Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042180_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:3:155197997:155203597:1 gene:Zm00001d042180 gene_biotype:protein_coding transcript_biotype:protein_coding description:VAP27-2
Sequence	ATGGGGCAGGACCTCGTCGAGATCCACCCGCGCGAGCTCCAGTTCACATTTGAGGTGAAG AAACAAAGTTCATGTGTTGTCTGCCTAACCAACAAGTCCAACGAATATGTTGCTTTTAAG GTTAAAACGACATCCCCTAAAAGATACTGTGTTCGACCAAATACCGGGGTTATCCTTCCG AGGAAAACATGTGAATTCACAGTTACCATGCAAGCGCTCCGGACTGCTCCACCAGACATG CAATTAAAGGACAAGTTTTTAGTACAGACCACAGTTGTTCCTTATGGCACATCTGATGAA GAACTCGTTCCTGCCGTTTTCTCCAAAGAAACTGGCAGATACATCGAGGAAAGCAAATTG AGAGTTGTTCTTGTTAGTTCATACCAATCCCTCGAAGAGCAACCCACTAATGGAATTCAT GACACTGAGCCAGCTGTTGAAGTTCCTTTACTGAAAGAGATGCCAAATTTAGGGAGCGAA GTACCAGATGTTGCAAAAGAAATTCCTGCCCCTCTGGTACAAGGTCCAGCAATTGTGACC GGAATACCTTCACCTGTCAAAGAGGTTCCAGGCCTGAGAGAAATTCCTGTGCCACTGAAC GAAGCACCAACTTTATTGGCAGAATTTCCTTCCCCTCAAAAAGATCCCTCTGCTATTACA GTTGAACATGCCTCTAATGTTACAATTGAGCATGCCCCTGCTATTTCCATTGAATCCCCA CCTTTGAAACAAAGTGTTCCAGTTTTTAAGGAATCTCCTCTGAAACAAAGCGTTGCAGTT TTTAAGGAATCTCCTCCTTTGAAACAAAGCATTTCAGTTTTTAAGGAATCTCCTCCACTG GAGGAAACTACTCCTAAAGAAGCTGTTATGCTAAGTGACCGAGGGCTTTTCAATGTGCAG AATCATCAATTATCCCATCAATGTGTTGACTTTCTCCTTATACATATGTACCAGGTAACA GAAGATGTTCAGAATATGAAATCAAAGCTCAACAATCTTGAATCAAAATTGGAAGAGGCT GAAAAGATGATAATAAGGCTAAGAGAAGAGAGCAGAAATACCACCCAGGAGCGGGATGAG CTACAGCAAGAAATGGTATTCCTAAGAAAGAAGGGAACCGCAAGGAGTCAAATGGGTTTC CCCCTGCTCTTTGTGGTGTACGTGGCGCTTCTTGGTACCTGTATCGGTTACCTGCTCCGC ATATGA

Peptide Sequence

PEP ID	Zm00001d042180_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:3:155197997:155203597:1 gene:Zm00001d042180 transcript:Zm00001d042180_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:VAP27-2
Sequence	MGQDLVEIHPRELQFTFEVKKQSSCVVCLTNKSNEYVAFKVKTTSPKRYCVRPNTGVILP RKTCEFTVTMQALRTAPPDMQLKDKFLVQTTVVPYGTSDEELVPAVFSKETGRYIEESKL RVVLVSSYQSLEEQPTNGIHDTEPAVEVPLLKEMPNLGSEVPDVAKEIPAPLVQGPAIVT GIPSPVKEVPGLREIPVPLNEAPTLLAEFPSPQKDPSAITVEHASNVTIEHAPAISIESP PLKQSVPVFKESPLKQSVAVFKESPPLKQSISVFKESPPLEETTPKEAVMLSDRGLFNVQ NHQLSHQCVDFLLIHMYQVTEDVQNMKSKLNNLESKLEEAEKMIIRLREESRNTTQERDE LQQEMVFLRKKGTARSQMGFPLLFVVYVALLGTCIGYLLRI

