGTGGTGGCTCTTCTTACTGCTGGTGCTGCAGCTGGTGCACTTTCACATC CGACATCAGAGGATCCTGCTGCCAAAACACCTGCTTCAATAGCTTTAGCATATGGTTTCA AGGGCCTATCCGCGTTCCTTTCAGAAGCACAATTAACAACTCATCTTGATTCTATCGAGT CAAAAGAAAATGGAAAACTTGATTCTAGGGAAGAGGGGATATGTCGTGCTGTGGACAGAA TATCAGACAAAAGCAGCCACGTGCATGGTGGAACTGATGATCAGCTTGCGCTTAAGGATT CCCTGGGAGCTGTCCGGAATGCAGTTCAGGCTGCAGGGCGCATACAAGCTGCATTCCGAA TTTTTTCCTTTAAGAAGAAGAAAGAGATGGCTCTTGGGAACAGAAATAGCTGCTGCTTGT CCATTAGTGAGGCAGGAGCAGTTTCACATGATATGCTGGAGAAAGCTGTATTATCTATCC AGAAGAACTTCAGGTGCTGGAAAAAACGTAAAGAATTCCTGAAGATGCGAAATAATGTTG TCAGGATACAGGCCCGGGTGCGAGCTCATCAAGAAAGAAACAAGTACAAGGAATTGATTT CAAGTGTCGGAATCCTTGAGAAGGTGATGATACGGTGGTACCATAAAGGTGTTGGTCTGC GTGGATTCAATTCTGGGGCAATGACAATCGATGAAGAGGTGGACGAAGACGTTGCCAAGG TCTTCCGGAAGCTCAGAGTGGAAACAGCCATCGATGAAGCTGTTTCAAGGGTATCATGTA TCATTGGTAGCCCTAAAGCAATGCATCAGTACCGAAGGATGCTCAATAGGTACCAACAAA CAAAGGATGATCAGGAGAAGTAATGCTTGTGTTAAACCAACAGTGATGGAGCAAACAGCA AAGCACAAGCCACCCACTATTTATTTATCTCCCTTACTGAAGCACAAGCCTTGGTGACTG AATGGACAGTGGATCCCGAGTAAAACTGAAAATTTCTTGGGTGAACTAGAACCAGCTCCA ATTCATGCTGGACGCTGTTTGAGTGTACACAGCAACGTCATGTGCAATAGCTGACTTCTG GCTGAAAGTTGGTAAAGGCGATGACTTAGTGGTATATGCAGAAGCTTCCAAAAGCCTGAT GAGCAAGGTAGATGAGGTCTGAGAAACACTGCATTCGATATATATATGCCTTATGTACTA CCTTCATGCAGTAGGTTTGTAGTAAATTTGTGCGTAACTCTTCTTCTGCGTATTCCAGAA AAAAAGTTTGTAGTAAATTTGTACTATATGGTAGTAAATAGGGGTCAACTATTGTAATTT GTAGCACAATGAATCTTGTAAGAAATCTCAGTTT