Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042168_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:154685639:154690340:1 gene:Zm00001d042168 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (C3HC4-type RING finger) family protein
Sequence	ATGGGGAAGGACGCCGGCGAGGCGCAGCAGCAGCCGGACGGGGCGGGCGGTGGCGCAGGC GGCGGCGCAGGAGGAAATAGGGGCGGCCGCTTCTGCTTCTGCGGCGGCGGAGGAGCGGCG AGGGTGGTTCGGCTGCAATGCGTGGCAGCGCTCGTGCTCGGGGTGGCCGTGCTGCTGTCG GCGCTCTTCTGGCTCCCGCCCTTTGCCGGGTGGGGCGGCGGCAAGGAGGGCCCGGATCCG GGCGACGAGTTCGGAGCTGCTATAGCGGCAAGCTTTAGGCTACACAAGACAGTTCCTGAG CTGAGTGGAAATAAATCCCAGCTCGAATTGGATATATATGAGGAAGTTGGCATTCCTAAT TCCACGGTGGTTGTGAATATGATACATCCATTAGATGGATCAAACTGGACAAACATCATC TTCAACATTGTCCCTTTCCCAGAGAACGTGACTATATCATCAACATGGTTGAGCATTCTT AGATCAAAGTTCATGTCCTTGGTTGTACGGCAGTCATCAATCCACTTGACTGAGCCTCTA TTCGGGAATGCGTCAGCCTTTGAAGTAATTAAATTTCCAGGAGGAATAACAATTATCCCT CCACAAACTGCTTTTCTTCTTCAGAAGCCCCATGCAACTTTTAATTTTACTCTGAACTAT CCGATCTACAAATTACAAGACAGAACTAACGAGTTAAAGGATCAAATGAAGGCAGGATTA CTGCTCAATCCATACGAGAATCTGTATATCAAGTTGACAAATTCGCAAGGTTCAACGATT CTCCCGCCAACAATCGTTGAGACCTCCATCGTCCTCGAAGTTGGAAACCACCAGCCATCT GTACCAAGGATGAAACAGTTGGCGCGGACGATCACCAATTCATCTTCATCCTCAGGAAAC CTGGGCCTGAATCACACTGTATTTGGCAGGGTGAAGCAGATTAGCCTTTCATCCTATCTT AGGCATTCCTTACACAGTGGACGTGGTTCTGATGCACCGAGTCCTGCACCCATGCACCAT CATGGTCACCACAGCCACCACCACCGCCACCACCACCACAGTCACGATGACAACAGGCAT CCTGCAGCTCCCGCTCCTGCTCCAGTACATTTTCCTGCGCCACAGCCCAGATACGGTGCT CCACCTCCATCCGGTGGGTGTCCGTACAGCAAAAACAAGCCAAAGAAAAGCGGGCGTGCT GCACCAGCTGCCGAGCCTGCAGCTAATGACCACCGATCTGCTTCCATCGCCTTACCACCG CATCCATCATCGCCTTCGCCTGCTAGTTGGTCTCAGCATGCTCCCAGTACGCCGGCTGTT CCTCCCCCTCCTGCTCTACCAGAGCCACCTCTGCCCACCATCTCGTTTGCTCATCCACGT CCTCCAAGTGAACGTGGAACTGGGACGAGTCCTGCTCCAAGTGAAGAGGCGACACGAGCG GGTCCTTCTGGGATGTCACAAGTGGCACCGGCGCCTCATTCATCTTATGCCACCAGGATG CAGGGCGATGTTCCCTGCTGCTGGGTCCTTTTTGTCCTCGCGCTATGCGTCCTAACGAGC CTGCTACGATGA

Peptide Sequence

PEP ID	Zm00001d042168_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:154685639:154690340:1 gene:Zm00001d042168 transcript:Zm00001d042168_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (C3HC4-type RING finger) family protein
Sequence	MGKDAGEAQQQPDGAGGGAGGGAGGNRGGRFCFCGGGGAARVVRLQCVAALVLGVAVLLS ALFWLPPFAGWGGGKEGPDPGDEFGAAIAASFRLHKTVPELSGNKSQLELDIYEEVGIPN STVVVNMIHPLDGSNWTNIIFNIVPFPENVTISSTWLSILRSKFMSLVVRQSSIHLTEPL FGNASAFEVIKFPGGITIIPPQTAFLLQKPHATFNFTLNYPIYKLQDRTNELKDQMKAGL LLNPYENLYIKLTNSQGSTILPPTIVETSIVLEVGNHQPSVPRMKQLARTITNSSSSSGN LGLNHTVFGRVKQISLSSYLRHSLHSGRGSDAPSPAPMHHHGHHSHHHRHHHHSHDDNRH PAAPAPAPVHFPAPQPRYGAPPPSGGCPYSKNKPKKSGRAAPAAEPAANDHRSASIALPP HPSSPSPASWSQHAPSTPAVPPPPALPEPPLPTISFAHPRPPSERGTGTSPAPSEEATRA GPSGMSQVAPAPHSSYATRMQGDVPCCWVLFVLALCVLTSLLR

