Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042303_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:160015501:160021474:-1 gene:Zm00001d042303 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy6a description:Beclin 1 protein%3B Beclin-1-like protein
Sequence	ATGAAGCCCCCGGCCGGCGCCAGCGGCAAGGGCGGCGCGGTGGACCCCTCTCTGCCGCGG TTCAGGTGCCAGGAGTGCCGCCGCGCCCTCGTCGTCGTCGGGGTCGAGTCCTACGCCGAC AGACTGCCCGCACACGCCGCGCCCGGTAATCATGCATCTTCTGTTCAGGGCAGTGTTATG GGTGCAAGCAAGATGGACAACTCTTATGTTGTGCTATCTAGACAGAACAAATCTCAGGGT CCTAGAATTCCTCCACGCCCACCAAGTGCAGCAGCGGCACATGCTGATCCCAGCCAATCA ACAAGAGCGATAGAGGGGTCATATATAGTGCTTCCACCTCCTGCCGCTTCCATATACAGG ACATCTGCCTCTGAAGGTGGTGCACAGCTCACACCATCAGGTGTAATCTCCAGTAGCCCC TCGCTGGGAAACAATTCTGGGTTTCACTCTAGTGTTACTGTGCTGAAAAGGGCCTTTGAG ATTGCTAGCTCGCAAACTCAGGTTGAACAGCCACTTTGTCTGGAATGTATGAGGGTTCTT TCTGATAAGATGGATAAGGAGATTGAAGATGTTAATGCTGATATTAAAGCTTATGAGGCT TGTCTTCAACGTTTGGAGCAGGAACCTTACAACATCCTCAGTGAAACAGATTTTCAAAAG GAGAAACAAAAGATTGAGGAAGAGGAAAAGAAACTTAAAGCTGCTATTGAAGAAGCTGAA AAACAATATTCAGAAGTTAGATCTGAGATGGAAAATCTTGAAATAAAGTCTAAACAATTT GAGGAATTGGAAGAGCGGTATTGGCATGAATTCAACAGTTTTCAGTTTCAGTTGACATCT CACCAGGAAGAAAGAGATGCAGTTTTTGCCAAGATAGAAGTTTCTCAGGTTCATTTGGAA CTGTTGAAGCGTACTAATGTTCTCAATGATGCATTCTATATATCACATGATGGAGTAATC GGAACAATAAATAACTTTCGCCTAGGACGTCTTTCTAATGTAGAGGTTGAGTGGGATGAG ATAAATGCTGCATGGGGTCAGGCTGCACTGCTGTTGCATACCATGGCTCAGTATTTCACC CCAAAATTCCAATACCGGATCAAGATTCACCCTATGGGAAGCTATCCAAGAGTCACAGAC ATCCAGAATAACACATATGAACTGTTTGGTCCCGTGAATTTGTTCTGGAGCACCCGATTT GACAAAGCCATGACATGGTTTCTTACTTGCCTGCAAGAGTTTGCTGAGTTTGCCATAAGT TTGGATAAGCAGAACAATGTTCCCCCTGAAAAATCACTGAAGCTTCCCTACAAGATTGAT GGTGACAAAGTAGGGAGCCACACGATCGTCCTTAGTTTCAATAAGAATGAAAACTGGACC AAGGCTCTAAAGTACATGCTGTGCAATCTGAAGTGGGTTCTCTACTGGTTTATTGGCAAT ACAAGTTTTGCACCACCCTCTGTATCACTGCACACACAATCTCTGAAGAACAAGAGTTGA

Peptide Sequence

PEP ID	Zm00001d042303_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:160015501:160021474:-1 gene:Zm00001d042303 transcript:Zm00001d042303_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy6a description:Beclin 1 protein%3B Beclin-1-like protein
Sequence	MKPPAGASGKGGAVDPSLPRFRCQECRRALVVVGVESYADRLPAHAAPGNHASSVQGSVM GASKMDNSYVVLSRQNKSQGPRIPPRPPSAAAAHADPSQSTRAIEGSYIVLPPPAASIYR TSASEGGAQLTPSGVISSSPSLGNNSGFHSSVTVLKRAFEIASSQTQVEQPLCLECMRVL SDKMDKEIEDVNADIKAYEACLQRLEQEPYNILSETDFQKEKQKIEEEEKKLKAAIEEAE KQYSEVRSEMENLEIKSKQFEELEERYWHEFNSFQFQLTSHQEERDAVFAKIEVSQVHLE LLKRTNVLNDAFYISHDGVIGTINNFRLGRLSNVEVEWDEINAAWGQAALLLHTMAQYFT PKFQYRIKIHPMGSYPRVTDIQNNTYELFGPVNLFWSTRFDKAMTWFLTCLQEFAEFAIS LDKQNNVPPEKSLKLPYKIDGDKVGSHTIVLSFNKNENWTKALKYMLCNLKWVLYWFIGN TSFAPPSVSLHTQSLKNKS

