Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042148_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:153591150:153593841:-1 gene:Zm00001d042148 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytokinin oxidase 2 description: cytokinin oxidase 2
Sequence

ATGAAGCCGCCATCACTGGTGCACTGCTTCAAGCTGCTGGTCCTGCTGGCGCTCGCCAGG
CTGACCATGCACGTCCCCGACGAGGACATGCTATCGCCCCTCGGCGCGCTGCGCCTCGAC
GGTCATTTCAGCTTCCATGACGTCTCCGCCATGGCGCGGGACTTCGGCAACCAGTGCAGC
TTCCTGCCGGCCGCCGTGCTCCACCCAGGCTCGGTCTCCGATATCGCCGCCACCGTGAGG
CACGTCTTCTCCCTGGGCGAGGGCTCGCCGCTCACCGTCGCGGCGCGCGGGCATGGACAC
TCCCTCATGGGTCAGTCCCAGGCCGCCCAGGGGATCGTGGTCAGGATGGAGTCGCTCCGG
GGCGCTAGGCTCCAGGTCCACGACGGCTTTGTCGATGCCCCCGGAGGAGAGCTCTGGATC
AATGTCCTGCGTGAGACGCTGAAGCACGGCCTGGCACCCAAGTCGTGGACGGACTATCTC
CATCTCACGGTCGGTGGCACCTTGTCTAATGCGGGGGTCAGCGGCCAGGCGTTCCGCCAC
GGACCGCAGGTCAGCAATGTCAATCAACTGGAGATTGTGACAGGAAGGGGAGACGTCGTT
ACCTGCTCACCCGAGGATAACTCTGATCTCTTCTATGCTGCTCTCGGCGGTCTTGGTCAG
TTCGGGATCATAACCAGAGCAAGGATTGCACTTGAGCCTGCTCCAGAGATGGTGAGGTGG
ATAAGAGTTCTTTACTCGGATTTTGAAAGCTTCACCGAAGACCAGGAGATGTTGATCATG
GCAGAGAACTCCTTTGACTACATTGAAGGTTTTGTCATCATAAACAGGACAGGCATCCTC
AACAACTGGAGGGCGTCCTTCAAGCCACAGGACCCAGTCCAAGCAAGCCATTTCCAGTCA
GATGGAAGAGTGCTATACTGCCTCGAACTAACCAAGAACTTCAATAGTGGCGACACTGAT
ACCATGGAACAGGAAGTTGCTGTACTGCTATCTCGGCTTAGATTCATACAGTCTACTCTA
TTCCACACCGATGTCACGTACCTGGAGTTTTTGGACAGGGTGCACACCTCTGAGCTGAAG
CTGAGGGCACAAAGCCTCTGGGAAGTTCCACACCCTTGGTTGAATCTTCTGATACCGAGG
AGCTCAATCCGCAGATTTGCTACGGAAGTCTTTGGCAGGATCCTGAAAGATAGCAACAAT
GGTCCTATATTGCTTTATCCAGTGAACAAATCAAAGTGGGACAACAAAACGTCAGTGGTC
ATACCAGATGAGGAAATTTTCTACCTAGTGGGATTCCTTTCTTCAGCACCGTCTCTCTCA
GGTCACGGCAGCATTGCACATGCGATGAGCCTGAACAGCCAAATAGTAGAGTTCTGTGAA
GAGGCTGATATTGGGATGAAACAGTATCTAGCACACTACACCACACAGGAGCAGTGGAAA
ACCCACTTTGGAGCAAGGTGGGAGACATTTGAACGGAGGAAACACAGATATGATCCCCTA
GCCATCCTAGCACCAGGACAGAGAATATTCCCAAAGGCGTCACTCCCATTGTCTTTGTGA

Peptide Sequence

PEP ID

Zm00001d042148_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:153591150:153593841:-1 gene:Zm00001d042148 transcript:Zm00001d042148_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytokinin oxidase 2 description: cytokinin oxidase 2
Sequence

MKPPSLVHCFKLLVLLALARLTMHVPDEDMLSPLGALRLDGHFSFHDVSAMARDFGNQCS
FLPAAVLHPGSVSDIAATVRHVFSLGEGSPLTVAARGHGHSLMGQSQAAQGIVVRMESLR
GARLQVHDGFVDAPGGELWINVLRETLKHGLAPKSWTDYLHLTVGGTLSNAGVSGQAFRH
GPQVSNVNQLEIVTGRGDVVTCSPEDNSDLFYAALGGLGQFGIITRARIALEPAPEMVRW
IRVLYSDFESFTEDQEMLIMAENSFDYIEGFVIINRTGILNNWRASFKPQDPVQASHFQS
DGRVLYCLELTKNFNSGDTDTMEQEVAVLLSRLRFIQSTLFHTDVTYLEFLDRVHTSELK
LRAQSLWEVPHPWLNLLIPRSSIRRFATEVFGRILKDSNNGPILLYPVNKSKWDNKTSVV
IPDEEIFYLVGFLSSAPSLSGHGSIAHAMSLNSQIVEFCEEADIGMKQYLAHYTTQEQWK
THFGARWETFERRKHRYDPLAILAPGQRIFPKASLPLSL

