Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042040_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:3:148150464:148156394:-1 gene:Zm00001d042040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/arginine-rich splicing factor SR45
Sequence	ATGGCGAAGCCTCGGCGCGGCCGCTCCGCGTCTCGCTCCTCCTCGGGATCTTCTTCCCGC TCGCTGTCCCACTCCGTCTCCTCCGGCTCTGTCTCGTCCCGCTCCCGGTCGCGCTCCCGC TCCTTCTCGTCGTCGTCCTCCCAGTCCCGGAGCCGCTCCCCTCCTCAGGCTAAGCGCAGT TCGCCTGGAGCACGGAAAGGGCGATCACCTTCACCGCCCCCTAAAAAGGGTTCACCTTCA AAGAAAGTCCGTTCGCCATCACCACCACTTAAAAAGGCTTCACCCCCTAGGAAAGTGTCG CCTCCTGCTGAATCAGCTGTTCTCTGCATTGATCATTTATCAAGGAATGTTAATGAGGCT CACTTGAAAGAGATATTTGGAAACTTTGGCGAAGTGGTGAATGTGGAGCTATCAATGGAC CGAATGGTTAACCTTCCTCGTGGCTATGGATATATTGAATTCAAGAAGAGAGCTGATGCT GAGAAGGCTCTTCTTCACATGGATGGTGGTCAAATTGATGGAAATATTGTTAAGTTGAGA TTCACTCTTCAACCACGCCAAAGGGCTGCATCACCTGTAAAAGCTCCGCCCCCTCCTCCA AAAAGAGATGCTCTTCAGATTGAAAAAGGTGTTAGCAGTGCTGAAAAGGATGCCCAGCAG CGTCCTAAGGAATCATCTCCACGAAGGAAACCAGCTTCACCTCTACGGAAACGATCTCCA AATCGAAGGGCTGAATCACCCAGGCGTCCACCTGACCCATCACCTAGGCGCCGTCCTGAT TCTCCACCTATACGTCGCCGACCAGATCCTTCTCCTGTCAGACGTGGTGACACACCTCGC AGGAGACCACCATCTCCAGTTCGAAGGCGTTCTCCTTCTCCACCACCTAGGAGGCATAGG TCACCGATGCGTCTTTCACCTAGGAGGGGGCGTGGTAGCCCATCACCACGCAGGCGCTCC CCTGGGCCTCTTAGGCGGCGCTCACCACCTCCAAGGCGGTTGAGGAGCCCACCAAGAAGG CCACCACCTCCACGTCGCTTCAGTCGCTCTCCTCCTCGCCGACCCCTTCGCTCCCGCTCC AGATCAATTTCTCCAAGAAGGGGACGAGGGCCTCCATTGAGGCGTGGTAGGTCAGACTCA TCATATTCTCGATCACCTACTCCACCACCAAGAAAGGTGAGTGCTACAACTAATATGTAT TTTTGTAGCATCAAACACAAAGTAATGCTGTTTTCTTTGCTTCTATTGCTGGTCATGCCT TGTAATATTGATTTACTAAGTGCTTAA

Peptide Sequence

PEP ID	Zm00001d042040_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:3:148150464:148156394:-1 gene:Zm00001d042040 transcript:Zm00001d042040_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/arginine-rich splicing factor SR45
Sequence	MAKPRRGRSASRSSSGSSSRSLSHSVSSGSVSSRSRSRSRSFSSSSSQSRSRSPPQAKRS SPGARKGRSPSPPPKKGSPSKKVRSPSPPLKKASPPRKVSPPAESAVLCIDHLSRNVNEA HLKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRADAEKALLHMDGGQIDGNIVKLR FTLQPRQRAASPVKAPPPPPKRDALQIEKGVSSAEKDAQQRPKESSPRRKPASPLRKRSP NRRAESPRRPPDPSPRRRPDSPPIRRRPDPSPVRRGDTPRRRPPSPVRRRSPSPPPRRHR SPMRLSPRRGRGSPSPRRRSPGPLRRRSPPPRRLRSPPRRPPPPRRFSRSPPRRPLRSRS RSISPRRGRGPPLRRGRSDSSYSRSPTPPPRKVSATTNMYFCSIKHKVMLFSLLLLLVMP CNIDLLSA

