Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041957_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:3:145604154:145607270:-1 gene:Zm00001d041957 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fizzy-related protein

Sequence

ATGGCGGTGGCGGCGCCGGCCTCGGACGCCAAGCCGCGCCTCAACGTGCCACCGTCCATG
GCATCCGCGCTCCGCCTCGATCCCGTGGGGCTGGGGGCGGGACCCTCTATGCCGTCCCCC
TCCCGCCGACTCGCCGAGCCTCCCAAGACGCCCTCCCCATCCAAGACCACCTACAGCGAC
CGTTTCATCCCCTGCCGCTCCTCCTCCCGCCTCCAGAACTTCGCGCTAATCGACTCCCCT
CTCTCCCCAGCCAAGGACGACACGCCCTACTCCCGCCTCCTCCGCGCCGAGCTCTTTGGC
CCCGATTCACCCAAACCCACCACCGCCACCTCCGCAGCCTCCGCCTCGCCCAACACCAAC
CTCTTCCGCTTCAAGAAAGACCACTCCGCTCCCACCTCACCCTTCGCTAAAGCTGCCGCC
GCGCACCATGACTGCACCGCGGGATCCGGAGACGCGCCGTCGCCGCAGAAGCCACCCAGG
AAGGTCCCCAAAACGCCGCATAAGGTCCTGGACGCGCCCTCCCTGCAGGACGACTTCTAT
CTCAACCTCGTCGACTGGTCCTCGCAGAACGTGCTCGCCGTCGGCCTCGGCACCTGCGTC
TACCTCTGGTCCGCGTCCAATAGCAAGGTCACCAAGCTCTGCGATTTGGGGCCTAGGGAC
AGCGTATGCGCCGTGCATTGGTCACGGGAAGGCTCTTATCTTTCCATTGGCACCGGCCTT
GGAGATGTCCAGATTTGGGATAGTTCTCGCTGTAAGCGGATTAGAAATATGGGAGGTCAC
CAAACAAGGACTGGGGTATTAGCATGGAGCTCATGCATCTTGTCGTCGGGTAGCAGGGAC
AAGAACATACTGCAGCATGACATCCGTGTCCCCAATGACTATATCAGCAAGTTTTCTGGT
CATAGATCAGAGGTTTGTGGACTCGAATGGTCGCATGACGACCGCGAGCTTGCCTCAGGC
GGAAATGACAACCAGTTATTAGTCTGGAACCAACGATCGCAACAGCCAGTTTTGCGGTTG
ACAGAACATACAGCTGCTGTTAAAGCAATAGCGTGGTCACCACATCAGCAAGGACTCCTA
GCATCAGGAGGTGGAACAGCTGATAGATGCATCAGGTTTTGGAACACGGCTAACGGAAAT
GTTCTGAACTCAATTGACACAGGCAGCCAGGTTTGCAACCTTGCCTGGTGCAAAAATGTG
AATGAGCTTGTGAGCACACATGGATATTCCCAAAATCAGATCATGGTGTGGAAATACCCA
TCCATGTCAAAGGTTGCAACTCTAACTGGACATACGATGCGTGTGCTTTACCTCGCGTCG
TCGCCTGATGGACAGACCATAGTAACAGGGGCAGGTGACGAAACTCTACGGTTCTGGAAC
ATATTTCCATCAGTTAGAACACAGACTCCTGTGCGTGATATTGGGCTCTCGTCATTCTCA
AGAAGCCACATCCGGTGA

Peptide Sequence

PEP ID

Zm00001d041957_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:3:145604154:145607270:-1 gene:Zm00001d041957 transcript:Zm00001d041957_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fizzy-related protein

Sequence

MAVAAPASDAKPRLNVPPSMASALRLDPVGLGAGPSMPSPSRRLAEPPKTPSPSKTTYSD
RFIPCRSSSRLQNFALIDSPLSPAKDDTPYSRLLRAELFGPDSPKPTTATSAASASPNTN
LFRFKKDHSAPTSPFAKAAAAHHDCTAGSGDAPSPQKPPRKVPKTPHKVLDAPSLQDDFY
LNLVDWSSQNVLAVGLGTCVYLWSASNSKVTKLCDLGPRDSVCAVHWSREGSYLSIGTGL
GDVQIWDSSRCKRIRNMGGHQTRTGVLAWSSCILSSGSRDKNILQHDIRVPNDYISKFSG
HRSEVCGLEWSHDDRELASGGNDNQLLVWNQRSQQPVLRLTEHTAAVKAIAWSPHQQGLL
ASGGGTADRCIRFWNTANGNVLNSIDTGSQVCNLAWCKNVNELVSTHGYSQNQIMVWKYP
SMSKVATLTGHTMRVLYLASSPDGQTIVTGAGDETLRFWNIFPSVRTQTPVRDIGLSSFS
RSHIR

