Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042091_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:3:150530572:150543930:1 gene:Zm00001d042091 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flowering time control protein FY
Sequence	ATGATGCGGCAGCAGCAGCAGCAGCTTCCACCTCCGCCGCAGCACCCGCCGCCCCAAGCC TCCTCCGCCGCCGGTGGCGGCGGCGGTGGCGAGTTCTACCGCGGCCCGCCGATGCGGCAG CTGTCCGCGGCGTCCTCCACCAATCTCCCGCCCGACTACGCCGCACACCCGGCCCCCCCG TCACAGCAGCAGCATCAGCCTCCTTACGACGCTTATGGTGACAGTTTTGGTGCTAAAAGG ATGCGGAAGCCTGTCCAGCGACGAACAGTGGACTACACAAGCAGTGTTGTCCGTTATGTT CAGGCTCGCATGTGGCAGCGGGACGCTAGGGATAGATTCACATTGCAGCCAACTCCAGCA GCTGTCCTGGATATGTTACCTTCTGTCGCATATCCAGACAATCCCTCAACAAGTTTTGCT GCCAAATTTGTACATTCGTCAATCAATAAGAACCGGTGCTCTATTAATCGTGTCTTGTGG ACCCCTACAGGCCGTCGACTTATCACTGGATCACAAAGTGGTGAATTTACGCTATGGAAT GGGCAATCTTTTAACTTTGAAATGATACTTCAGGCTCATGATCTACCTGTGAGATCAATG GTTTGGAGTCACAATGAAAACTGGATGGTGACGGGAGATGATGGTGGTGCAATCAAGTAT TGGCAAAGTAACATGAACAACGTCAAAGTGAATAAAACAGCTCATAGAGAATCAGTTCGT GGTTTAAGTTTTTCCAGGACAGACTTAAAATTCTGCTCCTGCTCCGATGACCGAACAGTG AAGGTTTGGGACTTCGCAAGATGCCAAGAGGAAAAATCATTAACTGGCCACGGTTGGGAT GTTAAAACTGTCGATTGGCATCCTACAAAGTCTTTACTGGTTTCAGGTGGCAAAGACTAT CTTGTGAAACTTTGGGATGCAAAAAGTGGCAGAGAGCTGAGCTCATTCCATGGTCATAAA AATATTGTGCATTGCGTGAAGTGGAATCAGAATGGGAACTGGGTACTGACTGCCTCGAAG GATCAGATTATTAAGCTGTATGATATTAGATCCATGAAAGAGCTGCAATCCTTCCGTGGG CACACCAAGGACGTCACTGCATTGGCGTGGCACCCATTTCATGAAGAATATTTTGTTAGT GGGAGCTTTGATGGAGCTATATTTCATTGGTTAGTCGGCCATGAAGCTCCACAGATTGAA ATAAGTAATGCACATGACAGTAGTGTCTGGGATCTTTCGTGGCATCCTGTAGGCTATCTA CTTTGCAGTGGAGGCAATGATCACGCTACAAAGTTCTGGTGTAGAAACAGGCCTGGTGAT CTTACCCGTGATAGATACAACAGTGGCCAAATGCAAGGTTTTGGTGACCAACATGCTGCT TTTGGTGCTCGTGGTATGGGTGGATTCCAGATGCCTGAACCTCCAATAACGCCTGGACCA TTTGCTCCTGGATTGTCACGCAATGAAGGTACCATCCCTGGCATTGGGGTTGCAATGACC TTGGCAGGCCAGTCTTTTGATGGATCTGATGGAGAGCAGAGGCCATCTATTCCGGGTCTT CCACCTGGGCAACCCCCGCTGCCACCAGGTCCTCATCCATCACTTCTTGGGCAGCAACAA CAGTATCAACAGATACCTCAGCAGCAACATCCCCAGTTTTCGCAGCCACCACCTCCGAAC ATGCCCCAACTGCAGGCACCAGCTCACATGCTTTCACATTCACAAGGATCTCGGCCTACT CTTCCCCAGCTTCCACCAATGGGTGGACCATCAGTGCCATCACAAGTGAACCCACCGCTT