Transcript Sequence

Transcript ID	Zm00001d042180_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:155197997:155203597:1 gene:Zm00001d042180 gene_biotype:protein_coding transcript_biotype:protein_coding description:VAP27-2
Sequence	GCCCTTTCCTTCTTCCCTCCCGTCGTCTTCACTCCGACGCCTCCCCTGCCGCTACCGCTA TTGCCTATTGGGAGGGCGGTCCCTGTCGCGCGCGACGCCGAGGCTTCGTGACGGGGACAC GCTGCTAATTTGTAGCGCACCACACGCCGGCTCGGCCTCGGTTGCGCCTCGCCTCGCATC GCCAGGGGATTACTGGCGGGCAGCGCTCGTGCTTGTTGTGCAGCCGGTGCGTCTGCTCGT GGCCTGCGGCGATGGGGCAGGACCTCGTCGAGATCCACCCGCGCGAGCTCCAGTTCACAT TTGAGGTGAAGAAACAAAGTTCATGTGTTGTCTGCCTAACCAACAAGTCCAACGAATATG TTGCTTTTAAGGTTAAAACGACATCCCCTAAAAGATACTGTGTTCGACCAAATACCGGGG TTATCCTTCCGAGGAAAACATGTGAATTCACAGTTACCATGCAAGCGCTCCGGACTGCTC CACCAGACATGCAATTAAAGGACAAGTTTTTAGTACAGACCACAGTTGTTCCTTATGGCA CATCTGATGAAGAACTCGTTCCTGCCGTTTTCTCCAAAGAAACTGGCAGATACATCGAGG AAAGCAAATTGAGAGTTGTTCTTGTTAGTTCATACCAATCCCTCGAAGAGCAACCCACTA ATGGAATTCATGACACTGAGCCAGCTGTTGAAGTTCCTTTACTGAAAGAGATGCCAAATT TAGGGAGCGAAGTACCAGATGTTGCAAAAGAAATTCCTGCCCCTCTGGTACAAGGTCCAG CAATTGTGACCGGAATACCTTCACCTGTCAAAGAGGTTCCAGGCCTGAGAGAAATTCCTG TGCCACTGAACGAAGCACCAACTTTATTGGCAGAATTTCCTTCCCCTCAAAAAGATCCCT CTGCTATTACAGTTGAACATGCCTCTAATGTTACAATTGAGCATGCCCCTGCTATTTCCA TTGAATCCCCACCTTTGAAACAAAGTGTTCCAGTTTTTAAGGAATCTCCTCTGAAACAAA GCGTTGCAGTTTTTAAGGAATCTCCTCCTTTGAAACAAAGCATTTCAGTTTTTAAGGAAT CTCCTCCACTGGAGGAAACTACTCCTAAAGAAGCTGTTATGCTAAGTGACCGAGGGCTTT TCAATGTGCAGAATCATCAATTATCCCATCAATGTGTTGACTTTCTCCTTATACATATGT ACCAGGTAACAGAAGATGTTCAGAATATGAAATCAAAGCTCAACAATCTTGAATCAAAAT TGGAAGAGGCTGAAAAGATGATAATAAGGCTAAGAGAAGAGAGCAGAAATACCACCCAGG AGCGGGATGAGCTACAGCAAGAAATGGTATTCCTAAGAAAGAAGGGAACCGCAAGGAGTC AAATGGGTTTCCCCCTGCTCTTTGTGGTGTACGTGGCGCTTCTTGGTACCTGTATCGGTT ACCTGCTCCGCATATGAGTTCCAAACTTCAAAAAAGTTCAGCAGATGGGATATGCTTCGT ATGTGGGCAAGACAATTGAACGGCAGTTGCACTCCAAAATGTTGAGGGGTGAATTTATTA GCATTATTAGTTCGGAACTTCATATGGTTTTGCACATAACAGCAGTGCCAAACTACCATC TGCCTGTATGTATAGAACAGTTACTTTTTTTCGCGTTTTATAGAACCCACCCAAAAGATG TCTGCTGCCTCGTAGACTAACCTGGGATTCTTCTTCCATCTACCTAAGATTTTTTTTTAC ACTTTACTGGATTCGCTTGCCCTGAATCGGTATTGGTCTTTTGTGTAACTATTTTT