Transcript Sequence

Transcript ID	Zm00001d042303_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:160015501:160021474:-1 gene:Zm00001d042303 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy6a description:Beclin 1 protein%3B Beclin-1-like protein
Sequence	AGAGGGGAAATAAAATCTCCCCGTCTCGCTGCTGCGTGCCTGCGGGGACACTCCATCTCC TCCTCCAGACCTCCACGATCCGGCCTCCCCCACCTCTCGCCGGCCGAGGACGATCCGCCG GCATCAGAGCGCGCGCCCCGGAGCCGAAAAGCGGGGGGCGTCATGAAGCCCCCGGCCGGC GCCAGCGGCAAGGGCGGCGCGGTGGACCCCTCTCTGCCGCGGTTCAGGTGCCAGGAGTGC CGCCGCGCCCTCGTCGTCGTCGGGGTCGAGTCCTACGCCGACAGACTGCCCGCACACGCC GCGCCCGGTAATCATGCATCTTCTGTTCAGGGCAGTGTTATGGGTGCAAGCAAGATGGAC AACTCTTATGTTGTGCTATCTAGACAGAACAAATCTCAGGGTCCTAGAATTCCTCCACGC CCACCAAGTGCAGCAGCGGCACATGCTGATCCCAGCCAATCAACAAGAGCGATAGAGGGG TCATATATAGTGCTTCCACCTCCTGCCGCTTCCATATACAGGACATCTGCCTCTGAAGGT GGTGCACAGCTCACACCATCAGGTGTAATCTCCAGTAGCCCCTCGCTGGGAAACAATTCT GGGTTTCACTCTAGTGTTACTGTGCTGAAAAGGGCCTTTGAGATTGCTAGCTCGCAAACT CAGGTTGAACAGCCACTTTGTCTGGAATGTATGAGGGTTCTTTCTGATAAGATGGATAAG GAGATTGAAGATGTTAATGCTGATATTAAAGCTTATGAGGCTTGTCTTCAACGTTTGGAG CAGGAACCTTACAACATCCTCAGTGAAACAGATTTTCAAAAGGAGAAACAAAAGATTGAG GAAGAGGAAAAGAAACTTAAAGCTGCTATTGAAGAAGCTGAAAAACAATATTCAGAAGTT AGATCTGAGATGGAAAATCTTGAAATAAAGTCTAAACAATTTGAGGAATTGGAAGAGCGG TATTGGCATGAATTCAACAGTTTTCAGTTTCAGTTGACATCTCACCAGGAAGAAAGAGAT GCAGTTTTTGCCAAGATAGAAGTTTCTCAGGTTCATTTGGAACTGTTGAAGCGTACTAAT GTTCTCAATGATGCATTCTATATATCACATGATGGAGTAATCGGAACAATAAATAACTTT CGCCTAGGACGTCTTTCTAATGTAGAGGTTGAGTGGGATGAGATAAATGCTGCATGGGGT CAGGCTGCACTGCTGTTGCATACCATGGCTCAGTATTTCACCCCAAAATTCCAATACCGG ATCAAGATTCACCCTATGGGAAGCTATCCAAGAGTCACAGACATCCAGAATAACACATAT GAACTGTTTGGTCCCGTGAATTTGTTCTGGAGCACCCGATTTGACAAAGCCATGACATGG TTTCTTACTTGCCTGCAAGAGTTTGCTGAGTTTGCCATAAGTTTGGATAAGCAGAACAAT GTTCCCCCTGAAAAATCACTGAAGCTTCCCTACAAGATTGATGGTGACAAAGTAGGGAGC CACACGATCGTCCTTAGTTTCAATAAGAATGAAAACTGGACCAAGGCTCTAAAGTACATG CTGTGCAATCTGAAGTGGGTTCTCTACTGGTTTATTGGCAATACAAGTTTTGCACCACCC TCTGTATCACTGCACACACAATCTCTGAAGAACAAGAGTTGATGCTGTTCTCTCTCTGCA ACAACTGTACATAGTTTGTGTACTCGACCCTATTCGTTGGATATAGCCGCAGTGACAATA ATGACACGTTTGATGTGCATTTGTTTATTGCTTGAAATCTGCCATGATGTGTTTATTGTA CAATCTAAATCTCAGGAACTACATTTTCACCCTTAGGTAACGCCTCCAACATTACGTTTT GAAAAAACAATGCAAAAACAGTGTTTTAGGTGACA