Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042264_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:3:158018631:158023145:1 gene:Zm00001d042264 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartokinase 1 chloroplastic
Sequence

ATGGCAATCCCAGTGCGATCGGCTGCCGCGCCCCGCCGCCTCGTTCCGTCGATACCTCCG
GCGAGCTCTGGACATGTTCGAGGACTGGCGTGCTTCGGTACCCGAACCGGGCCTCGCGGT
GCAAGAGGGTTGTCAATGGTGGTCGCCGACTCCACCAGCCGTCGGGCCAAGCAAGCGGAC
GGCGGGGACGGCGTCCTTGGGGCGCCTGTTCTCGGAGGGCTCGGGATGGAGGGATTGGGG
GATCAGCTCAGCGTGGTGATGAAGTTCGGGGGGTCCTCGGTGTCGTCGGCCGCGAGGATG
GCTGAGGTGGCCGGCCTCATCCTGACGTTCCCCGAGGAGCGCCCCGTCGTCGTTCTCTCT
GCCATGGGGAAAACCACCAACAACCTTCTCCTTGCTGGAGAGAAGGCAGTAGGGTGTGGA
GTTATCCATGTTTCTGAAATCGAAGAGTGGAATATGGTCAAAAGCCTACATATCAAGACG
GTGGATGAACTTGGACTTCCAAGATCTGTAATACAAGACATGCTAGATGAACTGGAGCAA
CTATTGAAAGGTATCGCTATGATGAAAGAGCTGACGCCTAGGACCAGTGACTACCTTGTT
TCATTTGGAGAATGCATGTCCACCAGGATTTTTTCTGCTTATTTGAACAAAATTCGTGTC
AAGGCACGGCAGGTACTTCTTGATATTTTCTTGATTTGCACAGTGATTCAGTGA

Peptide Sequence

PEP ID

Zm00001d042264_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:3:158018631:158023145:1 gene:Zm00001d042264 transcript:Zm00001d042264_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartokinase 1 chloroplastic
Sequence

MAIPVRSAAAPRRLVPSIPPASSGHVRGLACFGTRTGPRGARGLSMVVADSTSRRAKQAD
GGDGVLGAPVLGGLGMEGLGDQLSVVMKFGGSSVSSAARMAEVAGLILTFPEERPVVVLS
AMGKTTNNLLLAGEKAVGCGVIHVSEIEEWNMVKSLHIKTVDELGLPRSVIQDMLDELEQ
LLKGIAMMKELTPRTSDYLVSFGECMSTRIFSAYLNKIRVKARQVLLDIFLICTVIQ

Transcript Sequence

Transcript ID

Zm00001d042264_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:158018631:158023145:1 gene:Zm00001d042264 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartokinase 1 chloroplastic
Sequence

