Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042287_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:159074669:159084170:1 gene:Zm00001d042287 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:myb transcription factor2 description:CDC5 protein
Sequence	ATGAGGATCATGATCAAGGGAGGCGTGTGGAAGAACACGGAGGACGAGATCCTCAAGGCG GCCGTGATGAAGTACGGCAAGAACCAGTGGGCGCGCATCTCGTCGCTGCTCGTCCGCAAG TCCGCCAAGCAGTGCAAGGCCCGCTGGTATGAGTGGCTCGATCCGTCCATCAAGAAGACC GAGTGGACAAGGGAGGAGGATGAGAAATTACTTCATCTTGCTAAACTCATGCCTACTCAG TGGAGGACAATTGCACCTATTGTAGGTCGAACACCATCTCAGTGTCTTGAACGTTATGAA AAGCTGCTTGACGCCGCATGTGCAAAGGATGAAAATTATGAGGCTAATGATGATCCTAGG AAGCTGCGGCCTGGCGAGATTGACCCAAACCCTGAGTCAAAGCCCGCACGTCCTGATCCT GTTGATATGGATGAAGATGAAAAAGAAATGCTTTCTGAGGCTAGGGCCCGCTTAGCTAAC ACTAGGGGTAAAAAGGCCAAACGGAAGGCAAGGGAGAAACAACTTGAAGAAGCAAGAAGG CTTGCTTCACTACAAAAAAGGAGAGAATTGAAGGCAGCTGGTATTGATACACGCCACAGA AAAAGAAAGAGAAAGGGGATTGACTACAATGCTGAGATTCCATTTGAAAAGAGACCACCT TCAGGTTTTTATGATACTGTTGGTGAAGACAGACCACCTGAACATGTACAGTTTCCAACA ACCATTGAGGAGCTTGAAGGGAAGAGAAGAGCAGATATAGAGGCACAATTAAGAAAACAG GATATTGCCAGGAACAAGATCCTGCAGCGACAGGATGCCCCTGCTGCTATAATGCAAGCG AATAAACTAAATGATCCAGAAGCTGTCACAAAGAGGTCAAAGCTAATGCTGCCGCCTCCT CAAATTTCTGACCACGAGCTAGAGGAGATAGCAAAGATGGGCAGTGCTGGTGATCCTGCT TTAGCTGATGAGCTTGGTGAAGGAAGCACTGCCACAAGAACCTTGCTTGCCAGCTATTCT CAGACTCCAAGGCTTGGTATGACACCATTGCGAACTCCGCAGCGAACTCCAGCTGGGAAG GGTGATGCAATCATGATGGAGGCAGAAAATCTTGCACGTCTCAGAGAATCACAAACACCT CTATTAGGAGGTGATAACCCAGAGCTTCATCCATCAGATTTCTCTGGTGTTACACCACGC AAGAAGGAGATACAGACTCCAAATCCAATGGCAACACCTTTAGCAAGCCCTGGCCCTGGT ATTACTCCAAGGATTAGTATGACACCATCCAGAGAGGGGCACAGCTTTGGTTTAACACCG AAAGCAACTCCTCTTCGTGATGAACTTAACATAAATGAAGTGGAAATGCAGGACAACACT AAACTTGAGCTTCGTAGGCAAGCCGAACTGAGGAAAAGCCTGCGATCTGGTTTTGCTTCT ATTCCACAACCAAAGAATGAGTACCAGATAGTCATGCCACCTATTACGGAAGATGAGAAA GAAGAAGCTGAAGAGAAAATTGAAGAGGACATGTCAGACAGACTGGCACGAGAAAGGGCT GAGGAACAAGCTAGGCATGAGGCATTGCTCAGAAAGAGATCCAAAGTGTTGCAGAGGAGT CTGCCTAGGCCACCGGCTGTTTCAGTAGAGATTATCCGGCAATCTCTTATTAGAAGTGGA