Transcript Sequence

Transcript ID

Zm00001d042148_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:153591150:153593841:-1 gene:Zm00001d042148 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytokinin oxidase 2 description: cytokinin oxidase 2
Sequence

CTCTCTCTCTCTCTCTCTCTCTGCCTTCTGATTCCAAGCTCCCCAACTGCCCAGCACCAA
CCTGCTGACTACCATGAAGCCGCCATCACTGGTGCACTGCTTCAAGCTGCTGGTCCTGCT
GGCGCTCGCCAGGCTGACCATGCACGTCCCCGACGAGGACATGCTATCGCCCCTCGGCGC
GCTGCGCCTCGACGGTCATTTCAGCTTCCATGACGTCTCCGCCATGGCGCGGGACTTCGG
CAACCAGTGCAGCTTCCTGCCGGCCGCCGTGCTCCACCCAGGCTCGGTCTCCGATATCGC
CGCCACCGTGAGGCACGTCTTCTCCCTGGGCGAGGGCTCGCCGCTCACCGTCGCGGCGCG
CGGGCATGGACACTCCCTCATGGGTCAGTCCCAGGCCGCCCAGGGGATCGTGGTCAGGAT
GGAGTCGCTCCGGGGCGCTAGGCTCCAGGTCCACGACGGCTTTGTCGATGCCCCCGGAGG
AGAGCTCTGGATCAATGTCCTGCGTGAGACGCTGAAGCACGGCCTGGCACCCAAGTCGTG
GACGGACTATCTCCATCTCACGGTCGGTGGCACCTTGTCTAATGCGGGGGTCAGCGGCCA
GGCGTTCCGCCACGGACCGCAGGTCAGCAATGTCAATCAACTGGAGATTGTGACAGGAAG
GGGAGACGTCGTTACCTGCTCACCCGAGGATAACTCTGATCTCTTCTATGCTGCTCTCGG
CGGTCTTGGTCAGTTCGGGATCATAACCAGAGCAAGGATTGCACTTGAGCCTGCTCCAGA
GATGGTGAGGTGGATAAGAGTTCTTTACTCGGATTTTGAAAGCTTCACCGAAGACCAGGA
GATGTTGATCATGGCAGAGAACTCCTTTGACTACATTGAAGGTTTTGTCATCATAAACAG
GACAGGCATCCTCAACAACTGGAGGGCGTCCTTCAAGCCACAGGACCCAGTCCAAGCAAG
CCATTTCCAGTCAGATGGAAGAGTGCTATACTGCCTCGAACTAACCAAGAACTTCAATAG
TGGCGACACTGATACCATGGAACAGGAAGTTGCTGTACTGCTATCTCGGCTTAGATTCAT
ACAGTCTACTCTATTCCACACCGATGTCACGTACCTGGAGTTTTTGGACAGGGTGCACAC
CTCTGAGCTGAAGCTGAGGGCACAAAGCCTCTGGGAAGTTCCACACCCTTGGTTGAATCT
TCTGATACCGAGGAGCTCAATCCGCAGATTTGCTACGGAAGTCTTTGGCAGGATCCTGAA
AGATAGCAACAATGGTCCTATATTGCTTTATCCAGTGAACAAATCAAAGTGGGACAACAA
AACGTCAGTGGTCATACCAGATGAGGAAATTTTCTACCTAGTGGGATTCCTTTCTTCAGC
ACCGTCTCTCTCAGGTCACGGCAGCATTGCACATGCGATGAGCCTGAACAGCCAAATAGT
AGAGTTCTGTGAAGAGGCTGATATTGGGATGAAACAGTATCTAGCACACTACACCACACA
GGAGCAGTGGAAAACCCACTTTGGAGCAAGGTGGGAGACATTTGAACGGAGGAAACACAG
ATATGATCCCCTAGCCATCCTAGCACCAGGACAGAGAATATTCCCAAAGGCGTCACTCCC
ATTGTCTTTGTGACGGTTCCTGCTATTTAAAGGCTTCTGTAGAGCATACATTGTACAAAA
GTGTAGGTAAAAGTATCCCCTGTAAAGACAATATCTACGGAAGGTAGCTAGCCTGAAGAA
CACAGCATAGCGACTTTTTCAGTGGCCAAAGATACCTCAAAGCAGTACTTCAATGTGGAG
CAACGTCACCTGAACCCTGAAGGTGGTGAGTGCAACTTTGGAGGCAATCACTGGTAGTGG
AGCCTGGAGGGTTGTAGCGGTCCAAGGAACCTGTCTGTTGTTACAGCGTTGAGATGAGCT
GTGCTGATCAACTGATCACTAACCAGTGTCCCGAGGAAATCATGTTGGTCTGTATGTATT
TTCCGTTAACAACAGTGCAGAAGTTTGCATGAGGGTAGTGCATTGATTAGCAAATAGCAC
TGCCTGTTATTTCACTTGTAACTGGCATCTCATCTCAAGGAGAGCCTGCGTAACTGTAGC
AGGTTATATTGTTTTCCATGAGTCAGAAACTCAGAATATTAATGCTCGTGCAAAAACAGT
GTAGTCGCTTATCAATCATGGTGTTCAGAAACAGAAAAACTCTTGGAATTCTCTCAACTT
GTTCATTAAATGTTAGCAACCTATAGTGTGAGCTTGGATAACAAATAAG