Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042058_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:149049792:149057157:1 gene:Zm00001d042058 gene_biotype:protein_coding transcript_biotype:protein_coding description:SART-1 family protein DOT2
Sequence	ATGTCGTCTGCTGCTGCGGTGGACGAGATGGAGCTGGACGGCATTGAGCGGCACCGGGAT AAGGAGAGGAGGGAGAGGCATAGGAGGGAGGAGAAGGATCACAATGGCAGTGGAAGAAGG GACAGGGAGAAAGAGAAGGACGACCGGAGAAGGGACAAGGATGATGGCAAGCATAGGGAT AGGGATAGAGATAGGGAGAGAGACAGGGATAAGGATAGCAAGTACAGAGACCGGGATAAG GAGCCAGAGCGTGAACGTAACCGTGACCGTGACCGGGGCAAAGATCGGGAGCGGGAACCA GATCGGCAGCGTGACAAGGACCGTAGCAAAGACCGGGATAAAGAAGCAGAGCGTGATAAG GAAAGGGAGCGGAGGGACAGGGATAAGGAGAGAAGCCGCAATAGAGACAAGGACAAGGAT AGGACGCAGAGGGAGGATAGGGATCACGAGAAGTCAAGGGTGAAGGGTCGTGGAGAAGAC GAAGCAGATTTATCCAAGGGCGACAAGGGGGTTCAGAAGCAGAGAGTTGATGCCTCAGGG GATGCTGAGCAGCCCGCAGCAGATGAGCTCAGAGAGCGCATTGCAAGGGCAAAGGAGGAA AGATTGAAGGAGAAAAAGGAAGGAGGGATACTGGATGGTAATGACGGGGCTTCTGAGATA CTGTCTTGGGTGGGAAAGAGTCGTAAACTTGATGAAAAAAGACAAGCTGAAAAGGAGAAA GCATTACGTCTTGCACGAGCACTGGAAGAACAGGATAATATCTTGGCAGAAAATGGCGAT GACGATGATGACGATAAAGAGGAAGATACACAAGTGGGAGATCACTTATCTGGTGTCAAG GTGCTTCATGGCCTTGATAAGGTTTTGGAAGGTGGTGCAGTTGTCATGACTCTCAAAGAT CAGAGTATTCTTGCCAATGGGGATATCAATGAAGACGCTGACATGCTTGAGAACATTGAG ATTGGTGAGCAGAAACAAAGAGATGAAGCTTATAAGGCTTCAAAGAAGAAAGGAACTTAT GATGACAAGTTCAACAATGATTCATCGTCAAAAAAGTCGATACTGTCACATTATGATGAC CAAATGGAAGATGAGGGCGTGACCCTTGATGAAGGTGGACGTTTCACTGGTGAAGCAGAA AAGAAGCTGGAAGAGCTTCGGAAAAGGATTGAAGGTGGTTATGTTCAGAAAAAGACAGAA GACCTTACTTCCACCACAAAGATATCAACAGACTATTTTACCCCTGATGAAATGCTTAAA TTTAAAAAACCAAAGAAAAAGAAATCCCTGAGGAAGAAGGAGAAGCTGGATCTGGATGCA CTTGAGGCAGAAGCAATTGCTTCTGGATTGGGGGCCGCTGATCGTGGGTCGAGGAATGAT GGAAAGAGACAGTCTGCTAGGGAGGAAGAACAAGCGGCTGATGCTGAAAAGAGAAGCAGT GGTTATCAAACTGCCATTGCAAAGGCTGAAGAGGCATCAAGAGCATTGCGCGGGGAGAAA ACTGCACCTGCTAAACCAGCTGAAGAACTTGTTTTCGGTGATGATTATGAAGATCTGCAG AAATCTCTAGAGCAAGCAAGAAAGTTGGCCCTAAGGAAGCAGGAAGAGGCTTCAGCTTCT GGTCCTCGTTCCATAGTCGAACTGGCTACTGCAACCAAGAGCCAAGAGGAAACAGAAGCC ACAGAAGGAGATTCAGAACAGAATAAGGTTGTTATCACAGAGATGGAGGAATTTGTGTGG GGACTGCAATTGAATCAAGGAACACGCAAGCCAGAAGACGATGTGTTTATGGATGAAGAT GATGATGCCATGCCTTCAGATAATGTTGCAAAAGATGACACTAATGGGTTGGCAGAGATG GAAGAGGATGCTCTGACAGAAATACCAGCCAAGGTCGAAGAGGATGAAGTCAAACCAGAT GAGGTTATACATGAAGTTGCAGTAGGAAAGGGTTTAGCTGGTGCTTTAAAGATTCTTAAG GAGCGAGGAAGCCTCAACGAGGGAACAGATTGGGGAGGCAGAACAACAGACAAGAAAAAG AGCAAGCTTATAGGTGTCGAGGATGGACCTAAAGACATTCGCATTGAAAGAATAGATGAA TTTGGCAGAGTGATGACACCTAAGGAGGCATTCCGTCATCTTTCGCACAAGTTTCATGGC AAGGGGCCTGGTAAAATGAAACAAGAAAAACGCCAGAAGAAATATCATGATGAGCTGAAA ACCAAGCATATGAAATCTTCTGACACACCATTATTGGCCGCGGAAAAGATGAGAGAGGCT CAATCTCGTAATCAAACACCATACCTCATTTTAAGTGGCAATGCAAAAACAGGTCAAACA AGTGATAGCGGCGGCTATGCTACCTTGGAGACAGAGCAACCTGGGAGCCTAACGCCCATG CTTGGGGACAAAAAGGTCGAGCATTTTTTGGGCATCAAACGAAGTGCCAAGCCTGGAAGC TTACCTCCTCCAGTCCCAAAGAAACCGAAGAACTGA

