Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042130_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:152437021:152441071:-1 gene:Zm00001d042130 gene_biotype:protein_coding transcript_biotype:protein_coding description:Crossover junction endonuclease MUS81
Sequence

ATGGCGGCGCCGGCGCCGGCGTTGATGCAGCTCAAGGTGCGGATCCCGGAGAACGAGGAG
GTGGCTCGCTGCCTCCACGAGAAGCGGCTGTCTATGAGGGAGCAGCCGGCCGGTTTCAAG
GAGCACCTGGACCGCACGTTCGCCAAAGCCTACCGCAATGTCTGCGCCGCCAATGAGCCC
ATCCGGACTCTCAAGGAGTTCTCCAAAATCAATGGTGTAGGACCATGGCTCATACGCTGT
ATGAAAGGCTTCTTTGCAGAGTCCAAGCAGGATTCTCCAGCGAAAGGAAAGAAAACAAGA
GTACCAAAGTGCTGTGTGACAAAGAAGAAAACTGCTGCTTCTGCTTCTCTTGGCAAGGGA
CCTCCTTCCAACTTAAATTGTCAGAATGCTCAGTTTTCTTCATCCCAAGGAACATTGGAG
CTGCAACCATCTGGTAAAACGGGTTCTACTGACTTCAATATGCTAGACAAGGATGTTGTA
TCAATGAACAATTGTATACTGGCTATGCCACCTCGTCAATCAAGTGAAGAGTTTCTTGAA
GCTTACGAGGTTGTTCTGATATTGGATGATCGTGAGAATTTTGGGTATTGTTCAAGAAAA
GTTGCTTCAAAAAAGGTTGCTGATAACATTGGCTCGCAGTTTAACGTACCTGTAGAGGTT
AAACGTTTGCCTGTAGGTGATGGCATATGGATCGCTCGTCATAAAAAAAATTTTACAGAA
TATGTTCTAGATTTTATTGTTGAAAGGAAAAATGTTGCAGATTTAGGTAGTTCAATTAGA
GACAATCGATACAAAGATCAGAAAACAAGGCTGCAGGTACTGTTTGGACTTTCATTGACT
ACATGTTATTGTTTAAAACCTGAAATGTTCATTTCCCACTTGTCTCTTTCTTCAGTTTAA

Peptide Sequence

PEP ID

Zm00001d042130_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:152437021:152441071:-1 gene:Zm00001d042130 transcript:Zm00001d042130_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Crossover junction endonuclease MUS81
Sequence

MAAPAPALMQLKVRIPENEEVARCLHEKRLSMREQPAGFKEHLDRTFAKAYRNVCAANEP
IRTLKEFSKINGVGPWLIRCMKGFFAESKQDSPAKGKKTRVPKCCVTKKKTAASASLGKG
PPSNLNCQNAQFSSSQGTLELQPSGKTGSTDFNMLDKDVVSMNNCILAMPPRQSSEEFLE
AYEVVLILDDRENFGYCSRKVASKKVADNIGSQFNVPVEVKRLPVGDGIWIARHKKNFTE
YVLDFIVERKNVADLGSSIRDNRYKDQKTRLQVLFGLSLTTCYCLKPEMFISHLSLSSV

Transcript Sequence

Transcript ID

Zm00001d042130_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:152437021:152441071:-1 gene:Zm00001d042130 gene_biotype:protein_coding transcript_biotype:protein_coding description:Crossover junction endonuclease MUS81
Sequence

