Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042074_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:3:149691865:149700456:1 gene:Zm00001d042074 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Sequence	ATGTTGTATGCAGTTCCTCCCAGGGGTTTCTTTCCATCAGATTCTAATGCTGGATCAGTC CATTCTATGTCTTCTGGACAATCGGATAACACAAACGGGCACTCAAGAGGCGTCCCAATG GATGCTTTCCGAGTTAGTTATTCAAGTGCCGTTAGTTCATCTAGTCATGGTTCTGGTCAT GATGATGGTGATGCTTTAGGCGATGTTTTCATATGGGGAGAAGGAACTGGGGAAGGAATT CTTGGCGGTGGTGGTTCAAGAGTCGGAAGCTCCTCAGGTGCAAAAATGGACTGCCTTGTA CCAAAACCATTAGAATTTGCCGTGCGACTTGATGTGCAGAACATATCTTGTGGAGGAAGG CATGCTGCACTTGTTACTAAACAAGGTGAGATATACTCATGGGGTGAGGAATCAGGGGGA CGGCTTGGTCATGGTGTTGATTGTGATGTGTCACAGCCAAAACTTATTGATGCTCTTTCT CATATGAACATTGAGCTTGTAGCATGTGGAGAATACCACACTTGTGCTGTTACACTATCT GGAGATCTTTACACATGGGGGGATGGCACATTTAAATTTGGGCTTTTGGGTCATGGAAAT GATGTCAGTCACTGGGTACCCAAGCATGTGAATGGACCATTAGAGGGTATACATGTTTCG TCAATTTCATGTGGACCTTGGCATACAGCCCTAGTAACTTCCGCTGGACAGCTTTTCACA TTTGGTGATGGATCTTTTGGGGTCCTGGGCCATGGAGATCGTGAGAGTATCTCGGTCCCC AGGGAAGTTGAATCTCTCAAAGGGTTACGTACGGTGCGGGCAGCTTGTGGTGTTTGGCAC ACTGCTGCAGTTGTAGAAGTAATGTCTGTGAATTCAAATTCTAGCAATTGTTCTTCTGGT AAGATATTTACATGGGGTGATGGTGATAAAGGTCGCTTAGGTCATGGTGACAAGGAACCA AAACTTGTCCCAACTTGTGTGGCTGCTTTGGTGGAGCCCAATTTTTGTCAGGTTGCTTGT GGGCATTGCTTGACAGTAGCCCTAACAACTTCTGGGCATGTGTATACAATGGGCAGTGCT GTCTATGGTCAACTTGGGAATGCACAAGCTGATGGCATGCTTCCTGTGCGTGTTGAAGGC AAGCTATACAAAAACTTTGTGGAGGAGATTTCATGTGGTGCTTATCATGTGGCTGTATTG ACTTCTAGGACTGAGGTGTACACATGGGGAAAAGGTGCAAATGGCCGGTTAGGTCATGGC GATACTGAGGATAAGAATACTCCTACATTGGTTGAAGCACTGAAAGATAAACAAGTCAGA AATGTTGTTTGTGGAATTAATTTCACTGCAGCAATATGCATTCACAAATGGGTATCTGGA GTTGATCAATCAATGTGCTCAGGTTGCCGTCAGCCATTCAACTTGAGGAGAAAACGCCAT AATTGCTACAACTGTGCTCTAGTATTTTGTCATTCCTGCAGCAGTAAAAAATCTCTGAAG GCTTCATTAGCGCCTAATGGAAACAAGCCTTACCGTGTCTGCGATACCTGCTACAGCAAA CTGACAAAGGGACTTGAGACAGATATGCATTTTTCAGCGAAACGGGCTGCTACCGTACCA GGATTCAGTGATACAATTGAGGAGGATCTGGAAACAAGGTCAAATGCTCAACTATCAAGG TTGTCGTCAATGGAATCTTTTAAGCATTTGGATAGCAGATATTCCAAGAAAAACAAGAAG TTTGAATTTAATAGCACCCGTGTTTCCCCTGTGCCCAATGGGAGTTCACATTGGAGTGGA CTAAACATTTCAAGATCTTTCAATCCTGTATTTGGATCTTCAAAGAAGTTTTTCTCAGCA TCAGTTCCTGGATCAAGAATTGTTTCTAGGGCAACATCACCTATTTCAAGAAGAACAAGC CCTCCACGATCTACAACACCAACACCTACTCTGGGTGGCCTAACGTCTCCCAGAGTTCCC ACTGACGGCAAGCCAACAAATGATGCATTAAGCCAAGAGGTTCTGAATTTGAGATCTCAG GTACACATTTTGATGCTATTTGATTGA

Peptide Sequence

