Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041987_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:146668839:146670457:-1 gene:Zm00001d041987 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposon protein
Sequence	ATGGCTAGCAGCAGCAGTCTTGTCAAGTGCCTGGCGGTCACGGTGGCGGTGGCGCTCCTG GCGCTGTCGTCGTGTGGCGTGGTTGCCTCGGCGGCGGCGTGGAGGGGCAAGCCTCAGAAG TTGAAGCCCGGGGAGAAGCCCTCCGGCAAATCCAAGTTCTTCGCCCTCACCCCCGGAATG TTCGGCCACAAGCGCGACTACCAGGCCGCCTGCTCCGACGAGGGTGGCCCGGCATGCTAC GTGGGTTGCCCAAAGGATTGCCCTAACAAATGCCTCGTCTTCTGCGCCTACTGCCTCAGC TTCTGCATGTGTGATATCTTCCCCGGCACCTCCTGCGGCGACCCGCGCTTCACCGGCGGC GACGGCAACACCTTCTACTTCCATGGAAACAAGGACAAGGACTTCTGCCTCGTCTCCGAC GCGGGCCTCCACATCAACGCCCACTTCATCGGCAACCACAACCCGGCCCTCAACCGCGAC TTCACGTGGGTGCAGGCGCTGGGGGTCACCTTCGTCGCACCAGGCGGCGCCGGCGACCGC CACCGCCTCTACGTCGGCGCCCGCAGGGCCGCGGAGTGGGACGAGGAGGACGACCACATC CAGCTCACCTTGGACGCCGAGCCCGTCGACGTCGACGCCGTCAAGAACGCGCGCTGGGCG TCCAAGGCCCTCCCGGGGCTCTCCGTCACGCGCATGGACGCCGTCAACACCGTCATGGTG GAGCTGGACGGCGTCTTCGCCATCTCCGCCAACGCCGTGCCCATCACCGACAGGGACGAC CGGATCCACGGCTACGGCAAGACGGGCGCCGACAGCCTCGTGCACCTCGACCTGGCCTTC CAGTTCCATAACCTCACCGCGGACGTCCACGGCGTCCTGGGCCAGACCTACCGCCCTGGC TACGTCAGCAAGCTCGACATCGGCGCCAAGATGCCCGTCATGGGCGGCGCGCCCAAGTAC CTGTCCGCCGGTCTCTTCTCCACGGACTGCGCCGTCTCCCGGTTCCACTCTTTCGCCTCC GCCTAA

Peptide Sequence

PEP ID	Zm00001d041987_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:146668839:146670457:-1 gene:Zm00001d041987 transcript:Zm00001d041987_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposon protein
Sequence	MASSSSLVKCLAVTVAVALLALSSCGVVASAAAWRGKPQKLKPGEKPSGKSKFFALTPGM FGHKRDYQAACSDEGGPACYVGCPKDCPNKCLVFCAYCLSFCMCDIFPGTSCGDPRFTGG DGNTFYFHGNKDKDFCLVSDAGLHINAHFIGNHNPALNRDFTWVQALGVTFVAPGGAGDR HRLYVGARRAAEWDEEDDHIQLTLDAEPVDVDAVKNARWASKALPGLSVTRMDAVNTVMV ELDGVFAISANAVPITDRDDRIHGYGKTGADSLVHLDLAFQFHNLTADVHGVLGQTYRPG YVSKLDIGAKMPVMGGAPKYLSAGLFSTDCAVSRFHSFASA

Transcript Sequence

Transcript ID	Zm00001d041987_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:146668839:146670457:-1 gene:Zm00001d041987 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposon protein
Sequence	ACATAGTGTGTCACTTTGTCCCCTCCTACGCGACTTCCCCTCCAATTCAGGCGCTCTCTC TCTCGATCCATGCATCTCAACTCAAAGGCATTCAATTAATTAATTATACTAGCTAGCTAG GAGGAGGAGTACTCCGGCCGGCCGGCCGGCGCCCATAAGAACCTCTCGTGTTGTGTATGC ATCGATCGATCGATCGATCGATCTCCGACTCCGACGACCTCGCTATCCGCCATGGCTAGC AGCAGCAGTCTTGTCAAGTGCCTGGCGGTCACGGTGGCGGTGGCGCTCCTGGCGCTGTCG TCGTGTGGCGTGGTTGCCTCGGCGGCGGCGTGGAGGGGCAAGCCTCAGAAGTTGAAGCCC GGGGAGAAGCCCTCCGGCAAATCCAAGTTCTTCGCCCTCACCCCCGGAATGTTCGGCCAC AAGCGCGACTACCAGGCCGCCTGCTCCGACGAGGGTGGCCCGGCATGCTACGTGGGTTGC CCAAAGGATTGCCCTAACAAATGCCTCGTCTTCTGCGCCTACTGCCTCAGCTTCTGCATG TGTGATATCTTCCCCGGCACCTCCTGCGGCGACCCGCGCTTCACCGGCGGCGACGGCAAC ACCTTCTACTTCCATGGAAACAAGGACAAGGACTTCTGCCTCGTCTCCGACGCGGGCCTC CACATCAACGCCCACTTCATCGGCAACCACAACCCGGCCCTCAACCGCGACTTCACGTGG GTGCAGGCGCTGGGGGTCACCTTCGTCGCACCAGGCGGCGCCGGCGACCGCCACCGCCTC TACGTCGGCGCCCGCAGGGCCGCGGAGTGGGACGAGGAGGACGACCACATCCAGCTCACC TTGGACGCCGAGCCCGTCGACGTCGACGCCGTCAAGAACGCGCGCTGGGCGTCCAAGGCC CTCCCGGGGCTCTCCGTCACGCGCATGGACGCCGTCAACACCGTCATGGTGGAGCTGGAC GGCGTCTTCGCCATCTCCGCCAACGCCGTGCCCATCACCGACAGGGACGACCGGATCCAC GGCTACGGCAAGACGGGCGCCGACAGCCTCGTGCACCTCGACCTGGCCTTCCAGTTCCAT AACCTCACCGCGGACGTCCACGGCGTCCTGGGCCAGACCTACCGCCCTGGCTACGTCAGC AAGCTCGACATCGGCGCCAAGATGCCCGTCATGGGCGGCGCGCCCAAGTACCTGTCCGCC GGTCTCTTCTCCACGGACTGCGCCGTCTCCCGGTTCCACTCTTTCGCCTCCGCCTAATAC TAAGTCCCAAGCGCGACCGATCCTATTCCTATCCACGGCGTGAAATAAGATTTCTGTATG TAGGCTCTTATCTCATCTCATCGTATGAAAATGTACACGTGCGTTGCTGCATTGGAAGTA CGTATTGTTGCACGATCAACTGAATAACTTGCGTCTCGAAAATTTTATGCACTAGTACGT TCGCCCACATCAAATAATCAGTGTTTCTGAGTTGGTTGCTCATGAAGTTTT