Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042131_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:3:152442257:152450513:1 gene:Zm00001d042131 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase TIO
Sequence	ATGAAACCTCAGAACATCCTTATCGGGAAAGGATCTATTGTAAAGCTTTGTGACTTCGGG TTTGCTCGTGCTATGTCAGCTAACACTGTTGTATTACGCTCCATTAAAGGGACACCTTTA TATATGGCTCCAGAACTGGTGAGGGAACAGCCATATAACCATACAGCAGATTTATGGTCC CTTGGGGTCATTTTATATGAATTGTTTGTTGGACAGCCCCCCTTTTATACAAATTCGGTC TATGCACTTATCCGGCACATTGTCAAGGATCCTGTAAAATATCCAGATAATATGAGCACA AACTTTAAGAGCTTCCTGAAGGGTTTACTCAACAAGGTGCCTCAAAGTAGATTAACCTGG CCAGCATTGTTGGAGCACCCATTTGTCAAAGATGATTCAATGGGATCGGCAGCTGAGTCT CGACCCGCGCCTTTTGAAGCTAGAGGGTCTGAAGATACTCAGAAAGCAGAAGAAACACAA TCAAGGAACCAACCTTCCCCAGCCGGCCCCCAAAGTAGGATTACTGCTACCAATAGGGAA AATGCTTCTGATAAACCAAAAGGAAACAGAAAACTGGATGACCCTATGCAAGCAACTCAG GACCGCCATGGTTCACCTACTGGTGCTGTTGCTGAAAGCTGCTCTCCCTCAGAGTGTACG GCTTTGGATAAACTGGAAAAAGCCTCACAAACAGTAGAAGGTGCAAGCAGCATTGTTCAA GATATTGAAGCACTGTCAACCATTCTCACCCCTATCAAAATTTGGCTTACTAATACTCCA AGTTCAACCAGGGAACTCAACATTGATGGAGCAAATCAGTCGCTCAGAATTATTAAAAAT TTGATTGATGCTGGTTCATGCCAATCTTATGCTGCAATTGATATAAGTCTGCTTCTTGAG TTTACAAATCTCATTATCAAAACTAAGCTTTCAAATGCTTATGGACTTGTGGTGAAGTGC CTGGCAATTGCACGGAAACTACTTGATACAAGTGATGAAGTTATTTTAAATTCTTATGAC AGACACTGGTTATCCCTATATGAACTTTATTCACAGATCCTGGTTTCTACAGTGGATTCA TCTGGAAGAATATCTCGTGAGTCAACTGCCTGCCTTGCTTTGATGTTATCTCGGGTTATC TCTGGCTTGAAAGCTAGCATGTCATCTGAAGACCCAAAGCCAGTGGAAGAAAGTCTTCTC AAGATCATTGATCATGCGAGGACATCACAACTACTAGAGCTCTTGTGTGAATGTCTGATG GCTTCAGGTTCAGACACACTATCTGGTTCTACGAACATGGTACCTGCTGCTTGTGAGGCA TGCAAGGCTATTTGGTACCTAGCTCATGCTGTTGACATTATGTCCATTGGTGCACACCAT TTTTCATTTCCCTTAGCTAATTCATGGCGACAGATACATTCAATGCAAGAGCAAAGTTCA AAGGCAGATTCAAACTCTACCAATCTGATTAACATATTTGTCAAATCATTTCTCGCCTCA CGACCAATTCAGGTTGCAGTTTACCACTGCTTGCATAATGGTCTAGAATCAGCTATTCAT GCTTGTCTTCAGCTTATCTCAAGGGCCTGTCTTCAGAATGTGACTTTCTGTGCCATTATG TGTCGTCCATGGAATTCACCATCTGATGTTGACGTAGTAGAATATGGTGGAGATGGAACA