CCGCCTATGCCTCACCCAACGAGTCAGATGATGCCCCAAATGCCACAGCACATGATGGGC CTAAATCAGATGCATGCTGGTTCTGTGCCTCCTGGTACTGTACCCCCAATGGGTGGGTTC CCAAGTGGGATGGGAAACATCCAAGGAGCATCAGGTTCGTCTGGCGTACAAAATTTTCCT ATGGGTGGCATGTATAATCGGCCTCAGGGACAAATGGCTCCACAAGGGCAAATGACATCC ATTCCTGGTCTAAGCTCTTACCAGGGAATGGGTAATGTTGGCCTTACACCGCCACCGCCA CAGCACCCGCCGCCTCGAGGAGGCTCGGCAACACAGTGA

Peptide Sequence

PEP ID	Zm00001d042091_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:3:150530572:150543930:1 gene:Zm00001d042091 transcript:Zm00001d042091_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flowering time control protein FY
Sequence	MMRQQQQQLPPPPQHPPPQASSAAGGGGGGEFYRGPPMRQLSAASSTNLPPDYAAHPAPP SQQQHQPPYDAYGDSFGAKRMRKPVQRRTVDYTSSVVRYVQARMWQRDARDRFTLQPTPA AVLDMLPSVAYPDNPSTSFAAKFVHSSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWN GQSFNFEMILQAHDLPVRSMVWSHNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHRESVR GLSFSRTDLKFCSCSDDRTVKVWDFARCQEEKSLTGHGWDVKTVDWHPTKSLLVSGGKDY LVKLWDAKSGRELSSFHGHKNIVHCVKWNQNGNWVLTASKDQIIKLYDIRSMKELQSFRG HTKDVTALAWHPFHEEYFVSGSFDGAIFHWLVGHEAPQIEISNAHDSSVWDLSWHPVGYL LCSGGNDHATKFWCRNRPGDLTRDRYNSGQMQGFGDQHAAFGARGMGGFQMPEPPITPGP FAPGLSRNEGTIPGIGVAMTLAGQSFDGSDGEQRPSIPGLPPGQPPLPPGPHPSLLGQQQ QYQQIPQQQHPQFSQPPPPNMPQLQAPAHMLSHSQGSRPTLPQLPPMGGPSVPSQVNPPL PPMPHPTSQMMPQMPQHMMGLNQMHAGSVPPGTVPPMGGFPSGMGNIQGASGSSGVQNFP MGGMYNRPQGQMAPQGQMTSIPGLSSYQGMGNVGLTPPPPQHPPPRGGSATQ

Transcript Sequence

Transcript ID	Zm00001d042091_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:150530572:150543930:1 gene:Zm00001d042091 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flowering time control protein FY
Sequence	ATCGTCTCACGGACGCCGAACCCAGAAGCCGCCGACCCCTTTCCCGCCGCACGGATCCAA AACCCTAGCCCCTCCTCGGCGTTTTTCCCCTCCCGGCGACGGCGAGGCGGCGGAGATGAT GCGGCAGCAGCAGCAGCAGCTTCCACCTCCGCCGCAGCACCCGCCGCCCCAAGCCTCCTC CGCCGCCGGTGGCGGCGGCGGTGGCGAGTTCTACCGCGGCCCGCCGATGCGGCAGCTGTC CGCGGCGTCCTCCACCAATCTCCCGCCCGACTACGCCGCACACCCGGCCCCCCCGTCACA GCAGCAGCATCAGCCTCCTTACGACGCTTATGGTGACAGTTTTGGTGCTAAAAGGATGCG GAAGCCTGTCCAGCGACGAACAGTGGACTACACAAGCAGTGTTGTCCGTTATGTTCAGGC TCGCATGTGGCAGCGGGACGCTAGGGATAGATTCACATTGCAGCCAACTCCAGCAGCTGT