Peptide Sequence

PEP ID	Zm00001d042058_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:149049792:149057157:1 gene:Zm00001d042058 transcript:Zm00001d042058_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:SART-1 family protein DOT2
Sequence	MSSAAAVDEMELDGIERHRDKERRERHRREEKDHNGSGRRDREKEKDDRRRDKDDGKHRD RDRDRERDRDKDSKYRDRDKEPERERNRDRDRGKDREREPDRQRDKDRSKDRDKEAERDK ERERRDRDKERSRNRDKDKDRTQREDRDHEKSRVKGRGEDEADLSKGDKGVQKQRVDASG DAEQPAADELRERIARAKEERLKEKKEGGILDGNDGASEILSWVGKSRKLDEKRQAEKEK ALRLARALEEQDNILAENGDDDDDDKEEDTQVGDHLSGVKVLHGLDKVLEGGAVVMTLKD QSILANGDINEDADMLENIEIGEQKQRDEAYKASKKKGTYDDKFNNDSSSKKSILSHYDD QMEDEGVTLDEGGRFTGEAEKKLEELRKRIEGGYVQKKTEDLTSTTKISTDYFTPDEMLK FKKPKKKKSLRKKEKLDLDALEAEAIASGLGAADRGSRNDGKRQSAREEEQAADAEKRSS GYQTAIAKAEEASRALRGEKTAPAKPAEELVFGDDYEDLQKSLEQARKLALRKQEEASAS GPRSIVELATATKSQEETEATEGDSEQNKVVITEMEEFVWGLQLNQGTRKPEDDVFMDED DDAMPSDNVAKDDTNGLAEMEEDALTEIPAKVEEDEVKPDEVIHEVAVGKGLAGALKILK ERGSLNEGTDWGGRTTDKKKSKLIGVEDGPKDIRIERIDEFGRVMTPKEAFRHLSHKFHG KGPGKMKQEKRQKKYHDELKTKHMKSSDTPLLAAEKMREAQSRNQTPYLILSGNAKTGQT SDSGGYATLETEQPGSLTPMLGDKKVEHFLGIKRSAKPGSLPPPVPKKPKN

Transcript Sequence

Transcript ID	Zm00001d042058_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:149049792:149057157:1 gene:Zm00001d042058 gene_biotype:protein_coding transcript_biotype:protein_coding description:SART-1 family protein DOT2
Sequence	ATCTCTGCTTCGAACGTTCACGGAGACACGAGGCTGGAGGCTGCAGCGCTAACCCTAGCC GGCGTCGGCGGTGGCGGCCAGCGGGGCGCAGGGCGCGACCTCGGCGCGGTGGGCGCGGGC GCACCGCTGAGCAGGCTGTAGGGGGAGGTGGGATTGGATTTTTTTTGACGTGGAAGTTGG AATACTCAAGTTGGAAATTCTGCTCCTCCACTGCCGCCGCCGCTCGCCACGTGCTCGGGT CTAGACTCGTCGGTTTATTCGCCAGGTCTTCGTTGTGCCCTTCGCCGGCGACCAGCACGC ACCAGTTACTGGGTCACGCATGTCGTCTGCTGCTGCGGTGGACGAGATGGAGCTGGACGG CATTGAGCGGCACCGGGATAAGGAGAGGAGGGAGAGGCATAGGAGGGAGGAGAAGGATCA CAATGGCAGTGGAAGAAGGGACAGGGAGAAAGAGAAGGACGACCGGAGAAGGGACAAGGA TGATGGCAAGCATAGGGATAGGGATAGAGATAGGGAGAGAGACAGGGATAAGGATAGCAA GTACAGAGACCGGGATAAGGAGCCAGAGCGTGAACGTAACCGTGACCGTGACCGGGGCAA AGATCGGGAGCGGGAACCAGATCGGCAGCGTGACAAGGACCGTAGCAAAGACCGGGATAA AGAAGCAGAGCGTGATAAGGAAAGGGAGCGGAGGGACAGGGATAAGGAGAGAAGCCGCAA