GAAAGCAGAAGCAGAAGCACCTTTATGCCTCCTACATCACTTGAACAAGCTGATGAACTA ATAAATGAGGAACTCCTTAGGCTTCTTGAGCATGATAATGCAAAATATCCTCTTGATGAA AAAACTCAAAAAGAGAAAAAGAAAGGAAGCAAGCGTCAGCAAAATGGAGGACCTCTTGTC CCTGAAATTGATGATTTTGATGAAGATGAACTAAAAGAGGCTAGCTCTATGGTTGAAGAG GAGATTCAATACCTTCGAGTGGCCATGGGTCATGAAAATGAATCTTTTGAGGACTTCGTG AAAGCACATGATGCATGCCAAGACGACCTTATGTTTTTTCCTACCAGCAATAGCTATGGT TTAGCTAGTGTGGCTGGAAATGCTGATAAGATTTCTGCTTTGCAAAATGAGTTTGAAACT GTGAAGAAGCGAATGGATGATGAAGCTAAGAAGGCTTCTCGGCTTGAGCAGAAGATTAAG CTTCTGACACAAGGATATCAGATACGGGCTGGAAAACTGTGGTCACAGGTCCAAGATACA TTCAAGCAGATGGACACTGCCGCAACAGAGCTCGAATGCTTCCAAGAGCTGCAGAAACAG GAACATCTCGCTGCTTCATATCGAATCCAAAATTTGTCTGAAGAAGTGAGTAAACAGAAG GCACTAGAAAGGACCCTCCAGAGCCGCTACGGCGAGCTGGTTTCTGGTTTCCAGAGGATC CAAGAACAGGTCGAGGAGCACAAGAGGCAACTCAAGGTACAAGAGGCGGTAGAAGCCGAA AGTCACGCTCAGGAAGAGGAAGCTGCGGCATCAAATCATGCTGCTGCTGAGGAAGAGGAT GAAAGGAAGGAAGATGATGAAAGGAAGGAAGAGGATGGAAGGAAGTCTCTCAGCTCTGAA GAGAAACCACAGCAGACAAGTACGGCTACCGATGAAGAACCTGCAGGAAGCAAAGGAACC ACCGAGGATCAGATGGACGTGGACAGCGGGAATGGAGAGGGTGGAGTTGTAGGCCCTGTC CCACCAGCACCAGACACTGAAGGGGGTAATGATGAAGTATCAGTTCAAGAGATCAGTGAA GCCCAGCCCTTGCCTTGA

Peptide Sequence

PEP ID	Zm00001d042287_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:159074669:159084170:1 gene:Zm00001d042287 transcript:Zm00001d042287_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:myb transcription factor2 description:CDC5 protein
Sequence	MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEANDDPR KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR LASLQKRRELKAAGIDTRHRKRKRKGIDYNAEIPFEKRPPSGFYDTVGEDRPPEHVQFPT TIEELEGKRRADIEAQLRKQDIARNKILQRQDAPAAIMQANKLNDPEAVTKRSKLMLPPP QISDHELEEIAKMGSAGDPALADELGEGSTATRTLLASYSQTPRLGMTPLRTPQRTPAGK GDAIMMEAENLARLRESQTPLLGGDNPELHPSDFSGVTPRKKEIQTPNPMATPLASPGPG ITPRISMTPSREGHSFGLTPKATPLRDELNINEVEMQDNTKLELRRQAELRKSLRSGFAS IPQPKNEYQIVMPPITEDEKEEAEEKIEEDMSDRLARERAEEQARHEALLRKRSKVLQRS LPRPPAVSVEIIRQSLIRSGESRSRSTFMPPTSLEQADELINEELLRLLEHDNAKYPLDE KTQKEKKKGSKRQQNGGPLVPEIDDFDEDELKEASSMVEEEIQYLRVAMGHENESFEDFV KAHDACQDDLMFFPTSNSYGLASVAGNADKISALQNEFETVKKRMDDEAKKASRLEQKIK LLTQGYQIRAGKLWSQVQDTFKQMDTAATELECFQELQKQEHLAASYRIQNLSEEVSKQK ALERTLQSRYGELVSGFQRIQEQVEEHKRQLKVQEAVEAESHAQEEEAAASNHAAAEEED ERKEDDERKEEDGRKSLSSEEKPQQTSTATDEEPAGSKGTTEDQMDVDSGNGEGGVVGPV PPAPDTEGGNDEVSVQEISEAQPLP