ATAGTATCTGACATGTTTTCCTTATTGTCACTGTGTGGATCATATTTAAATAAGGAATCC AGGCAGAATAGCAATCAGAAATGCAAACTATCCAACCCTCATGCTCTTGTAGTGCACTGC TGCCTTGCACTAGCGACAATAGCTGCATGTTTGAAATCAGAGGGAGGATCTTCAGCATCA CTTGTCCTAACAAGTTCCCAGAAAAAACAGCGGTCCCGGCTCTCAGTTCTTGCACACCTC TCATCAGTTGATGATACAGTGAAGAGTTGCCTGCAGCCACACTGTGCATCAGCAATGCTT GCGCTCTCATCACTTGTTTCTCTTGAAAATGGTGGACAAACCAGATCGTCTCTTTGTGAA ACTGCCCTTGCTTTGTTTCCTCGTATGGCAACACTGCACACACTGCTGAAGCTTTGGTTA TCTGATGGAAGCGAGGCACTGTGTCGATATAATGCTGGTCTTCTGAATCTTTTTGGACTC CGCGATGGAAGTATTGGACTGCTGGAGACAAGGTTGAAATGGGGCGGACCATTGGCCATT GAACAAGCCTGCTCAGTTGGCATCCCACAGCTCCTAATTCGCTTGCTTACTGATGGTTTC ATAAAAGAGGTTTCTGACGGAAAAGATGGTTCGACGAGCCGCAGTGGGTTGTCTCCATTG GGAGTTGTCTGGACTCTTTCTGCTTTATCTCAATGCCTTCCTGGTGGAGTTTTTCGTGAA ATTTTGTACAGAAGGGAACAGTTAAAGCTCTTAACCGACTTGTTGTCTGATACACATCTT AAGGCATTGGCCGCCTGGACGGGTCTTGGTGGTGGGAAGAGGGGAGTTCGGGAACTGATA AACTCAGTCGTTGATATCTTGGCATTTCCATTTGTTGCAGTGCAGAGTTCTCCAAACATG CCGTCAGCATCTGCATCCATCAATAGTGGTTTCCTGCTTAATGTTGCATCACCCGGTGGG CGCATTGGTACTGAGAATAAGGAAATGCTCAAAACTATAGAGCAAAACATGCCTCAGTAC ATTCAAGTTCTACTAGAGGTTGGAATTCCTGGATGTATGCTGCGTTGTCTTGACTATGTT GACATGGAAGATCTAGGTAGGCCCTTGGCCATTGTGGCCAAAATGGCAGGCTACAGGCCA CTTGCTTTGCAGCTTCATAAAGAAGGTCTTCTAGATCCAAGTAGAGTAGCAGCATTACTC GAGGGTCCTATAGCAAAGGAGACTTTGCTTGATTTCCTCATGATTATTTCTGACCTTGCT CGCATGTCGAAGGACTTTTATGTGCCCATTGATAAAGCTGGACTTGTTGTTCTTCTGAAG AACTTCTTATCAAATGGAGACCCTGATATAAGGGCAAAAGCTTGTAGTGCCATTGGCAAC ATGTGCCGCCATAGCTCCTACTTTTATGGCCCACTTGCAGCAAATAAGGTGATCCAGCTC GTGGTTGACAGGTGTTCTGATCCTGACAAGCGCACACGAAAGTTTGCATGTTTTGCCGTT GGCAATGCTGCTTATCATAATGATATGCTGTATGAAGAATTGAGACGGTCCATACCTCAA CTCACCACTTTACTTCTTGGTCCTGAGGAGGATAAAACCAAAGGCAACGCTGCAGGCGCG CTCAGTAATCTAGTGAGGAACTCAGACATGCTTTGCGAAGACATTGTCTCCCAAGGCGCA ATTCAGGCGCTGCTGAAGATGGTCGGCAGTTACTCTACTGTTGCCCTGAGCCCCAGCAGA CGAGATGCTCTAACCGAATCTCCGCTAAGAATCGTGCTCTTCGCCCTGCGCAAGATGTGC GACCACGCCATCTGCAGGAACTTCCTACGGTCTTCGGAGCTGCTCCCCGTCATCGTCCAC CTCCGGCAGTCACCTGATCCAACGATCTCCGAGTATGCTTCTGCCATCGCGACCAGAGTG AGCCAGGCCTGA

