Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042024_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:147723706:147727901:1 gene:Zm00001d042024 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGACGGCCTGGAGGAGCCGCCGCCCGCGGGGAGCGCGGCCGCCAACGCCAGCTCC
ACCTCCGGCGGCGGCAGCGGCGGGAGCAAGGGGTCCCCGTGCGAGGAGTGTGGGGAGCAG
CCGTGGAAGTACCGGTGCCCCGGGTGCGGCCGCCTCACCTGCAGCCTCCCCTGCGTGCAG
GCCCACAAGCGCCGTACCGCCTGCACGGGCAAGCGCCCACGCACGGACCCCGTCCCGCTC
GCCCGATTCGACGACAACCAGCTCATATCCGATTACAACTTGCTGGAGGAGGTGAAGCAG
GCCCACGATTCCGCGCACAGGCTCATCGGCGGCTTCGGCCGCAACTACGGGGGACGGGGA
TCAGGCGGCGCCCAGCTGCCCAGATGGCTGTTCTACCTCAGCAAGGCGGCGCACCGCCGT
GGTGTCAAGCTCTGCTTTCTCCCCAGGGGCATGGCCAGGAGAGAGCAGAATCGATCGCAA
CACAATTACAGGAAGGATTGCATATTCTGGACACTTGAGTGGAAATTCAATTCAACTGAT
GTTGTCCTAACTGATCATGGGATAGATGAGCACACAACCTTGCTCTCTCTATTGGAAAAA
CATCTTATTCCTGGCCCTTGGAAAGATCAGCTTACACAATATCGGAACACCAAATTACAT
GATCTGAAACTGTTCATTCAAAAGTGTGCCAAGCAATCAGAGTCACCGTACCGCCTACTC
AATATAGAAGAGCCATTGCGCCCACAGCTGAGGGGTATACTTGTTGTGGAGTACCCAACT
ATCAATGTATTTCTTCCGTCAGACAATTGTGACTTTGAAATGGAGAAAATGGTGAACAGA
CTTCCTAAAGATGGAAAAGGCCCTGGCAGCATGACTGACGAGCCACCTGTAGAGGGCAGC
AAGTTTCATGAGGAGGAAATAGAGGAAGGCGAACTTTCACCTGAAACTGAGATTATAGAT
CTCAAGGACCATGGAACTTCAAATGCCTGCAAAATTTCTCCAGCAGATGTTACAAGTGAA
TCAAAGATAGTTAACAATGTCGATTCTTCTGTGCTCTCATACCCCGGTTGTCAAGCTCAA
GCATTACATGGTCAGCCGAAAGGACTGAATCAATATAGCAAGATATCACCAAATGGTACC
TCTGGGCCTGCAGAAACTAAATCCCGCATGGAAGTCTGTCCTCTGGATATGGAGAAGACA
AGGGAAAGCGGGTTGTCCTCAGAGGGACGCGTTGTAGATCTGAAGGGGTATGGAATTTCA
TATCCTGTCAGCACTGCAGAGGCAGGAGGTGCAGCTCTATCGAAGATAGACACCAAGGCA
ACATATCCCTTAGTACCATCTTCCACCAGCATTGTAGTATCTGATGGCGCGACGGGTCCT
CAGCTGGAACACAGTCAGCAAAACAAACGGACGCCAAGCTCGACTCCTGAAGCGCTGAAA
AGGAAATCTTGCATGAAAGTTTATCCGCTGGACATTGACGAGGGATTGTTCCCCGAGGTA
CCCGACTTGGCCTTTGAGCAAGAGATGTTGGATACCTACCCAGAGCTCTTCGAGAACATG
GATGTCGATGACTTCTTAAGCTGCGATTTTGCAATGGTGAACAGGGACGAACCAGTAGAT
GCAACGTCTGGGTTACCGAGGGACGACTTGGAGGAAGGGGAGATTCCAACATTGTGA

Peptide Sequence

PEP ID

Zm00001d042024_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:147723706:147727901:1 gene:Zm00001d042024 transcript:Zm00001d042024_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEDGLEEPPPAGSAAANASSTSGGGSGGSKGSPCEECGEQPWKYRCPGCGRLTCSLPCVQ
AHKRRTACTGKRPRTDPVPLARFDDNQLISDYNLLEEVKQAHDSAHRLIGGFGRNYGGRG
SGGAQLPRWLFYLSKAAHRRGVKLCFLPRGMARREQNRSQHNYRKDCIFWTLEWKFNSTD
VVLTDHGIDEHTTLLSLLEKHLIPGPWKDQLTQYRNTKLHDLKLFIQKCAKQSESPYRLL
NIEEPLRPQLRGILVVEYPTINVFLPSDNCDFEMEKMVNRLPKDGKGPGSMTDEPPVEGS
KFHEEEIEEGELSPETEIIDLKDHGTSNACKISPADVTSESKIVNNVDSSVLSYPGCQAQ
ALHGQPKGLNQYSKISPNGTSGPAETKSRMEVCPLDMEKTRESGLSSEGRVVDLKGYGIS
YPVSTAEAGGAALSKIDTKATYPLVPSSTSIVVSDGATGPQLEHSQQNKRTPSSTPEALK
RKSCMKVYPLDIDEGLFPEVPDLAFEQEMLDTYPELFENMDVDDFLSCDFAMVNRDEPVD
ATSGLPRDDLEEGEIPTL