PEP ID	Zm00001d042074_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:3:149691865:149700456:1 gene:Zm00001d042074 transcript:Zm00001d042074_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Sequence	MLYAVPPRGFFPSDSNAGSVHSMSSGQSDNTNGHSRGVPMDAFRVSYSSAVSSSSHGSGH DDGDALGDVFIWGEGTGEGILGGGGSRVGSSSGAKMDCLVPKPLEFAVRLDVQNISCGGR HAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLS GDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFT FGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMSVNSNSSNCSSG KIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSA VYGQLGNAQADGMLPVRVEGKLYKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG DTEDKNTPTLVEALKDKQVRNVVCGINFTAAICIHKWVSGVDQSMCSGCRQPFNLRRKRH NCYNCALVFCHSCSSKKSLKASLAPNGNKPYRVCDTCYSKLTKGLETDMHFSAKRAATVP GFSDTIEEDLETRSNAQLSRLSSMESFKHLDSRYSKKNKKFEFNSTRVSPVPNGSSHWSG LNISRSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRTSPPRSTTPTPTLGGLTSPRVP TDGKPTNDALSQEVLNLRSQVHILMLFD

Transcript Sequence

Transcript ID	Zm00001d042074_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:149691865:149700456:1 gene:Zm00001d042074 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Sequence	TATCCAGGATAATTCCTGGGCAAAGGACTGCAATTTTTCAGAGGTATCCACGGCCTGAGA AGGAATGCCAGTCTTTTTCTCTAATTTCACATGATAGGTCATTGGATATAATATGCAAAG ATAAAGATGAAGCTGAAGTATGGTTCGCTGGGCTGAAAACACTGATTTCACGTTGTCACC AAAGAAAATGGAGAACTGAATCTAGAAGTGATATCCTTTCCTCTGGTGCAACTAGTCCGA GGACTTACACACGACGGAGTTCTCCTTTGAGTTCACCTTTCAGCAGCAATGACAGCATCC ACAAGGATGGCAGTGACAACTACCGACTCCGTACTCCATATGGGAGCCCTCCAAAGAATG GATTGGAGAAGGCATTTTCTGATGTCATGTTGTATGCAGTTCCTCCCAGGGGTTTCTTTC CATCAGATTCTAATGCTGGATCAGTCCATTCTATGTCTTCTGGACAATCGGATAACACAA ACGGGCACTCAAGAGGCGTCCCAATGGATGCTTTCCGAGTTAGTTATTCAAGTGCCGTTA GTTCATCTAGTCATGGTTCTGGTCATGATGATGGTGATGCTTTAGGCGATGTTTTCATAT GGGGAGAAGGAACTGGGGAAGGAATTCTTGGCGGTGGTGGTTCAAGAGTCGGAAGCTCCT CAGGTGCAAAAATGGACTGCCTTGTACCAAAACCATTAGAATTTGCCGTGCGACTTGATG TGCAGAACATATCTTGTGGAGGAAGGCATGCTGCACTTGTTACTAAACAAGGTGAGATAT ACTCATGGGGTGAGGAATCAGGGGGACGGCTTGGTCATGGTGTTGATTGTGATGTGTCAC AGCCAAAACTTATTGATGCTCTTTCTCATATGAACATTGAGCTTGTAGCATGTGGAGAAT ACCACACTTGTGCTGTTACACTATCTGGAGATCTTTACACATGGGGGGATGGCACATTTA AATTTGGGCTTTTGGGTCATGGAAATGATGTCAGTCACTGGGTACCCAAGCATGTGAATG GACCATTAGAGGGTATACATGTTTCGTCAATTTCATGTGGACCTTGGCATACAGCCCTAG TAACTTCCGCTGGACAGCTTTTCACATTTGGTGATGGATCTTTTGGGGTCCTGGGCCATG GAGATCGTGAGAGTATCTCGGTCCCCAGGGAAGTTGAATCTCTCAAAGGGTTACGTACGG TGCGGGCAGCTTGTGGTGTTTGGCACACTGCTGCAGTTGTAGAAGTAATGTCTGTGAATT CAAATTCTAGCAATTGTTCTTCTGGTAAGATATTTACATGGGGTGATGGTGATAAAGGTC GCTTAGGTCATGGTGACAAGGAACCAAAACTTGTCCCAACTTGTGTGGCTGCTTTGGTGG AGCCCAATTTTTGTCAGGTTGCTTGTGGGCATTGCTTGACAGTAGCCCTAACAACTTCTG