Transcript Sequence

Transcript ID	Zm00001d042168_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:154685639:154690340:1 gene:Zm00001d042168 gene_biotype:protein_coding transcript_biotype:protein_coding description:zinc finger (C3HC4-type RING finger) family protein
Sequence	TCGGGCCTCGGCTGCACTCGCATTCCGTTTCACCTAGCTGCGGTTTACCTCTCCCTTTCT CTCACCTTCCTCGCCCACCTCGATCGCCTCCTCCTTAAGCAACGACGCGGACGAGCGACC CGCGACCCTAGGGAGAGAGAGAGAGAGACCAGTAGTTGGGCCGACCGCACGCTCGCAGGC GCACCCACTCAGCGGCGGCAATGGCGGGGCGCCCCCTCCCCCCTCGCTCGTCGTCGGCGG CCGGCCGGGATGCGTGAGATCTCGGCGGCGGATGGGGAAGGACGCCGGCGAGGCGCAGCA GCAGCCGGACGGGGCGGGCGGTGGCGCAGGCGGCGGCGCAGGAGGAAATAGGGGCGGCCG CTTCTGCTTCTGCGGCGGCGGAGGAGCGGCGAGGGTGGTTCGGCTGCAATGCGTGGCAGC GCTCGTGCTCGGGGTGGCCGTGCTGCTGTCGGCGCTCTTCTGGCTCCCGCCCTTTGCCGG GTGGGGCGGCGGCAAGGAGGGCCCGGATCCGGGCGACGAGTTCGGAGCTGCTATAGCGGC AAGCTTTAGGCTACACAAGACAGTTCCTGAGCTGAGTGGAAATAAATCCCAGCTCGAATT GGATATATATGAGGAAGTTGGCATTCCTAATTCCACGGTGGTTGTGAATATGATACATCC ATTAGATGGATCAAACTGGACAAACATCATCTTCAACATTGTCCCTTTCCCAGAGAACGT GACTATATCATCAACATGGTTGAGCATTCTTAGATCAAAGTTCATGTCCTTGGTTGTACG GCAGTCATCAATCCACTTGACTGAGCCTCTATTCGGGAATGCGTCAGCCTTTGAAGTAAT TAAATTTCCAGGAGGAATAACAATTATCCCTCCACAAACTGCTTTTCTTCTTCAGAAGCC CCATGCAACTTTTAATTTTACTCTGAACTATCCGATCTACAAATTACAAGACAGAACTAA CGAGTTAAAGGATCAAATGAAGGCAGGATTACTGCTCAATCCATACGAGAATCTGTATAT CAAGTTGACAAATTCGCAAGGTTCAACGATTCTCCCGCCAACAATCGTTGAGACCTCCAT CGTCCTCGAAGTTGGAAACCACCAGCCATCTGTACCAAGGATGAAACAGTTGGCGCGGAC GATCACCAATTCATCTTCATCCTCAGGAAACCTGGGCCTGAATCACACTGTATTTGGCAG GGTGAAGCAGATTAGCCTTTCATCCTATCTTAGGCATTCCTTACACAGTGGACGTGGTTC TGATGCACCGAGTCCTGCACCCATGCACCATCATGGTCACCACAGCCACCACCACCGCCA CCACCACCACAGTCACGATGACAACAGGCATCCTGCAGCTCCCGCTCCTGCTCCAGTACA TTTTCCTGCGCCACAGCCCAGATACGGTGCTCCACCTCCATCCGGTGGGTGTCCGTACAG CAAAAACAAGCCAAAGAAAAGCGGGCGTGCTGCACCAGCTGCCGAGCCTGCAGCTAATGA CCACCGATCTGCTTCCATCGCCTTACCACCGCATCCATCATCGCCTTCGCCTGCTAGTTG GTCTCAGCATGCTCCCAGTACGCCGGCTGTTCCTCCCCCTCCTGCTCTACCAGAGCCACC TCTGCCCACCATCTCGTTTGCTCATCCACGTCCTCCAAGTGAACGTGGAACTGGGACGAG TCCTGCTCCAAGTGAAGAGGCGACACGAGCGGGTCCTTCTGGGATGTCACAAGTGGCACC GGCGCCTCATTCATCTTATGCCACCAGGATGCAGGGCGATGTTCCCTGCTGCTGGGTCCT TTTTGTCCTCGCGCTATGCGTCCTAACGAGCCTGCTACGATGAGAAGGAAGTGCACGGCC GGCCAACGAGATGTACATCAGCGACCGCTGGCGTACGTGCTAAAGAAGAGAAAGAGGACC CACGGGGCTCCACCGGCGCGGCGCATCTGGTTCCGGCCCGGCCACGCCACCATCCAGCAG CTCCCGGGGGCGGGGGGTGGCCACCAAAGGCACAAGGAAGCTGAGAGCCTCATCCCTTGT CAACCCCTCGGCGGGCTGTGTCATACTCTTGTCGTTCGTTGCTAGTTGTCAGCTGTCATG TAAATATGAAGGGATGGGTATAAAAGGCAAGGCAAAGCCGCAAGACGGGCGGCCGCGCGT GGTGGTCACGGGTCAAAGCCACAGGGGGGTGGCAGGCCCTTGTGCACTGCTGCTCGCGCG CCTCTGGTCTGCTGGCTGCCGTGTGTGTTCGTGTAGTGTACTGTTGCTCCTTCTCCGGCT CCGACGCTCCTCAAATGTAGAGACCTCCAGTTTCATGGAGGTTCGTTTTCTTTTCGTTGC TGTGCTTTATCCTGATTCCTGCAGGCAGTGTT