CAAATCAGTTCGAGCTTCGAACCATTTCAACGGTGACCTGTTCTTCCCCACCCGGCCACG
GCTACGGCCACGGGTCACCCCTCCACCCCAAACCCTAGCACCCCCGATCCAGCAGCAGCC
CCCCTCTCCGAGCTCCAAAACCTCTCAGAGATGGCGGCGCCGGCGCCGGCGTTGATGCAG
CTCAAGGTGCGGATCCCGGAGAACGAGGAGGTGGCTCGCTGCCTCCACGAGAAGCGGCTG
TCTATGAGGGAGCAGCCGGCCGGTTTCAAGGAGCACCTGGACCGCACGTTCGCCAAAGCC
TACCGCAATGTCTGCGCCGCCAATGAGCCCATCCGGACTCTCAAGGAGTTCTCCAAAATC
AATGGTGTAGGACCATGGCTCATACGCTGTATGAAAGGCTTCTTTGCAGAGTCCAAGCAG
GATTCTCCAGCGAAAGGAAAGAAAACAAGAGTACCAAAGTGCTGTGTGACAAAGAAGAAA
ACTGCTGCTTCTGCTTCTCTTGGCAAGGGACCTCCTTCCAACTTAAATTGTCAGAATGCT
CAGTTTTCTTCATCCCAAGGAACATTGGAGCTGCAACCATCTGGTAAAACGGGTTCTACT
GACTTCAATATGCTAGACAAGGATGTTGTATCAATGAACAATTGTATACTGGCTATGCCA
CCTCGTCAATCAAGTGAAGAGTTTCTTGAAGCTTACGAGGTTGTTCTGATATTGGATGAT
CGTGAGAATTTTGGGTATTGTTCAAGAAAAGTTGCTTCAAAAAAGGTTGCTGATAACATT
GGCTCGCAGTTTAACGTACCTGTAGAGGTTAAACGTTTGCCTGTAGGTGATGGCATATGG
ATCGCTCGTCATAAAAAAAATTTTACAGAATATGTTCTAGATTTTATTGTTGAAAGGAAA
AATGTTGCAGATTTAGGTAGTTCAATTAGAGACAATCGATACAAAGATCAGAAAACAAGG
CTGCAGGTACTGTTTGGACTTTCATTGACTACATGTTATTGTTTAAAACCTGAAATGTTC
ATTTCCCACTTGTCTCTTTCTTCAGTTTAAATTGTTCAATATTCCATGTCTCTGCCGTTG
CTTGTTTCTTGTGATGATCCCATTCGGTAGTTGTGGAAGGCTGGAAGCTAAACGTTAAAA
AGTAACTTTTTGTCACTATTGTTTCTAATATGTGAATGATTCTCCTATGCAGCAATCAAA
ATGATGATTAATAATTTAATATCATGTTTATGTTTAACTTTAACATCATTATCTTTATGG
AAAATGTAATAGTCTATCAAAGAATTATCTGTAACTTATTTTGCATGTCATGCTACTATT
GTAGGTAGTGCTGTTATTAAGAAACAATGTTTTTTACTTTTCCTACGGTTGACGTTGATG
ATGACTTGTAGATAAATGCTGAAAATGAGACAGAGATGAAAGGTTAATTATGGAAATATA
GATTGCTCTGTTCCTAGACGGATTGTTTTGTCCTTGTTTATTTGAGAAACAAAAACAATA
CAATGAGATACAACCATTTGTTGTGCCTTGTAGAGATGCGGGTTAAGGAAGCTTATGTAT
CTTGTCGAAGGTGATCCAAATACTTCAAAAGGATCAGCAGCAAGCATAAAAACAGCCTGC
TTTACCACTGAGATTTTCGAAGGATTTGATGTTCTGCGTACCAATGGGTATACTGATACC
ATGAGAACATATGGTTATCTTACACTCTCGATAATGGATTACTACAGCACAAATTTCTGC
AGACTTGATAAAAGTGCCTGTATATGCCCAACCTATGATGAGTTTGAGAGACACTGTCAT
TGCCTTCAGAAAAGAACAGTGAGCCAAATATTTGCTCTGCAGCTTATGCAGGTGCCACAA
GTAACAGAGAAAGTTGCATTAACTGTTATAGAGTTCTATCCAACTCTTTTCTCACTCGCA
AGGGCGTACTCCATGCTTGAAGGTGATATCCATGCCCAAGAGGAGATGTTGAAGAACAAG
AGCAAGATGATAAATGCAGGGGCTAGTAGAAATATCTTCAGGCTTGTCTGGGGTGATGGA
TGTCAATCTTCAGGGTTAATTTTGGACTAGCCGACTTAACTGAGTATATCACCGACTTGG
TGATCTCGAGGCATATTATTGTGTGGTTCACTAGCCCCTTATGCTCAGATATTCAATTGA
AAGGCTTTCGCATTCTGAAGGCAAATGATCCAATTGAACACTGACCGTTTGGGAGCATGT
AGTCACCATGAAAGTGTCTGAAAGTGCCTCCACAAGATGTAGAGCCTGTTTGGTTCGTGG
CTAAGGACATATTTGGTGTGGTGCCTACGCCGCCACACCGCGCCACACTTTTCAAGCCGC
AGGTGTGGCGGCCGATTTGGCCGCCGCGGGTTAGGCGCGGTGTGGCCGCCTAGGCGCCAC
ACCAAACATGCCCTAAATGTGCCACATTTTGCCTAAGGTTAGTCGTCTGTATTGAACAAT
TAACCTTAGGCAGAAAGGTTATGCAAATTTTAATTGCAAGTTAGTCAGTGAACCAAATAT
GCTCGTAATGTTATCTGGATGAGATGCGTTGTGTTTCATTAT