Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042272_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:3:158434110:158447525:-1 gene:Zm00001d042272 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH4
Sequence	ATGGACGCCTCTCCCCTGAACCCGCCGCCGCTGGTGGAGGAGGAGCTTGTGCTGCGCCGC AGTGCTCGTTGCCTCAATAGGCCAACCCGGCCCAGCTACGCGGAACAGGAGCCTCCTAAA AAACCCGGCGGCCGGGGCCGGAGCAAGCGGAAGAGGGACGAGGAGAAACCGGAGCTGGCA CCGGCGCAGCAGGGTGCCAAGAGTCCGGACAGGAAGGACTCCAAGGATGAGGCGGGTGAG AAGAAGCCGACGCCCATGATTGCGGCGCTGCCGGTCTCTTGCGCTGGCGTTGCTGCTGAA GACGATGCGACGGGGACCGGGAAGAGCGCCAAGCTGAGGGTGAAGGAGACACTGAGGGCG TTCAATAGCCACTACCTCCACTTTGTGCAGGAGGAGCAGAAGAGAGCTCAGGCTGCGCTA CAGGAGATTAACGCTAAGAGTGGCCTCAAACGTCAGACCAAGGGGGGTGAAAAGAAACGC CCATCAAAGCGGCCTGACCTGAAAGCAATCACCAAGATGCAAGAAATGAATGCCGTGCTT TATCCAGAGAAAACGATTGGACATCTACCAGGGATCGATGTTGGAGATCATTTCTATTCT CGCGCTGAAATGGTAGTGTTGGGCATACACAGCCATTGGCTCAATGGCATTGACTTCATG GGGCTGAAATACCAAGGAAAGGAGTATTCAAACTTAACTTTCCCACTGGCCACCTGTATC GTAATGTCGGGGGTATATGAAGATGATCTAGACAAAGCTGATGAAATTATTTATACTGGT CAAGGAGGAAATGATTTGCTTGGTAACCATCGCCAAATTGGCTCTCAACAGTTGAAACGT GGGAATTTAGCGTTGAAGAATAGCAGGGAGAATGGTAATCCTGTCCGAGTTGTTCGAGGA CATTTGTCAAAGAATAGCTACACTGGAAAGATCTACACCTATGATGGGCTTTACAAGGTT GTAGATGACTGGGTGCAGAAGGGAGTGCAAGGCCATGTTGTTTTCAAATTTAAGTTGAAG CGGCTTGAGGGTCAGCCATCATTGACAACCTCTGAGGTGCGATTTACTCGTGCAGAAGCT CCGACAACTATTTCCGAATTACCCGGGCTGGTTTGTGATGACATCTCTGGAGGGCAAGAA AATATTCCTATTCCTGCTACTAACTTGGTTGATGATCCACCTGTTCCTCCATCTGGTTTC AAGTACTTGAAATCTCTACAAATTCCAAAGGACATCAAGATTCCGTCTAGTATTATTGGC TGTGATTGTGAAGGAGGTTGTGCTAGCAACAAAAAATGTTTGTGTGCTCAGCGCAATGGT TCTGATCTGCCTTATGTATCATATAAGAACATTGGCAGGTTGGTGGAGCCGAAAGCAGTT GTATTTGAATGTGGGGCTAACTGCAGCTGCAACCATGATTGTGTAAACAGAACATCTCAA CAAGGTTTGCAGTACCGCTTAGAGGTATTTAAGACAGCTTCAAAAGGATGGGGAGTCAGG ACTTGGGACACTATCCTCCCTGGGGCTCCCATCTGTGAGTACACAGGGGTGTTGAGGAGG ACCGAAGATTTGGATGGTTCACAGAACAACTATTGTTTTGACATTGACTGTCTTCAAACC ATGAAGGGTTTGGATGGAAGGGAGAAAAGGGCTGGATCCGAAATGCACCTGCCTAATCTT CATCCTGAGAATGATTCAGATGCACAACCTGCACCTGAGTACTGCATAGACGCTCACTCT ATTGGCAACTTTGCAAGATTTATAAATCACAGCTGCCAACCTAACCTTTTCGTCCAGTGC GTCTTGAGCTCACACAATGATGTTAAACTGGCGAAAGTGATGCTTTTCGCTGCTGACACC ATACTTCCTCTTCAGGAGCTATCCTATGACTACGGTTATCGATTGGACAGTGTTGTTGGG CCTGATGGAAAAATTGTGAAGCTGGCCTGCCACTGTGGTGCTCCTGATTGCCGGAAGCGC CTCTACTAA

Peptide Sequence

PEP ID	Zm00001d042272_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:3:158434110:158447525:-1 gene:Zm00001d042272 transcript:Zm00001d042272_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH4
Sequence	MDASPLNPPPLVEEELVLRRSARCLNRPTRPSYAEQEPPKKPGGRGRSKRKRDEEKPELA PAQQGAKSPDRKDSKDEAGEKKPTPMIAALPVSCAGVAAEDDATGTGKSAKLRVKETLRA FNSHYLHFVQEEQKRAQAALQEINAKSGLKRQTKGGEKKRPSKRPDLKAITKMQEMNAVL YPEKTIGHLPGIDVGDHFYSRAEMVVLGIHSHWLNGIDFMGLKYQGKEYSNLTFPLATCI VMSGVYEDDLDKADEIIYTGQGGNDLLGNHRQIGSQQLKRGNLALKNSRENGNPVRVVRG HLSKNSYTGKIYTYDGLYKVVDDWVQKGVQGHVVFKFKLKRLEGQPSLTTSEVRFTRAEA PTTISELPGLVCDDISGGQENIPIPATNLVDDPPVPPSGFKYLKSLQIPKDIKIPSSIIG CDCEGGCASNKKCLCAQRNGSDLPYVSYKNIGRLVEPKAVVFECGANCSCNHDCVNRTSQ QGLQYRLEVFKTASKGWGVRTWDTILPGAPICEYTGVLRRTEDLDGSQNNYCFDIDCLQT MKGLDGREKRAGSEMHLPNLHPENDSDAQPAPEYCIDAHSIGNFARFINHSCQPNLFVQC VLSSHNDVKLAKVMLFAADTILPLQELSYDYGYRLDSVVGPDGKIVKLACHCGAPDCRKR LY

