Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042092_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:150544723:150546923:1 gene:Zm00001d042092 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline synthase co-transcribed bacterial homolog protein
Sequence

ATGGCAGCGACTGCGGCGGAGGGGGTGGCCGCGACGGCGCTGCGAGCCGTGCTGGGGCGG
GCGGGTATGGCGGCGGAGCGGTCGGGGTGCGCCGCGGAGGCGGTACGGGTTGTGGCGGTG
GGGAAGACCAAGCCTGTTTCGATGCTGCGGCAGCTATACGACGCGGGCCACCGCTGCTTC
GGCGAGAACTACGTGCAGGAGTTCGTCACCAAGGCCCCCCAGCTTCCGCAAGATACCCGG
TGGCATTTTATCGGGCACCTGCAGAGCAACAAAGTGAAACCACTGTTAGCTGCTGTTCCA
AATCTTGATATGGTTGAGGGCGTAGACAATGAAAAGATTGCTAACCACCTAGATCGAGCT
GTCAACAGTTTGGGAAGGCAGCCTTTGAAAGTTTTGGTTCAAGTGAACACTAGTGGAGAA
GAATCTAAATCTGGAATCGATCCCTCCAAATGTGTCGACCTTGCTAAGCATGTGAAACTA
GCATGCCCACACCTAATATTTTCAGGTCTGATGACAATAGGTATGAAAGACTACTCGTCA
ACACCAGAAAATTTTAAGGCATTGGTTAATTGTAAGCTTGAAGTTTGCAAGGCCCTTGAC
ATACCAACAGAACAGTTTGAACTCTCCATGGGAATGTCTGGTGACTTTGAGCAAGCGATT
GAGATGGGCAGCACGAATGTGAGGATTGGATCAACCATTTTTGGACCAAGGGAGTATCCA
AACAAAAGGCAGAACTAG

Peptide Sequence

PEP ID

Zm00001d042092_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:150544723:150546923:1 gene:Zm00001d042092 transcript:Zm00001d042092_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline synthase co-transcribed bacterial homolog protein
Sequence

MAATAAEGVAATALRAVLGRAGMAAERSGCAAEAVRVVAVGKTKPVSMLRQLYDAGHRCF
GENYVQEFVTKAPQLPQDTRWHFIGHLQSNKVKPLLAAVPNLDMVEGVDNEKIANHLDRA
VNSLGRQPLKVLVQVNTSGEESKSGIDPSKCVDLAKHVKLACPHLIFSGLMTIGMKDYSS
TPENFKALVNCKLEVCKALDIPTEQFELSMGMSGDFEQAIEMGSTNVRIGSTIFGPREYP
NKRQN

Transcript Sequence

Transcript ID

Zm00001d042092_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:150544723:150546923:1 gene:Zm00001d042092 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline synthase co-transcribed bacterial homolog protein
Sequence

ATCGAAGACAGGAGGAGAAAGGAGAGGTGGTGGGGCGATGGCAGCGACTGCGGCGGAGGG
GGTGGCCGCGACGGCGCTGCGAGCCGTGCTGGGGCGGGCGGGTATGGCGGCGGAGCGGTC
GGGGTGCGCCGCGGAGGCGGTACGGGTTGTGGCGGTGGGGAAGACCAAGCCTGTTTCGAT
GCTGCGGCAGCTATACGACGCGGGCCACCGCTGCTTCGGCGAGAACTACGTGCAGGAGTT
CGTCACCAAGGCCCCCCAGCTTCCGCAAGATACCCGGTGGCATTTTATCGGGCACCTGCA
GAGCAACAAAGTGAAACCACTGTTAGCTGCTGTTCCAAATCTTGATATGGTTGAGGGCGT
AGACAATGAAAAGATTGCTAACCACCTAGATCGAGCTGTCAACAGTTTGGGAAGGCAGCC
TTTGAAAGTTTTGGTTCAAGTGAACACTAGTGGAGAAGAATCTAAATCTGGAATCGATCC
CTCCAAATGTGTCGACCTTGCTAAGCATGTGAAACTAGCATGCCCACACCTAATATTTTC
AGGTCTGATGACAATAGGTATGAAAGACTACTCGTCAACACCAGAAAATTTTAAGGCATT
GGTTAATTGTAAGCTTGAAGTTTGCAAGGCCCTTGACATACCAACAGAACAGTTTGAACT
CTCCATGGGAATGTCTGGTGACTTTGAGCAAGCGATTGAGATGGGCAGCACGAATGTGAG
GATTGGATCAACCATTTTTGGACCAAGGGAGTATCCAAACAAAAGGCAGAACTAGTGAGA
TTCAACGCATAAGTGTCATCTCAATACCCAGTCCTCTTGATTAACCTTTTGCCTATGTAA
GCATGATGCTATGTATAAATGCACATGTGAATAGGTAACATGTACAACCTCATACAACAC
TGTTTGCAGGGGGAGGGGGGGGAACTCTCCATACAACAGTACGGCACTGTATAAGAAATT
TTGTGACATGGCCTTGAATAGAAATTTCATAAAAAAAGTTCTTC