Peptide Sequence

PEP ID	Zm00001d042131_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:3:152442257:152450513:1 gene:Zm00001d042131 transcript:Zm00001d042131_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase TIO
Sequence	MKPQNILIGKGSIVKLCDFGFARAMSANTVVLRSIKGTPLYMAPELVREQPYNHTADLWS LGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDNMSTNFKSFLKGLLNKVPQSRLTW PALLEHPFVKDDSMGSAAESRPAPFEARGSEDTQKAEETQSRNQPSPAGPQSRITATNRE NASDKPKGNRKLDDPMQATQDRHGSPTGAVAESCSPSECTALDKLEKASQTVEGASSIVQ DIEALSTILTPIKIWLTNTPSSTRELNIDGANQSLRIIKNLIDAGSCQSYAAIDISLLLE FTNLIIKTKLSNAYGLVVKCLAIARKLLDTSDEVILNSYDRHWLSLYELYSQILVSTVDS SGRISRESTACLALMLSRVISGLKASMSSEDPKPVEESLLKIIDHARTSQLLELLCECLM ASGSDTLSGSTNMVPAACEACKAIWYLAHAVDIMSIGAHHFSFPLANSWRQIHSMQEQSS KADSNSTNLINIFVKSFLASRPIQVAVYHCLHNGLESAIHACLQLISRACLQNVTFCAIM CRPWNSPSDVDVVEYGGDGTIVSDMFSLLSLCGSYLNKESRQNSNQKCKLSNPHALVVHC CLALATIAACLKSEGGSSASLVLTSSQKKQRSRLSVLAHLSSVDDTVKSCLQPHCASAML ALSSLVSLENGGQTRSSLCETALALFPRMATLHTLLKLWLSDGSEALCRYNAGLLNLFGL RDGSIGLLETRLKWGGPLAIEQACSVGIPQLLIRLLTDGFIKEVSDGKDGSTSRSGLSPL GVVWTLSALSQCLPGGVFREILYRREQLKLLTDLLSDTHLKALAAWTGLGGGKRGVRELI NSVVDILAFPFVAVQSSPNMPSASASINSGFLLNVASPGGRIGTENKEMLKTIEQNMPQY IQVLLEVGIPGCMLRCLDYVDMEDLGRPLAIVAKMAGYRPLALQLHKEGLLDPSRVAALL EGPIAKETLLDFLMIISDLARMSKDFYVPIDKAGLVVLLKNFLSNGDPDIRAKACSAIGN MCRHSSYFYGPLAANKVIQLVVDRCSDPDKRTRKFACFAVGNAAYHNDMLYEELRRSIPQ LTTLLLGPEEDKTKGNAAGALSNLVRNSDMLCEDIVSQGAIQALLKMVGSYSTVALSPSR RDALTESPLRIVLFALRKMCDHAICRNFLRSSELLPVIVHLRQSPDPTISEYASAIATRV SQA

Transcript Sequence

Transcript ID	Zm00001d042131_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:152442257:152450513:1 gene:Zm00001d042131 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase TIO