TAGAGACAAGGACAAGGATAGGACGCAGAGGGAGGATAGGGATCACGAGAAGTCAAGGGT GAAGGGTCGTGGAGAAGACGAAGCAGATTTATCCAAGGGCGACAAGGGGGTTCAGAAGCA GAGAGTTGATGCCTCAGGGGATGCTGAGCAGCCCGCAGCAGATGAGCTCAGAGAGCGCAT TGCAAGGGCAAAGGAGGAAAGATTGAAGGAGAAAAAGGAAGGAGGGATACTGGATGGTAA TGACGGGGCTTCTGAGATACTGTCTTGGGTGGGAAAGAGTCGTAAACTTGATGAAAAAAG ACAAGCTGAAAAGGAGAAAGCATTACGTCTTGCACGAGCACTGGAAGAACAGGATAATAT CTTGGCAGAAAATGGCGATGACGATGATGACGATAAAGAGGAAGATACACAAGTGGGAGA TCACTTATCTGGTGTCAAGGTGCTTCATGGCCTTGATAAGGTTTTGGAAGGTGGTGCAGT TGTCATGACTCTCAAAGATCAGAGTATTCTTGCCAATGGGGATATCAATGAAGACGCTGA CATGCTTGAGAACATTGAGATTGGTGAGCAGAAACAAAGAGATGAAGCTTATAAGGCTTC AAAGAAGAAAGGAACTTATGATGACAAGTTCAACAATGATTCATCGTCAAAAAAGTCGAT ACTGTCACATTATGATGACCAAATGGAAGATGAGGGCGTGACCCTTGATGAAGGTGGACG TTTCACTGGTGAAGCAGAAAAGAAGCTGGAAGAGCTTCGGAAAAGGATTGAAGGTGGTTA TGTTCAGAAAAAGACAGAAGACCTTACTTCCACCACAAAGATATCAACAGACTATTTTAC CCCTGATGAAATGCTTAAATTTAAAAAACCAAAGAAAAAGAAATCCCTGAGGAAGAAGGA GAAGCTGGATCTGGATGCACTTGAGGCAGAAGCAATTGCTTCTGGATTGGGGGCCGCTGA TCGTGGGTCGAGGAATGATGGAAAGAGACAGTCTGCTAGGGAGGAAGAACAAGCGGCTGA TGCTGAAAAGAGAAGCAGTGGTTATCAAACTGCCATTGCAAAGGCTGAAGAGGCATCAAG AGCATTGCGCGGGGAGAAAACTGCACCTGCTAAACCAGCTGAAGAACTTGTTTTCGGTGA TGATTATGAAGATCTGCAGAAATCTCTAGAGCAAGCAAGAAAGTTGGCCCTAAGGAAGCA GGAAGAGGCTTCAGCTTCTGGTCCTCGTTCCATAGTCGAACTGGCTACTGCAACCAAGAG CCAAGAGGAAACAGAAGCCACAGAAGGAGATTCAGAACAGAATAAGGTTGTTATCACAGA GATGGAGGAATTTGTGTGGGGACTGCAATTGAATCAAGGAACACGCAAGCCAGAAGACGA TGTGTTTATGGATGAAGATGATGATGCCATGCCTTCAGATAATGTTGCAAAAGATGACAC TAATGGGTTGGCAGAGATGGAAGAGGATGCTCTGACAGAAATACCAGCCAAGGTCGAAGA GGATGAAGTCAAACCAGATGAGGTTATACATGAAGTTGCAGTAGGAAAGGGTTTAGCTGG TGCTTTAAAGATTCTTAAGGAGCGAGGAAGCCTCAACGAGGGAACAGATTGGGGAGGCAG AACAACAGACAAGAAAAAGAGCAAGCTTATAGGTGTCGAGGATGGACCTAAAGACATTCG CATTGAAAGAATAGATGAATTTGGCAGAGTGATGACACCTAAGGAGGCATTCCGTCATCT TTCGCACAAGTTTCATGGCAAGGGGCCTGGTAAAATGAAACAAGAAAAACGCCAGAAGAA ATATCATGATGAGCTGAAAACCAAGCATATGAAATCTTCTGACACACCATTATTGGCCGC GGAAAAGATGAGAGAGGCTCAATCTCGTAATCAAACACCATACCTCATTTTAAGTGGCAA TGCAAAAACAGGTCAAACAAGTGATAGCGGCGGCTATGCTACCTTGGAGACAGAGCAACC TGGGAGCCTAACGCCCATGCTTGGGGACAAAAAGGTCGAGCATTTTTTGGGCATCAAACG AAGTGCCAAGCCTGGAAGCTTACCTCCTCCAGTCCCAAAGAAACCGAAGAACTGAACCTG GTGGTAGCACTCAGCCAACGAAGCAGGCTACAACGCATTTACTGTGAGCAGCAATCAGCC CACAAGCTTCCACGGCTCAACCCCCCGCCGCCGCACTAGAAATGCAATATCCTCTGTATT TCTTCTAAGCTGATTACACTAACATTCTGGCATGTTCGATGGGGTTTTGTAATTCAGTGA TATACGTGTGCATCCTTGATCTGCCTTGAACATGTAAGTGATGGAACTAAATATTGTTCT AACGACACACCGTTTCCGTTTGAATAAAGTGTAGTTATGATGTGACGGTTTAAGGTTAAA GCAGCTGTGTTCAAGAGCTACATTCGTTCTGAAAATGGTGCGGTTTTAG