AGAAATGGCAATCCCAGTGCGATCGGCTGCCGCGCCCCGCCGCCTCGTTCCGTCGATACC
TCCGGCGAGCTCTGGACATGTTCGAGGACTGGCGTGCTTCGGTACCCGAACCGGGCCTCG
CGGTGCAAGAGGGTTGTCAATGGTGGTCGCCGACTCCACCAGCCGTCGGGCCAAGCAAGC
GGACGGCGGGGACGGCGTCCTTGGGGCGCCTGTTCTCGGAGGGCTCGGGATGGAGGGATT
GGGGGATCAGCTCAGCGTGGTGATGAAGTTCGGGGGGTCCTCGGTGTCGTCGGCCGCGAG
GATGGCTGAGGTGGCCGGCCTCATCCTGACGTTCCCCGAGGAGCGCCCCGTCGTCGTTCT
CTCTGCCATGGGGAAAACCACCAACAACCTTCTCCTTGCTGGAGAGAAGGCAGTAGGGTG
TGGAGTTATCCATGTTTCTGAAATCGAAGAGTGGAATATGGTCAAAAGCCTACATATCAA
GACGGTGGATGAACTTGGACTTCCAAGATCTGTAATACAAGACATGCTAGATGAACTGGA
GCAACTATTGAAAGGTATCGCTATGATGAAAGAGCTGACGCCTAGGACCAGTGACTACCT
TGTTTCATTTGGAGAATGCATGTCCACCAGGATTTTTTCTGCTTATTTGAACAAAATTCG
TGTCAAGGCACGGCAGGTACTTCTTGATATTTTCTTGATTTGCACAGTGATTCAGTGAGC
TTTTCAGGTTATGAATGCAGCAGCCTACAAGAATTTGCTATAGTATCCCTGCCCTATGGT
GGGGGTGTCTTGAAACTTTGATTAGTCATTGATATTTTTACTACATATGCACTTCGTGAT
CTCAAGTTTCAGCTCATTATGTTAGTTGATTGCCACTAGTATTCTGCGGAAATTTCACAT
TTCGATAATGATTCGTTCATTGTCCTTTTATGTGTGCGTGGAAAATATTCTTAGTATTTT
TTAGATTTTGTGATTAATTTGGTATTGCCATAAAATTGTAACCTTTTAGATGATGGAGAT
AATCTCCGTCCACTTCACCAACCAGGTTACACAAACCATTTTATCCTTTAAAATGTGGAC
AACAGGATTTGAACCCTTATAGTAGTGGAGTCACACACCCACAACTCAATTGAGTGTTTG
ACTATGATCTGGATTTCCCTTTATTTAATATCTCAATTTGATACAGGGGCCATGTAACCA
GCCTAGCTGCAAATCCCCAGTACATCCATATACATCCCCCATTCTTCTACATTATGCAAT
GATGTGAACTCACGTTCATTATTAATTTTATTTGAAATTTTTTGCAGTATGACGCATTTG
ATATTGGTTTCATTACAACTGATGAATTTGGTAATGCGGATATCTTAGAAGCAACCTATC
CTGCTGTTGCGAAGAGACTTCATGGGGACTGGATACAGGATCCAGCGATACCTGTTGTTA
CTGGGTTCCTTGGGAAGGGCTGGAAATCTGGTGCTGTAACTACTTTAGGCCGAGGTGGTA
GTGACTTGACTGCTACAACCATTGGTAAAGCCTTGGGACTGAGAGAAATTCAGGTATGGA
AAGATGTTGATGGTGTACTTACTTGTGATCCAAATATCTACCCACATGCAAAGACTGTTC
CATACTTAACATTTGAAGAGGCCACAGAACTTGCTTATTTTGGTGCTCAGGTACTCTTTC
TTTTGAGTGAAGAATCAAAAGTAACATTTCCCCCAAGAAAAATTATTTGTCTTGGACTGT
TAAAGGGGCTATGATGGTTGACATGCGATGATTCATTTTTGTCACTAATGAATCTTTGTA
CAAATTATATTTTGAATGCTCAAGAAAAAAGTTCTGGAACTAAACAACAATGATATCGGG
TACATGATATTTCATCTTTATTGCACGTTTTCAGGACTTGAACCCTGTATAGTGTGACCA
GGCTGCTTCTCAGTGAATAAACAAATCTTTCAGTTGCATACTTCTCAAAAACGAAAGATC
CTGTTCAGTAGATAAACCTCTGTTCCCTTTTTACCTTTTAAAGCTATATTGATTGTTGTT
TGGCATTTGCTTTACTAACCATCATGAATTGAACATATAGCTCATGATGTCAGTCTCCTG
AACAGAAGCGAGAAATTTAGGATCGTTATTGTGGACTGTTCACTCCAATGCAGGTTTTGC
ATCCACAATCGATGAGACCTGCTAGAGAAGGTGATATTCCAGTTAGGGTTAAGAATTCAT
ACAACCCTAAAGCTCCAGGCACCCTTATTACCAGACAAAGAGACATGGATAAGGTCTGGT
AGTAGGTAACTTCAAATATATCCTCACATCTGCTTGACTTTCGAGGCATTGATTTTTGCG
CCCCTCTTTTTCACTACTAGGTTGTACTAACTAGCATAGTGCTCAAGTCAAATGTCACTA
TGTTGGACATTGTGAGCACTCGGATGCTTGGTCAGTATGGTTTTCTGGCAAGGGTATGTT
GAACACTGAGCCATTTTTGTATTTATATTACACTGTTCTGATCACTGCATGTATGACCTT
GAGCAGGTATTTGCTATATTTGAAGATCTATGTATATCTGTGGATTGTGTTGCTACCAGT
GAAGTTAGTGTTTCTGTGTCACTTGATCCATCAAAGATCTGGAGTAGGGAACTGATACAG
CAGGCAAGTGTTTCCATTCCTTCATTGTATTAGCATGTAGAAGCACATGAAAAATTGTTT
TTGGTGACTTGATAGTGCATTTCCAAGAGAAATATTTTTATTCCAATTCTCTACGCTTCC
ACATTGTTAACAAATTTTCAGGAACTTGACAATGTAGTTGAAGAGCTAGCAAGTAGAAAC
ACGAGATATTTTTTTTTTTGCAAGTGACTTATCCCATGCCTGAACATTTTAGTTCTCTGT
GCTTCACAATTGTTAACAATCTTTCAGGAACTTGACCATGTAGTTGAAGAGCTTGAGAAA
ATAGCAATTGTTCGTCTACTTCAGCAGAGGGCGATAATTTCACTTATCGGAAATGTGGAG
CAATCGTCTCTCATACTAGAAAAGACGGGACGTGTGCTGAGGAAAAGTGGGGTTAATGTT
CAGATGATCTCGCAAGGAGCGTCAAAGGTTAACATGTCGCTGATAGTCCATGATAGCGAT
GCAAAGGCACTCGTAGAAGCCCTTCATCAGGCGTTCTTTGAAGACGATGTCCTATCACAA
GTCGAAGCGGAGAACCTACTCGTGGGCTGATCAACGTAGGCTTTGCTGGGTCCAGGCGTG
TTATCTGTTATAGATTCCCACTCGCCTCCATGAACGGCATGGGCATTGGATCATTGATCA
TGTTTTGCTTGAAACAAGTATGTCTTCCAGGTTCTCAGCCAATGACTGCAAAACTGTGTT
TCTGTTTTAGAACTGTTT