Transcript Sequence

Transcript ID	Zm00001d042272_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:158434110:158447525:-1 gene:Zm00001d042272 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH4
Sequence	GCTGCGCTCGTTTGCAAGTGGGGGTTTTTCGGTTCATCTGGTTCTAACTTTGCTTTGTTG GGGTTTTGTTGGTGAAGCTGGTGGACGCCGAAGGTGAATTCGGTGGCGCCGGTGCCGAAC CCGATATTCATGGACGCCTCTCCCCTGAACCCGCCGCCGCTGGTGGAGGAGGAGCTTGTG CTGCGCCGCAGTGCTCGTTGCCTCAATAGGCCAACCCGGCCCAGCTACGCGGAACAGGAG CCTCCTAAAAAACCCGGCGGCCGGGGCCGGAGCAAGCGGAAGAGGGACGAGGAGAAACCG GAGCTGGCACCGGCGCAGCAGGGTGCCAAGAGTCCGGACAGGAAGGACTCCAAGGATGAG GCGGGTGAGAAGAAGCCGACGCCCATGATTGCGGCGCTGCCGGTCTCTTGCGCTGGCGTT GCTGCTGAAGACGATGCGACGGGGACCGGGAAGAGCGCCAAGCTGAGGGTGAAGGAGACA CTGAGGGCGTTCAATAGCCACTACCTCCACTTTGTGCAGGAGGAGCAGAAGAGAGCTCAG GCTGCGCTACAGGAGATTAACGCTAAGAGTGGCCTCAAACGTCAGACCAAGGGGGGTGAA AAGAAACGCCCATCAAAGCGGCCTGACCTGAAAGCAATCACCAAGATGCAAGAAATGAAT GCCGTGCTTTATCCAGAGAAAACGATTGGACATCTACCAGGGATCGATGTTGGAGATCAT TTCTATTCTCGCGCTGAAATGGTAGTGTTGGGCATACACAGCCATTGGCTCAATGGCATT GACTTCATGGGGCTGAAATACCAAGGAAAGGAGTATTCAAACTTAACTTTCCCACTGGCC ACCTGTATCGTAATGTCGGGGGTATATGAAGATGATCTAGACAAAGCTGATGAAATTATT TATACTGGTCAAGGAGGAAATGATTTGCTTGGTAACCATCGCCAAATTGGCTCTCAACAG TTGAAACGTGGGAATTTAGCGTTGAAGAATAGCAGGGAGAATGGTAATCCTGTCCGAGTT GTTCGAGGACATTTGTCAAAGAATAGCTACACTGGAAAGATCTACACCTATGATGGGCTT TACAAGGTTGTAGATGACTGGGTGCAGAAGGGAGTGCAAGGCCATGTTGTTTTCAAATTT AAGTTGAAGCGGCTTGAGGGTCAGCCATCATTGACAACCTCTGAGGTGCGATTTACTCGT GCAGAAGCTCCGACAACTATTTCCGAATTACCCGGGCTGGTTTGTGATGACATCTCTGGA GGGCAAGAAAATATTCCTATTCCTGCTACTAACTTGGTTGATGATCCACCTGTTCCTCCA TCTGGTTTCAAGTACTTGAAATCTCTACAAATTCCAAAGGACATCAAGATTCCGTCTAGT ATTATTGGCTGTGATTGTGAAGGAGGTTGTGCTAGCAACAAAAAATGTTTGTGTGCTCAG CGCAATGGTTCTGATCTGCCTTATGTATCATATAAGAACATTGGCAGGTTGGTGGAGCCG AAAGCAGTTGTATTTGAATGTGGGGCTAACTGCAGCTGCAACCATGATTGTGTAAACAGA ACATCTCAACAAGGTTTGCAGTACCGCTTAGAGGTATTTAAGACAGCTTCAAAAGGATGG GGAGTCAGGACTTGGGACACTATCCTCCCTGGGGCTCCCATCTGTGAGTACACAGGGGTG TTGAGGAGGACCGAAGATTTGGATGGTTCACAGAACAACTATTGTTTTGACATTGACTGT CTTCAAACCATGAAGGGTTTGGATGGAAGGGAGAAAAGGGCTGGATCCGAAATGCACCTG CCTAATCTTCATCCTGAGAATGATTCAGATGCACAACCTGCACCTGAGTACTGCATAGAC GCTCACTCTATTGGCAACTTTGCAAGATTTATAAATCACAGCTGCCAACCTAACCTTTTC GTCCAGTGCGTCTTGAGCTCACACAATGATGTTAAACTGGCGAAAGTGATGCTTTTCGCT GCTGACACCATACTTCCTCTTCAGGAGCTATCCTATGACTACGGTTATCGATTGGACAGT GTTGTTGGGCCTGATGGAAAAATTGTGAAGCTGGCCTGCCACTGTGGTGCTCCTGATTGC CGGAAGCGCCTCTACTAACCTGCAGTGTGTTTATTTCTATTTGGATTTTTGAGGAAACAG CTTATATTGTAGGAAAAACAGTCATGGTACCTATGTAGTTGACATGCTCTTGATCATATA TAGCAAAAGAGGAGCAATTTATGGGGTGTTCGGT