Sequence	GGGAGAACTGTTTGAGGTGCTCGAGGATGATAAATGCCTTCCAGAAGAACAAGTTCAGGC AATTGCTAAGCAGCTGGTGAAAGCATTGTATTACTTGCATTCCAATAGAATTATTCACCG GGATATGAAACCTCAGAACATCCTTATCGGGAAAGGATCTATTGTAAAGCTTTGTGACTT CGGGTTTGCTCGTGCTATGTCAGCTAACACTGTTGTATTACGCTCCATTAAAGGGACACC TTTATATATGGCTCCAGAACTGGTGAGGGAACAGCCATATAACCATACAGCAGATTTATG GTCCCTTGGGGTCATTTTATATGAATTGTTTGTTGGACAGCCCCCCTTTTATACAAATTC GGTCTATGCACTTATCCGGCACATTGTCAAGGATCCTGTAAAATATCCAGATAATATGAG CACAAACTTTAAGAGCTTCCTGAAGGGTTTACTCAACAAGGTGCCTCAAAGTAGATTAAC CTGGCCAGCATTGTTGGAGCACCCATTTGTCAAAGATGATTCAATGGGATCGGCAGCTGA GTCTCGACCCGCGCCTTTTGAAGCTAGAGGGTCTGAAGATACTCAGAAAGCAGAAGAAAC ACAATCAAGGAACCAACCTTCCCCAGCCGGCCCCCAAAGTAGGATTACTGCTACCAATAG GGAAAATGCTTCTGATAAACCAAAAGGAAACAGAAAACTGGATGACCCTATGCAAGCAAC TCAGGACCGCCATGGTTCACCTACTGGTGCTGTTGCTGAAAGCTGCTCTCCCTCAGAGTG TACGGCTTTGGATAAACTGGAAAAAGCCTCACAAACAGTAGAAGGTGCAAGCAGCATTGT TCAAGATATTGAAGCACTGTCAACCATTCTCACCCCTATCAAAATTTGGCTTACTAATAC TCCAAGTTCAACCAGGGAACTCAACATTGATGGAGCAAATCAGTCGCTCAGAATTATTAA AAATTTGATTGATGCTGGTTCATGCCAATCTTATGCTGCAATTGATATAAGTCTGCTTCT TGAGTTTACAAATCTCATTATCAAAACTAAGCTTTCAAATGCTTATGGACTTGTGGTGAA GTGCCTGGCAATTGCACGGAAACTACTTGATACAAGTGATGAAGTTATTTTAAATTCTTA TGACAGACACTGGTTATCCCTATATGAACTTTATTCACAGATCCTGGTTTCTACAGTGGA TTCATCTGGAAGAATATCTCGTGAGTCAACTGCCTGCCTTGCTTTGATGTTATCTCGGGT TATCTCTGGCTTGAAAGCTAGCATGTCATCTGAAGACCCAAAGCCAGTGGAAGAAAGTCT TCTCAAGATCATTGATCATGCGAGGACATCACAACTACTAGAGCTCTTGTGTGAATGTCT GATGGCTTCAGGTTCAGACACACTATCTGGTTCTACGAACATGGTACCTGCTGCTTGTGA GGCATGCAAGGCTATTTGGTACCTAGCTCATGCTGTTGACATTATGTCCATTGGTGCACA CCATTTTTCATTTCCCTTAGCTAATTCATGGCGACAGATACATTCAATGCAAGAGCAAAG TTCAAAGGCAGATTCAAACTCTACCAATCTGATTAACATATTTGTCAAATCATTTCTCGC CTCACGACCAATTCAGGTTGCAGTTTACCACTGCTTGCATAATGGTCTAGAATCAGCTAT TCATGCTTGTCTTCAGCTTATCTCAAGGGCCTGTCTTCAGAATGTGACTTTCTGTGCCAT TATGTGTCGTCCATGGAATTCACCATCTGATGTTGACGTAGTAGAATATGGTGGAGATGG AACAATAGTATCTGACATGTTTTCCTTATTGTCACTGTGTGGATCATATTTAAATAAGGA ATCCAGGCAGAATAGCAATCAGAAATGCAAACTATCCAACCCTCATGCTCTTGTAGTGCA CTGCTGCCTTGCACTAGCGACAATAGCTGCATGTTTGAAATCAGAGGGAGGATCTTCAGC ATCACTTGTCCTAACAAGTTCCCAGAAAAAACAGCGGTCCCGGCTCTCAGTTCTTGCACA CCTCTCATCAGTTGATGATACAGTGAAGAGTTGCCTGCAGCCACACTGTGCATCAGCAAT GCTTGCGCTCTCATCACTTGTTTCTCTTGAAAATGGTGGACAAACCAGATCGTCTCTTTG