Transcript Sequence

Transcript ID	Zm00001d042287_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:159074669:159084170:1 gene:Zm00001d042287 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:myb transcription factor2 description:CDC5 protein
Sequence	AAGCAACAGAACCCAAACCTCGCCGATTCGCTCCCCTTCCTCACCGCGCGCGTACGCCGC CGCCGCGCTCACCTCACCGAACCCTAAACCTGAGCCACCGCCCTCCCCCGGAGGTCCGCC GCTCCGTGTGGGACTCTAGGCGTCGCCGGAGCCCCCTCCAGGGGCTAGCGGCGGAGGAAG TCGGAAACCGATTACCCCTCCCCTCCCCTTACCGGGGGAGGGAGAAACTAGCGGAGGAGG CGAATCAGGTCAGAGTGGGGCACGATGAGGATCATGATCAAGGGAGGCGTGTGGAAGAAC ACGGAGGACGAGATCCTCAAGGCGGCCGTGATGAAGTACGGCAAGAACCAGTGGGCGCGC ATCTCGTCGCTGCTCGTCCGCAAGTCCGCCAAGCAGTGCAAGGCCCGCTGGTATGAGTGG CTCGATCCGTCCATCAAGAAGACCGAGTGGACAAGGGAGGAGGATGAGAAATTACTTCAT CTTGCTAAACTCATGCCTACTCAGTGGAGGACAATTGCACCTATTGTAGGTCGAACACCA TCTCAGTGTCTTGAACGTTATGAAAAGCTGCTTGACGCCGCATGTGCAAAGGATGAAAAT TATGAGGCTAATGATGATCCTAGGAAGCTGCGGCCTGGCGAGATTGACCCAAACCCTGAG TCAAAGCCCGCACGTCCTGATCCTGTTGATATGGATGAAGATGAAAAAGAAATGCTTTCT GAGGCTAGGGCCCGCTTAGCTAACACTAGGGGTAAAAAGGCCAAACGGAAGGCAAGGGAG AAACAACTTGAAGAAGCAAGAAGGCTTGCTTCACTACAAAAAAGGAGAGAATTGAAGGCA GCTGGTATTGATACACGCCACAGAAAAAGAAAGAGAAAGGGGATTGACTACAATGCTGAG ATTCCATTTGAAAAGAGACCACCTTCAGGTTTTTATGATACTGTTGGTGAAGACAGACCA CCTGAACATGTACAGTTTCCAACAACCATTGAGGAGCTTGAAGGGAAGAGAAGAGCAGAT ATAGAGGCACAATTAAGAAAACAGGATATTGCCAGGAACAAGATCCTGCAGCGACAGGAT GCCCCTGCTGCTATAATGCAAGCGAATAAACTAAATGATCCAGAAGCTGTCACAAAGAGG TCAAAGCTAATGCTGCCGCCTCCTCAAATTTCTGACCACGAGCTAGAGGAGATAGCAAAG ATGGGCAGTGCTGGTGATCCTGCTTTAGCTGATGAGCTTGGTGAAGGAAGCACTGCCACA AGAACCTTGCTTGCCAGCTATTCTCAGACTCCAAGGCTTGGTATGACACCATTGCGAACT CCGCAGCGAACTCCAGCTGGGAAGGGTGATGCAATCATGATGGAGGCAGAAAATCTTGCA CGTCTCAGAGAATCACAAACACCTCTATTAGGAGGTGATAACCCAGAGCTTCATCCATCA GATTTCTCTGGTGTTACACCACGCAAGAAGGAGATACAGACTCCAAATCCAATGGCAACA