Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042291_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:159321899:159326381:1 gene:Zm00001d042291 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENTH/VHS family protein
Sequence

ATGTGCACTGCTGTTCGCGCCCACCGTGGATGCCCGCGCCTCAGCTCTCCTGGCATCGCG
GGCCCGTTGTTGGTGCGCATAGGTGCGGCCCCACATGACACATCTCAATTTTTTTTCTCA
ATGTTACAGATTGACATATGGGAAGACCGTAAAATATTTGATACTCAGGCACAAAGCCTC
AAAGATGACTTTTTCAGAAGGTTAAAGGACATTAGAAACAAATTGAAAAATACGGGCAGT
GAGCTGCTGGAGAAGGTTGTCTCTAGCTACAAACATGTCCTGAATGCTCCTATGGATGAG
GATACTCTGATGCGAAAATGCCAAGCAGCTCTTATCAATTTTGATGAACTCAATAAAACG
TATGGAAACAACTCTGTTTTAGGTAGCAGCAATCAATCGGAATTTATGCAGGGGGTGCAG
GAACAACACAACATTCTCAGAAACTCCATTGAACAACTCAAATTGTCAGAATCACTCAGG
GCCACTCTGATTTCTCATTTGAAGGAAGCGCTGAATGAGCAGGAGCTCAAAGTGGAACAA
GTCAGAAGCCTGCTTCAGGCAGCTCAGCCTCGATTCAAGAGAGCTGCTGAGCTCTGCGTG
GGGCTTGGAAGCAACATGGAAATGCATGAGCCATCAAATCAAGGGCATAAGAGGTCTAGC
CTCTCTGATCCACTTAGTACTGTTGCTCCAGGAGCTGAGAAGTCTCTTCAAAAGGGACAG
TCAAGTGCAGTGTTGTATTCACAGGAGGGAAATGGTTTTGAGCACATCATGACAGAGACA
AAGCTTGCTGCAGGTGATGCTTCAGACAATATACGTGGTGGTGATTTGCCTTCACAAGTG
AATGGGGGCAACACCAAGCTGAAAATAGAAGAGCACACTTCTGGTAACAAGAGGCAGAAG
CTAGAGGATGACACAGATATTTCTCAGCCTCAATCACAGTCACCGCCACCGCCACCCCCA
TTCCCTCATCCTGACGCATTCGAACCACCACCACCACCACCACCTGAGGTTCCTCCATCA
CCAGAGCCTAGCCCACCACCACCGCCAACTTCACCGCCACCCAATATGATCCCCCCGCCG
CCGCCGGCAATGCCACCCCAAATGATCTCACATGTACCACCTCCAGCTGGTACATTTGTA
CCTTTTCCTGCTGGACCACCTGGTCCAATGTATTCCAGCTACCCACCTTTTACTCCTGTG
GTCAACTTCCCCATAACCAGCCCACCAGCTGGTTTCCCTAGTCCAAGCCCGCCTCCGCCT
TTTCAAGGATTAGTGGGTACATTCTATGGCCCTCAGTTCCCCACCGCACCCCCACCAGCA
GACAGGAAATGA

Peptide Sequence

PEP ID

Zm00001d042291_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:159321899:159326381:1 gene:Zm00001d042291 transcript:Zm00001d042291_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENTH/VHS family protein
Sequence

MCTAVRAHRGCPRLSSPGIAGPLLVRIGAAPHDTSQFFFSMLQIDIWEDRKIFDTQAQSL
KDDFFRRLKDIRNKLKNTGSELLEKVVSSYKHVLNAPMDEDTLMRKCQAALINFDELNKT
YGNNSVLGSSNQSEFMQGVQEQHNILRNSIEQLKLSESLRATLISHLKEALNEQELKVEQ
VRSLLQAAQPRFKRAAELCVGLGSNMEMHEPSNQGHKRSSLSDPLSTVAPGAEKSLQKGQ
SSAVLYSQEGNGFEHIMTETKLAAGDASDNIRGGDLPSQVNGGNTKLKIEEHTSGNKRQK
LEDDTDISQPQSQSPPPPPPFPHPDAFEPPPPPPPEVPPSPEPSPPPPPTSPPPNMIPPP
PPAMPPQMISHVPPPAGTFVPFPAGPPGPMYSSYPPFTPVVNFPITSPPAGFPSPSPPPP
FQGLVGTFYGPQFPTAPPPADRK

Transcript Sequence

Transcript ID

Zm00001d042291_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:159321899:159326381:1 gene:Zm00001d042291 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENTH/VHS family protein
Sequence

