Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042260_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:157879476:157881240:-1 gene:Zm00001d042260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloroplastic quinone-oxidoreductase

Sequence

ATGGCCGCACCTTCCGGCACGATGCGCGCCGTGCAGTACGACAGATACGGCGGAGGAGCA
CGGGGGCTCAAGCATGTGGAGGTGCCGATCCCGTCGCCGAAGAAAGGCGAGGTGCTCATC
AGGATGGAGGCCACCAGCATCAACGTCGTCGACTGGAAGTTCCAGAACGGCTTCGCGCGG
CCCTTCATGCCCAGGAGGTTCCCTTTCATCTCTGGTTTCGACCTAGCAGGAGAGGTCGTA
GAGTTGGGTGCTGGAGTGAGCAGCTTCAAACCAGGGGATAAGGTGATCGCCATCAACTTC
CCGAACGGCGGAGGGCTCGCCGAGTACGCGGTCGCGTCAGCGTCTCGTACAGCCGCAAGG
CCGCCGGAGGTGTCGGCCGTCGAAGGTGTCTGCGTGCCGATCGCCGCAGTCACCGCGCTC
GGGTCGCTGCGGACAGCCGGGGTCACAGTCACACTGGACGACCCGGCTCGCGCCCCCGCC
ACGCCCAAGAACGTGCTGGTCACCGCGGCCTCCGGCGCCGTCGGCCACTTCGCCGTGCAG
CTCGCCAGGATGGGCGGCCACAACGTCACGGCCACCTGCGGCGCGCGCAACCTCGGCCTG
GTCCGGAGCCTCGGCGCCGACGAGGCGCTGGACTACAAGACCCCCGAGGGCGCCAAGCTG
CGGAGCCCCTCCGGCAGGAAGTACGACGCGGTGGTGCACTGCGCCGCGAAGGGGCTCCCG
TGGTCCGTGTTCAGGCCCGTGCTCGCCGCCTCGGGCACGGTCGTCGACATCACGCCAGGG
TTCGTGGCCGTCGTCACCGCGATCCTCCAGGTGGCGACCTTCTCCAAGAAGAGGCTGGTG
CCGCTCATAGTGACGCCCAAGAAGGAGGAGATGGAGCTGCTGCTGGGCATGCTGAAGCAG
GGTAGGCTCAAGACGGTCATAGATTCCCGGCACCCGCTGGGCAGCGCTCACGAAGGCTGG
GCCAAGAGCATGAGCGGCCACGCCACCGGCAAGGTCGTCATAGAGATCGGAGCCGCGCAA
CCATAA

Peptide Sequence

PEP ID

Zm00001d042260_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:157879476:157881240:-1 gene:Zm00001d042260 transcript:Zm00001d042260_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloroplastic quinone-oxidoreductase

Sequence

MAAPSGTMRAVQYDRYGGGARGLKHVEVPIPSPKKGEVLIRMEATSINVVDWKFQNGFAR
PFMPRRFPFISGFDLAGEVVELGAGVSSFKPGDKVIAINFPNGGGLAEYAVASASRTAAR
PPEVSAVEGVCVPIAAVTALGSLRTAGVTVTLDDPARAPATPKNVLVTAASGAVGHFAVQ
LARMGGHNVTATCGARNLGLVRSLGADEALDYKTPEGAKLRSPSGRKYDAVVHCAAKGLP
WSVFRPVLAASGTVVDITPGFVAVVTAILQVATFSKKRLVPLIVTPKKEEMELLLGMLKQ
GRLKTVIDSRHPLGSAHEGWAKSMSGHATGKVVIEIGAAQP

Transcript Sequence

Transcript ID

Zm00001d042260_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:157879476:157881240:-1 gene:Zm00001d042260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloroplastic quinone-oxidoreductase

Sequence

GATTCATCAATGCTAGTTCTATTAGCTACTACTAGGCGTTGGGCACTGTACTGTACTGCT
GCCTCCAATTATTACTAGAGTACTCCCGGTGCCATCTCCTCCATCTCCCTATTCCTCAGC
TCCTGGACCGGCCATGGCCGCACCTTCCGGCACGATGCGCGCCGTGCAGTACGACAGATA
CGGCGGAGGAGCACGGGGGCTCAAGCATGTGGAGGTGCCGATCCCGTCGCCGAAGAAAGG
CGAGGTGCTCATCAGGATGGAGGCCACCAGCATCAACGTCGTCGACTGGAAGTTCCAGAA
CGGCTTCGCGCGGCCCTTCATGCCCAGGAGGTTCCCTTTCATCTCTGGTTTCGACCTAGC
AGGAGAGGTCGTAGAGTTGGGTGCTGGAGTGAGCAGCTTCAAACCAGGGGATAAGGTGAT
CGCCATCAACTTCCCGAACGGCGGAGGGCTCGCCGAGTACGCGGTCGCGTCAGCGTCTCG
TACAGCCGCAAGGCCGCCGGAGGTGTCGGCCGTCGAAGGTGTCTGCGTGCCGATCGCCGC
AGTCACCGCGCTCGGGTCGCTGCGGACAGCCGGGGTCACAGTCACACTGGACGACCCGGC
TCGCGCCCCCGCCACGCCCAAGAACGTGCTGGTCACCGCGGCCTCCGGCGCCGTCGGCCA
CTTCGCCGTGCAGCTCGCCAGGATGGGCGGCCACAACGTCACGGCCACCTGCGGCGCGCG
CAACCTCGGCCTGGTCCGGAGCCTCGGCGCCGACGAGGCGCTGGACTACAAGACCCCCGA
GGGCGCCAAGCTGCGGAGCCCCTCCGGCAGGAAGTACGACGCGGTGGTGCACTGCGCCGC
GAAGGGGCTCCCGTGGTCCGTGTTCAGGCCCGTGCTCGCCGCCTCGGGCACGGTCGTCGA
CATCACGCCAGGGTTCGTGGCCGTCGTCACCGCGATCCTCCAGGTGGCGACCTTCTCCAA
GAAGAGGCTGGTGCCGCTCATAGTGACGCCCAAGAAGGAGGAGATGGAGCTGCTGCTGGG
CATGCTGAAGCAGGGTAGGCTCAAGACGGTCATAGATTCCCGGCACCCGCTGGGCAGCGC
TCACGAAGGCTGGGCCAAGAGCATGAGCGGCCACGCCACCGGCAAGGTCGTCATAGAGAT
CGGAGCCGCGCAACCATAATAATAGTGCAGCAATATATTGATTCAAAAAATAATTATGAA
TTTTGTAATTTTTAGATCTATAATTTCTATATTTTTTTGTTCATGAATTATGTATTTTTA
TTTAAAATTTATGAATCATGTATTTTTATTTTTATATGAATTATGTATTTTTACTAGATG
AATGCACGTGCGTTGCAACGGGAATATATAATA