CCTTTAGCAAGCCCTGGCCCTGGTATTACTCCAAGGATTAGTATGACACCATCCAGAGAG GGGCACAGCTTTGGTTTAACACCGAAAGCAACTCCTCTTCGTGATGAACTTAACATAAAT GAAGTGGAAATGCAGGACAACACTAAACTTGAGCTTCGTAGGCAAGCCGAACTGAGGAAA AGCCTGCGATCTGGTTTTGCTTCTATTCCACAACCAAAGAATGAGTACCAGATAGTCATG CCACCTATTACGGAAGATGAGAAAGAAGAAGCTGAAGAGAAAATTGAAGAGGACATGTCA GACAGACTGGCACGAGAAAGGGCTGAGGAACAAGCTAGGCATGAGGCATTGCTCAGAAAG AGATCCAAAGTGTTGCAGAGGAGTCTGCCTAGGCCACCGGCTGTTTCAGTAGAGATTATC CGGCAATCTCTTATTAGAAGTGGAGAAAGCAGAAGCAGAAGCACCTTTATGCCTCCTACA TCACTTGAACAAGCTGATGAACTAATAAATGAGGAACTCCTTAGGCTTCTTGAGCATGAT AATGCAAAATATCCTCTTGATGAAAAAACTCAAAAAGAGAAAAAGAAAGGAAGCAAGCGT CAGCAAAATGGAGGACCTCTTGTCCCTGAAATTGATGATTTTGATGAAGATGAACTAAAA GAGGCTAGCTCTATGGTTGAAGAGGAGATTCAATACCTTCGAGTGGCCATGGGTCATGAA AATGAATCTTTTGAGGACTTCGTGAAAGCACATGATGCATGCCAAGACGACCTTATGTTT TTTCCTACCAGCAATAGCTATGGTTTAGCTAGTGTGGCTGGAAATGCTGATAAGATTTCT GCTTTGCAAAATGAGTTTGAAACTGTGAAGAAGCGAATGGATGATGAAGCTAAGAAGGCT TCTCGGCTTGAGCAGAAGATTAAGCTTCTGACACAAGGATATCAGATACGGGCTGGAAAA CTGTGGTCACAGGTCCAAGATACATTCAAGCAGATGGACACTGCCGCAACAGAGCTCGAA TGCTTCCAAGAGCTGCAGAAACAGGAACATCTCGCTGCTTCATATCGAATCCAAAATTTG TCTGAAGAAGTGAGTAAACAGAAGGCACTAGAAAGGACCCTCCAGAGCCGCTACGGCGAG CTGGTTTCTGGTTTCCAGAGGATCCAAGAACAGGTCGAGGAGCACAAGAGGCAACTCAAG GTACAAGAGGCGGTAGAAGCCGAAAGTCACGCTCAGGAAGAGGAAGCTGCGGCATCAAAT CATGCTGCTGCTGAGGAAGAGGATGAAAGGAAGGAAGATGATGAAAGGAAGGAAGAGGAT GGAAGGAAGTCTCTCAGCTCTGAAGAGAAACCACAGCAGACAAGTACGGCTACCGATGAA GAACCTGCAGGAAGCAAAGGAACCACCGAGGATCAGATGGACGTGGACAGCGGGAATGGA GAGGGTGGAGTTGTAGGCCCTGTCCCACCAGCACCAGACACTGAAGGGGGTAATGATGAA GTATCAGTTCAAGAGATCAGTGAAGCCCAGCCCTTGCCTTGAAGACGGCGCTCCTTTCCC TTCAAGCTCCGCTTTCTTCTCCCGCACCTGGCGATCTTCACGATGTTGTTGTTGCACAGC AGGTCCGGACTGAGTATTTCCTATTTGGTTATATTTTTAGTGCACTATAATATCGCAAGC GAAGCTACAATTGGTTGTGAGCTAAATTTGCATATCCTTCCCTTTGTTGTATTCCCTTGA ACAATGAATCAGAACAACTGTTTACCATTTTTCTAAAGGATCGACGGCTTATGTACTCAT GCAGAACTGCCTCATTGTGCCTCTGGCTGAATAGCAGCCAAGTAAGCGTGACATGCTCTT TGTTCATTTAGTATGGTCCACAATGCTTTATGGAAACATTGGTGTACGAAATTTCTAACC AGCTGTTTTCCAATAAAAAGTCCACTTGT