GGCATGTGTATACAATGGGCAGTGCTGTCTATGGTCAACTTGGGAATGCACAAGCTGATG GCATGCTTCCTGTGCGTGTTGAAGGCAAGCTATACAAAAACTTTGTGGAGGAGATTTCAT GTGGTGCTTATCATGTGGCTGTATTGACTTCTAGGACTGAGGTGTACACATGGGGAAAAG GTGCAAATGGCCGGTTAGGTCATGGCGATACTGAGGATAAGAATACTCCTACATTGGTTG AAGCACTGAAAGATAAACAAGTCAGAAATGTTGTTTGTGGAATTAATTTCACTGCAGCAA TATGCATTCACAAATGGGTATCTGGAGTTGATCAATCAATGTGCTCAGGTTGCCGTCAGC CATTCAACTTGAGGAGAAAACGCCATAATTGCTACAACTGTGCTCTAGTATTTTGTCATT CCTGCAGCAGTAAAAAATCTCTGAAGGCTTCATTAGCGCCTAATGGAAACAAGCCTTACC GTGTCTGCGATACCTGCTACAGCAAACTGACAAAGGGACTTGAGACAGATATGCATTTTT CAGCGAAACGGGCTGCTACCGTACCAGGATTCAGTGATACAATTGAGGAGGATCTGGAAA CAAGGTCAAATGCTCAACTATCAAGGTTGTCGTCAATGGAATCTTTTAAGCATTTGGATA GCAGATATTCCAAGAAAAACAAGAAGTTTGAATTTAATAGCACCCGTGTTTCCCCTGTGC CCAATGGGAGTTCACATTGGAGTGGACTAAACATTTCAAGATCTTTCAATCCTGTATTTG GATCTTCAAAGAAGTTTTTCTCAGCATCAGTTCCTGGATCAAGAATTGTTTCTAGGGCAA CATCACCTATTTCAAGAAGAACAAGCCCTCCACGATCTACAACACCAACACCTACTCTGG GTGGCCTAACGTCTCCCAGAGTTCCCACTGACGGCAAGCCAACAAATGATGCATTAAGCC AAGAGGTTCTGAATTTGAGATCTCAGGTACACATTTTGATGCTATTTGATTGATATGTTG ATATTTGTATTTTGCTTTCAGTAGTTGCAATTTAAATATAGTGGAGTTTAGCTGAAAATG TGCTCGATTTCCAGCATAAGACAGCAGTGTTTTTTGTGTTGCTACACTGAACTTTCGATT TTAAGTTCTGAAAGATAGCTTACAATTTTTTTTTGGTTCTGCTTGCCCCCTGCAACCTTG TGTTGTAGATATATACCATTTTGTTCTGTAACAGTAACAGAGTATGGATAATGGAAATTC ATTAAAATTTAGTAAATTGTTGTCTGCCTATTTGATACTATATGGCGCACCAACTGCCCA TGAAAATTTAGAGTTTCAAGATTTGAACCTCACTTTTCCTCAAAGCTAAGTATAACCAGG ATGAGAGGACTTGCTGCTCATGTTAGCTCTTGACTTAACAGGTGGAGAGTCTTACCAGGA AGTCTCAACTCCTGGAGTTGGAGCTGGAAAGAACTACCAAACAATTGAAGGAAGCTATTT CCATTGCCGGCGAGGAAACTGCAAAGTGCAAGGCGGCAAAGGAAGTAATCAAGTCACTCA CTGCACAGTTGAAGGGGATGGCAGAGAGATTACCTGGAGGAGCAGCCAAGAACACTAAGT TGCCACCTCTTCCTGGAATTTCCATTCCAAGTGACATCTCGTCTTTGGCTATGGAGAGTG TGGGCAGCCCAAGCAGCTCCGGAGAACAAATCATAAATGGTCATAATGGATTGCTTGCGT CTAATGGACCAAGTTCTGTTAGGAATAAGACAAGCCATCCAGAAGTGGGTAAGAATGGAA GTAGGCCGCCTGATGCTGAATCTTGCCATGATGCTGAATGGGTAGAGCAAGATGAACCAG GTGTTTACATTACTCTCACCGCGTTGCCTGGAGGCGCCAGAGATCTCAAGCGGGTTCGGT TCAGCCGGAAGAGATTCAGCGAGACACAAGCAGAACAGTGGTGGCAGGAGAACCGGGCGA GGGTATACCAGCAGTACAATGTCCGCGTGGTTGACAAATCAACGGCCAGTGCCGACAATG ACATTGCAGCTAACTGACACTAGACTGACCTGGAGAAACATACCTGATTACAAGTGGAGC TGAGGCCATGTACCCTACCTACGTGAAGGCTCTCTAGTCAGTCAAGCTGGGTTGCTAACG TGGCTACCATTTTACCTAGGTGGTTTTCGCTCCCAGGAAAACAGGAGGTTTTTTTAATCC GGTTTTACATAATTCTTTCTCTTACTCCCTTCTCTTTTCTCCTTGTGTGGAAAGTAGAGT GCTTGAGCAGAGGTAATGTAAATGCTTAGTAGAAGCAGGCTAATCTACCTTGTAAATGCA TAAGCAAGCATCGATTTTAGAATGTCTTGGAAATTTTCTGATATGGTTGCAAATGGCAAA TCTGGGCTAAGTGGTGATGGT