Transcript Sequence

Transcript ID

Zm00001d041957_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:145604154:145607270:-1 gene:Zm00001d041957 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fizzy-related protein

Sequence

GCTCCCCTCCTGCAGTGGAGTCCTCCTCCTTTCCCACTTGCCCTGCCTTCCCTCGATCGA
GGCCCTTCCTTGTTCGTCGAGGAGAGATCGAAATCGAGATCGGGATCGGGAGATCCAAGG
AGGCGACGCGGAGGAAGGATTCTTGAGGTAACCATCTCCAGTAATCCATCTCATCCACCA
TGGCGGTGGCGGCGCCGGCCTCGGACGCCAAGCCGCGCCTCAACGTGCCACCGTCCATGG
CATCCGCGCTCCGCCTCGATCCCGTGGGGCTGGGGGCGGGACCCTCTATGCCGTCCCCCT
CCCGCCGACTCGCCGAGCCTCCCAAGACGCCCTCCCCATCCAAGACCACCTACAGCGACC
GTTTCATCCCCTGCCGCTCCTCCTCCCGCCTCCAGAACTTCGCGCTAATCGACTCCCCTC
TCTCCCCAGCCAAGGACGACACGCCCTACTCCCGCCTCCTCCGCGCCGAGCTCTTTGGCC
CCGATTCACCCAAACCCACCACCGCCACCTCCGCAGCCTCCGCCTCGCCCAACACCAACC
TCTTCCGCTTCAAGAAAGACCACTCCGCTCCCACCTCACCCTTCGCTAAAGCTGCCGCCG
CGCACCATGACTGCACCGCGGGATCCGGAGACGCGCCGTCGCCGCAGAAGCCACCCAGGA
AGGTCCCCAAAACGCCGCATAAGGTCCTGGACGCGCCCTCCCTGCAGGACGACTTCTATC
TCAACCTCGTCGACTGGTCCTCGCAGAACGTGCTCGCCGTCGGCCTCGGCACCTGCGTCT
ACCTCTGGTCCGCGTCCAATAGCAAGGTCACCAAGCTCTGCGATTTGGGGCCTAGGGACA
GCGTATGCGCCGTGCATTGGTCACGGGAAGGCTCTTATCTTTCCATTGGCACCGGCCTTG
GAGATGTCCAGATTTGGGATAGTTCTCGCTGTAAGCGGATTAGAAATATGGGAGGTCACC
AAACAAGGACTGGGGTATTAGCATGGAGCTCATGCATCTTGTCGTCGGGTAGCAGGGACA
AGAACATACTGCAGCATGACATCCGTGTCCCCAATGACTATATCAGCAAGTTTTCTGGTC
ATAGATCAGAGGTTTGTGGACTCGAATGGTCGCATGACGACCGCGAGCTTGCCTCAGGCG
GAAATGACAACCAGTTATTAGTCTGGAACCAACGATCGCAACAGCCAGTTTTGCGGTTGA
CAGAACATACAGCTGCTGTTAAAGCAATAGCGTGGTCACCACATCAGCAAGGACTCCTAG
CATCAGGAGGTGGAACAGCTGATAGATGCATCAGGTTTTGGAACACGGCTAACGGAAATG
TTCTGAACTCAATTGACACAGGCAGCCAGGTTTGCAACCTTGCCTGGTGCAAAAATGTGA
ATGAGCTTGTGAGCACACATGGATATTCCCAAAATCAGATCATGGTGTGGAAATACCCAT
CCATGTCAAAGGTTGCAACTCTAACTGGACATACGATGCGTGTGCTTTACCTCGCGTCGT
CGCCTGATGGACAGACCATAGTAACAGGGGCAGGTGACGAAACTCTACGGTTCTGGAACA
TATTTCCATCAGTTAGAACACAGACTCCTGTGCGTGATATTGGGCTCTCGTCATTCTCAA
GAAGCCACATCCGGTGAGGAGGCGGCAGGGCCTGGAGGGACCAGATCGGAGGCAGACGAA
ATGTTGTACTGATACTGAGATGTTGGTTTATTGAGTGATTCTTTTCTGTATATTGTGAGG
CCCGGTAATTTTTCATTGATTCTTTTTGTTGTTTGTACGTGTAAAAGACAAGAACTAAAA
GTGTAAGCGACATTTAACTTCACCAGTTGGATTGGTTTGTT