TGAAACTGCCCTTGCTTTGTTTCCTCGTATGGCAACACTGCACACACTGCTGAAGCTTTG GTTATCTGATGGAAGCGAGGCACTGTGTCGATATAATGCTGGTCTTCTGAATCTTTTTGG ACTCCGCGATGGAAGTATTGGACTGCTGGAGACAAGGTTGAAATGGGGCGGACCATTGGC CATTGAACAAGCCTGCTCAGTTGGCATCCCACAGCTCCTAATTCGCTTGCTTACTGATGG TTTCATAAAAGAGGTTTCTGACGGAAAAGATGGTTCGACGAGCCGCAGTGGGTTGTCTCC ATTGGGAGTTGTCTGGACTCTTTCTGCTTTATCTCAATGCCTTCCTGGTGGAGTTTTTCG TGAAATTTTGTACAGAAGGGAACAGTTAAAGCTCTTAACCGACTTGTTGTCTGATACACA TCTTAAGGCATTGGCCGCCTGGACGGGTCTTGGTGGTGGGAAGAGGGGAGTTCGGGAACT GATAAACTCAGTCGTTGATATCTTGGCATTTCCATTTGTTGCAGTGCAGAGTTCTCCAAA CATGCCGTCAGCATCTGCATCCATCAATAGTGGTTTCCTGCTTAATGTTGCATCACCCGG TGGGCGCATTGGTACTGAGAATAAGGAAATGCTCAAAACTATAGAGCAAAACATGCCTCA GTACATTCAAGTTCTACTAGAGGTTGGAATTCCTGGATGTATGCTGCGTTGTCTTGACTA TGTTGACATGGAAGATCTAGGTAGGCCCTTGGCCATTGTGGCCAAAATGGCAGGCTACAG GCCACTTGCTTTGCAGCTTCATAAAGAAGGTCTTCTAGATCCAAGTAGAGTAGCAGCATT ACTCGAGGGTCCTATAGCAAAGGAGACTTTGCTTGATTTCCTCATGATTATTTCTGACCT TGCTCGCATGTCGAAGGACTTTTATGTGCCCATTGATAAAGCTGGACTTGTTGTTCTTCT GAAGAACTTCTTATCAAATGGAGACCCTGATATAAGGGCAAAAGCTTGTAGTGCCATTGG CAACATGTGCCGCCATAGCTCCTACTTTTATGGCCCACTTGCAGCAAATAAGGTGATCCA GCTCGTGGTTGACAGGTGTTCTGATCCTGACAAGCGCACACGAAAGTTTGCATGTTTTGC CGTTGGCAATGCTGCTTATCATAATGATATGCTGTATGAAGAATTGAGACGGTCCATACC TCAACTCACCACTTTACTTCTTGGTCCTGAGGAGGATAAAACCAAAGGCAACGCTGCAGG CGCGCTCAGTAATCTAGTGAGGAACTCAGACATGCTTTGCGAAGACATTGTCTCCCAAGG CGCAATTCAGGCGCTGCTGAAGATGGTCGGCAGTTACTCTACTGTTGCCCTGAGCCCCAG CAGACGAGATGCTCTAACCGAATCTCCGCTAAGAATCGTGCTCTTCGCCCTGCGCAAGAT GTGCGACCACGCCATCTGCAGGAACTTCCTACGGTCTTCGGAGCTGCTCCCCGTCATCGT CCACCTCCGGCAGTCACCTGATCCAACGATCTCCGAGTATGCTTCTGCCATCGCGACCAG AGTGAGCCAGGCCTGAGTGCCTGACGTTTCTCTGGACAGGCGCAGCTTAAGGTGTGCCAC CCTGGGCTGGGCATGATCATGCCACAGCGGCCCAAATCTACGATCCATCTGCAGCTGTAA TGTAGTGTATGGTTTACGGATCAAGCAAGCTTAGCTTGTGCATATGCATAAGACTTCTGA AAAAAGAGCGATTCCATTCGCTGTCTGTACATACGCTGATACGCACCACCAGAACTGAAG CTACATGTCATGTGTGTTGATGTATGTATATGCTGCTAGGGTCGTGGCCATCGAATAGAT TCATATTTTGCACGGATGTTAGCACTGTATCGTTTTTTTTTGGCTACCAACAAATACGAT GATGT