Transcript Sequence

Transcript ID	Zm00001d042040_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:148150464:148156394:-1 gene:Zm00001d042040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/arginine-rich splicing factor SR45
Sequence	AGACACGGGTGGGTTGAGTTGGAGTGTGGATGGAACCATACACTCTATCTCTTCCTTCTC CCAACCCCGCTCAAAACCCTAGCTCAACGCCACAGGCTCGCCGACTTTCGCCCGGCCGCC GCCGGGGACGATGGCGAAGCCTCGGCGCGGCCGCTCCGCGTCTCGCTCCTCCTCGGGATC TTCTTCCCGCTCGCTGTCCCACTCCGTCTCCTCCGGCTCTGTCTCGTCCCGCTCCCGGTC GCGCTCCCGCTCCTTCTCGTCGTCGTCCTCCCAGTCCCGGAGCCGCTCCCCTCCTCAGGC TAAGCGCAGTTCGCCTGGAGCACGGAAAGGGCGATCACCTTCACCGCCCCCTAAAAAGGG TTCACCTTCAAAGAAAGTCCGTTCGCCATCACCACCACTTAAAAAGGCTTCACCCCCTAG GAAAGTGTCGCCTCCTGCTGAATCAGCTGTTCTCTGCATTGATCATTTATCAAGGAATGT TAATGAGGCTCACTTGAAAGAGATATTTGGAAACTTTGGCGAAGTGGTGAATGTGGAGCT ATCAATGGACCGAATGGTTAACCTTCCTCGTGGCTATGGATATATTGAATTCAAGAAGAG AGCTGATGCTGAGAAGGCTCTTCTTCACATGGATGGTGGTCAAATTGATGGAAATATTGT TAAGTTGAGATTCACTCTTCAACCACGCCAAAGGGCTGCATCACCTGTAAAAGCTCCGCC CCCTCCTCCAAAAAGAGATGCTCTTCAGATTGAAAAAGGTGTTAGCAGTGCTGAAAAGGA TGCCCAGCAGCGTCCTAAGGAATCATCTCCACGAAGGAAACCAGCTTCACCTCTACGGAA ACGATCTCCAAATCGAAGGGCTGAATCACCCAGGCGTCCACCTGACCCATCACCTAGGCG CCGTCCTGATTCTCCACCTATACGTCGCCGACCAGATCCTTCTCCTGTCAGACGTGGTGA CACACCTCGCAGGAGACCACCATCTCCAGTTCGAAGGCGTTCTCCTTCTCCACCACCTAG GAGGCATAGGTCACCGATGCGTCTTTCACCTAGGAGGGGGCGTGGTAGCCCATCACCACG CAGGCGCTCCCCTGGGCCTCTTAGGCGGCGCTCACCACCTCCAAGGCGGTTGAGGAGCCC ACCAAGAAGGCCACCACCTCCACGTCGCTTCAGTCGCTCTCCTCCTCGCCGACCCCTTCG CTCCCGCTCCAGATCAATTTCTCCAAGAAGGGGACGAGGGCCTCCATTGAGGCGTGGTAG GTCAGACTCATCATATTCTCGATCACCTACTCCACCACCAAGAAAGGTGAGTGCTACAAC TAATATGTATTTTTGTAGCATCAAACACAAAGTAATGCTGTTTTCTTTGCTTCTATTGCT GGTCATGCCTTGTAATATTGATTTACTAAGTGCTTAAACATGTTTCTTGTATAGGGGCCA AGGAGGGTATCAAGGAGCCGCAGCCCTAGAAAGTAACATATATGTATTTGTTTTGTAATA CTCCCTCCGTCCTAAGATATAGTTCCTTTTGGCACTCTTTTTTTCCGTCCACATTCATCC GAATGATAATGAACGTAGACATAAATACAAACTACATTTGTAGATTAATTAATTAATGTT TGTTTAGTCAAACGAATTATATTTTGGGATGGAGTATGTTTTTTCTGGTGTTTTTGAATA TACCAAGAGTATTCCATCCATAACTGAAAATATCTCCCGTTTGCAGGCCTCCTAGAGCAG GAAGAAGCGTCTCCAGTGACAGCCGCAGCAGCAGTTCACCTTCCCCTAGACGCGGCAGGT AGAAAGAACCCGTGGCATTGTGTATGCGGCAGGTAAAGCCTTTTATCCCTTGACTCTATC TGTATCGTTTGCCTGTGCTTGTGACTTGCTGTGAGTTCAAGTATTGGTTCGAGGAGAAGA TGAGAGAACGCTACAGCAATGCTCCAAACGGATCTGCTCAACATGCCTGGTCGACCGCCC TAGTTTGTGTGGTCTACCCTAGACAGAATTATCTGCTGTGTTGGCTTGTGTACTTTGATT GTACCCCAAGTATTTTGAAGTTCTGAACTTATTTCTGCTAATTGGTGTCTGAAGTGGATA TGTTGAATGTATTTTGTTTTGTTGGATAGAGTTCCTCAGCATTGCCACCGTATGAAAGAT GAATCTATTGATC