Transcript Sequence

Transcript ID

Zm00001d042024_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:147723706:147727901:1 gene:Zm00001d042024 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGCGCTGATAAACCTCCAGTTAAACCCTAGTATCTCCCCGCGTCGCCGCACACATCGCCC
GTTCGCACGCGCCGTCCCCCTGGAGGATCGAGCCACCCTCCTCACCTGGAATGGAGGACG
GCCTGGAGGAGCCGCCGCCCGCGGGGAGCGCGGCCGCCAACGCCAGCTCCACCTCCGGCG
GCGGCAGCGGCGGGAGCAAGGGGTCCCCGTGCGAGGAGTGTGGGGAGCAGCCGTGGAAGT
ACCGGTGCCCCGGGTGCGGCCGCCTCACCTGCAGCCTCCCCTGCGTGCAGGCCCACAAGC
GCCGTACCGCCTGCACGGGCAAGCGCCCACGCACGGACCCCGTCCCGCTCGCCCGATTCG
ACGACAACCAGCTCATATCCGATTACAACTTGCTGGAGGAGGTGAAGCAGGCCCACGATT
CCGCGCACAGGCTCATCGGCGGCTTCGGCCGCAACTACGGGGGACGGGGATCAGGCGGCG
CCCAGCTGCCCAGATGGCTGTTCTACCTCAGCAAGGCGGCGCACCGCCGTGGTGTCAAGC
TCTGCTTTCTCCCCAGGGGCATGGCCAGGAGAGAGCAGAATCGATCGCAACACAATTACA
GGAAGGATTGCATATTCTGGACACTTGAGTGGAAATTCAATTCAACTGATGTTGTCCTAA
CTGATCATGGGATAGATGAGCACACAACCTTGCTCTCTCTATTGGAAAAACATCTTATTC
CTGGCCCTTGGAAAGATCAGCTTACACAATATCGGAACACCAAATTACATGATCTGAAAC
TGTTCATTCAAAAGTGTGCCAAGCAATCAGAGTCACCGTACCGCCTACTCAATATAGAAG
AGCCATTGCGCCCACAGCTGAGGGGTATACTTGTTGTGGAGTACCCAACTATCAATGTAT
TTCTTCCGTCAGACAATTGTGACTTTGAAATGGAGAAAATGGTGAACAGACTTCCTAAAG
ATGGAAAAGGCCCTGGCAGCATGACTGACGAGCCACCTGTAGAGGGCAGCAAGTTTCATG
AGGAGGAAATAGAGGAAGGCGAACTTTCACCTGAAACTGAGATTATAGATCTCAAGGACC
ATGGAACTTCAAATGCCTGCAAAATTTCTCCAGCAGATGTTACAAGTGAATCAAAGATAG
TTAACAATGTCGATTCTTCTGTGCTCTCATACCCCGGTTGTCAAGCTCAAGCATTACATG
GTCAGCCGAAAGGACTGAATCAATATAGCAAGATATCACCAAATGGTACCTCTGGGCCTG
CAGAAACTAAATCCCGCATGGAAGTCTGTCCTCTGGATATGGAGAAGACAAGGGAAAGCG
GGTTGTCCTCAGAGGGACGCGTTGTAGATCTGAAGGGGTATGGAATTTCATATCCTGTCA
GCACTGCAGAGGCAGGAGGTGCAGCTCTATCGAAGATAGACACCAAGGCAACATATCCCT
TAGTACCATCTTCCACCAGCATTGTAGTATCTGATGGCGCGACGGGTCCTCAGCTGGAAC
ACAGTCAGCAAAACAAACGGACGCCAAGCTCGACTCCTGAAGCGCTGAAAAGGAAATCTT
GCATGAAAGTTTATCCGCTGGACATTGACGAGGGATTGTTCCCCGAGGTACCCGACTTGG
CCTTTGAGCAAGAGATGTTGGATACCTACCCAGAGCTCTTCGAGAACATGGATGTCGATG
ACTTCTTAAGCTGCGATTTTGCAATGGTGAACAGGGACGAACCAGTAGATGCAACGTCTG
GGTTACCGAGGGACGACTTGGAGGAAGGGGAGATTCCAACATTGTGAAGGAAGAACGTGA
TGCTTCACAGGATGTTGCACTCGAGCGGAAGAGTCTGTGTCGTGCTTTTCTAGGACATGT
CATGCGACGTAATGGTAGAACACTCACATGTACCTAGCTTGTATAGCTGCAACTTGAAAC
TATGCAGCCTCTTTTATTCTTTATCGTTTTCTTTAGTCTCGCTGTTGTGTTATGTAGCTC
TGCCAGAGCAGCAAGAAATTTTGGGGTTCTAATTTTGTAAGAGATGATGGCTGTTTGGGG
ATATGGATGTCGAGGATTTCTCAAGCTGTGCAATGATGAATTGCGATGGATATC