CCTGGATATGTTACCTTCTGTCGCATATCCAGACAATCCCTCAACAAGTTTTGCTGCCAA ATTTGTACATTCGTCAATCAATAAGAACCGGTGCTCTATTAATCGTGTCTTGTGGACCCC TACAGGCCGTCGACTTATCACTGGATCACAAAGTGGTGAATTTACGCTATGGAATGGGCA ATCTTTTAACTTTGAAATGATACTTCAGGCTCATGATCTACCTGTGAGATCAATGGTTTG GAGTCACAATGAAAACTGGATGGTGACGGGAGATGATGGTGGTGCAATCAAGTATTGGCA AAGTAACATGAACAACGTCAAAGTGAATAAAACAGCTCATAGAGAATCAGTTCGTGGTTT AAGTTTTTCCAGGACAGACTTAAAATTCTGCTCCTGCTCCGATGACCGAACAGTGAAGGT TTGGGACTTCGCAAGATGCCAAGAGGAAAAATCATTAACTGGCCACGGTTGGGATGTTAA AACTGTCGATTGGCATCCTACAAAGTCTTTACTGGTTTCAGGTGGCAAAGACTATCTTGT GAAACTTTGGGATGCAAAAAGTGGCAGAGAGCTGAGCTCATTCCATGGTCATAAAAATAT TGTGCATTGCGTGAAGTGGAATCAGAATGGGAACTGGGTACTGACTGCCTCGAAGGATCA GATTATTAAGCTGTATGATATTAGATCCATGAAAGAGCTGCAATCCTTCCGTGGGCACAC CAAGGACGTCACTGCATTGGCGTGGCACCCATTTCATGAAGAATATTTTGTTAGTGGGAG CTTTGATGGAGCTATATTTCATTGGTTAGTCGGCCATGAAGCTCCACAGATTGAAATAAG TAATGCACATGACAGTAGTGTCTGGGATCTTTCGTGGCATCCTGTAGGCTATCTACTTTG CAGTGGAGGCAATGATCACGCTACAAAGTTCTGGTGTAGAAACAGGCCTGGTGATCTTAC CCGTGATAGATACAACAGTGGCCAAATGCAAGGTTTTGGTGACCAACATGCTGCTTTTGG TGCTCGTGGTATGGGTGGATTCCAGATGCCTGAACCTCCAATAACGCCTGGACCATTTGC TCCTGGATTGTCACGCAATGAAGGTACCATCCCTGGCATTGGGGTTGCAATGACCTTGGC AGGCCAGTCTTTTGATGGATCTGATGGAGAGCAGAGGCCATCTATTCCGGGTCTTCCACC TGGGCAACCCCCGCTGCCACCAGGTCCTCATCCATCACTTCTTGGGCAGCAACAACAGTA TCAACAGATACCTCAGCAGCAACATCCCCAGTTTTCGCAGCCACCACCTCCGAACATGCC CCAACTGCAGGCACCAGCTCACATGCTTTCACATTCACAAGGATCTCGGCCTACTCTTCC CCAGCTTCCACCAATGGGTGGACCATCAGTGCCATCACAAGTGAACCCACCGCTTCCGCC TATGCCTCACCCAACGAGTCAGATGATGCCCCAAATGCCACAGCACATGATGGGCCTAAA TCAGATGCATGCTGGTTCTGTGCCTCCTGGTACTGTACCCCCAATGGGTGGGTTCCCAAG TGGGATGGGAAACATCCAAGGAGCATCAGGTTCGTCTGGCGTACAAAATTTTCCTATGGG TGGCATGTATAATCGGCCTCAGGGACAAATGGCTCCACAAGGGCAAATGACATCCATTCC TGGTCTAAGCTCTTACCAGGGAATGGGTAATGTTGGCCTTACACCGCCACCGCCACAGCA CCCGCCGCCTCGAGGAGGCTCGGCAACACAGTGACCATCCCTGGAGCAAAACAAGGATTG TACTGAACCTAAACTTTCTCGTGACACTAAATTTGTAGCATGTAAATCCATCTCGAGCAA TATCAGCGTGTCTAGACTCCCGCAAATCACGAGGGATTTCTTCACGATTATTGCTCAGGC AGCTAGGATTTTTGCTATCTCGTGCTGTGGTTTACAACTGGGGGCCTTCTGTCATGTGCC TCATTTGTACTGTAATTCGAATCGTGCCTTTACTTGCCGGCTGCTTAGATGTTGAACATA GAGAATTCTTTCCCT