CGCCCCGCCATCCAAGTTGTAGGAGGCCATCCAGACCTTCTCCATGATGCGCTGCTGATG
AAAGTATGATTCGCAGCGGTTGATGAAACCAAGGGGATCGGTCTTATCATCGTACTGGGG
AAAGTCCAGCTTCTGGAACCTTGGTGGCCGGTCATTATGGTGCTCGCCGGAGCCGATCTT
GATGCCGGGGGAGGACGTGCCGTCGACTGTGAGGTTGGCGATGGCCTGGGCATTGGCTGC
GACGGACTTCTGTAGCGACTTGAGGGCCTCAGCGTGGGCCTTGAAGTCGTTGGCACTACT
CATGGCTGGATCGCACGTTGCAACAGCGGCTGGGGTTGGTGATGAGGTGGCCGCAGGCTT
AGGGAGATAGGAGATTAGAGATAATACTTTTCTTATTCCTCATGTCTCACGGTTCCACTA
TAATTAGGCTACCTGCCTGACCAACTTGGCAACAACTAATTAGGCAATTACTTATTTGGT
AACCAATCCCCCTACCATTAAGGCCTATCAATTTAGACATCAATCTAGCCACTTTCCTTA
GTCGTGCCTTCCTTATGTGCACTGCTGTTCGCGCCCACCGTGGATGCCCGCGCCTCAGCT
CTCCTGGCATCGCGGGCCCGTTGTTGGTGCGCATAGGTGCGGCCCCACATGACACATCTC
AATTTTTTTTCTCAATGTTACAGATTGACATATGGGAAGACCGTAAAATATTTGATACTC
AGGCACAAAGCCTCAAAGATGACTTTTTCAGAAGGTTAAAGGACATTAGAAACAAATTGA
AAAATACGGGCAGTGAGCTGCTGGAGAAGGTTGTCTCTAGCTACAAACATGTCCTGAATG
CTCCTATGGATGAGGATACTCTGATGCGAAAATGCCAAGCAGCTCTTATCAATTTTGATG
AACTCAATAAAACGTATGGAAACAACTCTGTTTTAGGTAGCAGCAATCAATCGGAATTTA
TGCAGGGGGTGCAGGAACAACACAACATTCTCAGAAACTCCATTGAACAACTCAAATTGT
CAGAATCACTCAGGGCCACTCTGATTTCTCATTTGAAGGAAGCGCTGAATGAGCAGGAGC
TCAAAGTGGAACAAGTCAGAAGCCTGCTTCAGGCAGCTCAGCCTCGATTCAAGAGAGCTG
CTGAGCTCTGCGTGGGGCTTGGAAGCAACATGGAAATGCATGAGCCATCAAATCAAGGGC
ATAAGAGGTCTAGCCTCTCTGATCCACTTAGTACTGTTGCTCCAGGAGCTGAGAAGTCTC
TTCAAAAGGGACAGTCAAGTGCAGTGTTGTATTCACAGGAGGGAAATGGTTTTGAGCACA
TCATGACAGAGACAAAGCTTGCTGCAGGTGATGCTTCAGACAATATACGTGGTGGTGATT
TGCCTTCACAAGTGAATGGGGGCAACACCAAGCTGAAAATAGAAGAGCACACTTCTGGTA
ACAAGAGGCAGAAGCTAGAGGATGACACAGATATTTCTCAGCCTCAATCACAGTCACCGC
CACCGCCACCCCCATTCCCTCATCCTGACGCATTCGAACCACCACCACCACCACCACCTG
AGGTTCCTCCATCACCAGAGCCTAGCCCACCACCACCGCCAACTTCACCGCCACCCAATA
TGATCCCCCCGCCGCCGCCGGCAATGCCACCCCAAATGATCTCACATGTACCACCTCCAG
CTGGTACATTTGTACCTTTTCCTGCTGGACCACCTGGTCCAATGTATTCCAGCTACCCAC
CTTTTACTCCTGTGGTCAACTTCCCCATAACCAGCCCACCAGCTGGTTTCCCTAGTCCAA
GCCCGCCTCCGCCTTTTCAAGGATTAGTGGGTACATTCTATGGCCCTCAGTTCCCCACCG
CACCCCCACCAGCAGACAGGAAATGAGTGTAGTAACCTACCGGCAGCCCCCCTCATCATA
CTAGTTTATTTCCCCTTTTCAACAGAGAATATGACTCGGGGGGTGGGGGGGGGGGGGGGG
GCGCTCCATCAGCATGTGTTGTGGAGCTCAGAAGATTGTTGTAAATTTAGCCAGTCAGTG
CGCAGCAGTGAATTTTCTGAACTAGTTGTGGTCTTGGTCCTGGAGTAGAAGTGTAGAACC
TGTAGATTTCGACTGCTAGAGAGAATTAGGGATTCTGAGAGCCGAGAACAAATGCCTGCG
ACAGATTAATAATAAGTTGTGGTCTTGTTGGAGTAAAAACTGTAGATTCCCACAGCTTAG
AGAGAGAGCATGGAACTCGGTAGCATGACATGTTGTAACTCATGTACAATTGTGTTCATT
GCCAGATCATCCGAGAACATGTACATGTTCCCGTGATGTTTTGAGCGTGTAATTCTGTTG
TTCTGTGTAAGATATGGCTTGAGCCGCTGTCGATGGTTGAAACTTTTTGCTCTCGGTTAT
TGTATTGCCAGTAGTACCTTTTTGCG