Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041954_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:3:145310255:145313127:-1 gene:Zm00001d041954 gene_biotype:protein_coding transcript_biotype:protein_coding description:ABC-type transport system involved in resistance to organic solvents%2C periplasmic component

Sequence

ATGCCGTCCGCTATGGCCAAATCCCTCCTCCTCCCTCACCCTTTCTTCTCCGTCTCACCC
CGCCCACACCCTCATCCGCGCGCCGGATTCCCTGTTCTCAAGCCCCGCCGCGCCGCGCTG
CTCGCGGCCACGCCCGCGCCGGACGCCAACACCAGCTCCAACAACAACCCCCTCGCCGCG
CTCTGGCGCCGCACCCTGCAGCCCCTCGGCGACTACGGCTTCGGCAAGCGCAGCGTCTGG
GAGGGCGGCGTCGGCCTCTTCATGGTCTCCGGGGCCGCCCTCCTCGCCCTCGCCCTCGCA
TGGCTCAGGGGATTCCAGCTCCGCTCCCGCTTTCGCAAGTACAACACCGTCTTCGAGTTC
ACGCAGGCGTGCGGCATCTGCGTCGGCACGCCCGTCCGGATACGAGGGGTCACCGTCGGA
TCCGTCGTCCGCGTCGACTCCTCCCTTAGGAGCATCGATGCAACTGTCGAGGTTGAAGAT
GATAAAATCATCATACCACGAAATTCAATGGTCGAGGTGAATCAGTCCGGTCTTCTAATG
GAGACACTCATTGATATCACACCAAAGGATCCACTGCCTGCACCTTCAGTAGGACCACTT
GACCCAGACTGCACCAAAGAAGGCTTGATTCTCTGTGACAAAGAGAGGATGAAAGGACAG
CAAGGTGTAAGCTTAGATGCATTGGTGGGAATATTTACCCGTCTGGGTAGAGACATGGAG
GAGATTGGTGTTAGCAAAAGCTATAAGTTAGCTGAAAAAGTTGCATCTATAATGGAAGAA
GCACAACCTCTTCTTACACGGGTACATCCATTTTTCCAAAATTTTCTCCAACTCTATGGA
AACTTATAA

Peptide Sequence

PEP ID

Zm00001d041954_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:3:145310255:145313127:-1 gene:Zm00001d041954 transcript:Zm00001d041954_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:ABC-type transport system involved in resistance to organic solvents%2C periplasmic component

Sequence

MPSAMAKSLLLPHPFFSVSPRPHPHPRAGFPVLKPRRAALLAATPAPDANTSSNNNPLAA
LWRRTLQPLGDYGFGKRSVWEGGVGLFMVSGAALLALALAWLRGFQLRSRFRKYNTVFEF
TQACGICVGTPVRIRGVTVGSVVRVDSSLRSIDATVEVEDDKIIIPRNSMVEVNQSGLLM
ETLIDITPKDPLPAPSVGPLDPDCTKEGLILCDKERMKGQQGVSLDALVGIFTRLGRDME
EIGVSKSYKLAEKVASIMEEAQPLLTRVHPFFQNFLQLYGNL

Transcript Sequence

Transcript ID

Zm00001d041954_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:145310255:145313127:-1 gene:Zm00001d041954 gene_biotype:protein_coding transcript_biotype:protein_coding description:ABC-type transport system involved in resistance to organic solvents%2C periplasmic component

Sequence

CTCCACCGCAACTGGGCCATCTGTTCTCCTTCCTCCTCTTCCTCCGCCACCGCGCTTCTG
AGGAGGAACCGTCCGAGAACGGGCAGCCAATTCTCCGATGCCGTCCGCTATGGCCAAATC
CCTCCTCCTCCCTCACCCTTTCTTCTCCGTCTCACCCCGCCCACACCCTCATCCGCGCGC
CGGATTCCCTGTTCTCAAGCCCCGCCGCGCCGCGCTGCTCGCGGCCACGCCCGCGCCGGA
CGCCAACACCAGCTCCAACAACAACCCCCTCGCCGCGCTCTGGCGCCGCACCCTGCAGCC
CCTCGGCGACTACGGCTTCGGCAAGCGCAGCGTCTGGGAGGGCGGCGTCGGCCTCTTCAT
GGTCTCCGGGGCCGCCCTCCTCGCCCTCGCCCTCGCATGGCTCAGGGGATTCCAGCTCCG
CTCCCGCTTTCGCAAGTACAACACCGTCTTCGAGTTCACGCAGGCGTGCGGCATCTGCGT
CGGCACGCCCGTCCGGATACGAGGGGTCACCGTCGGATCCGTCGTCCGCGTCGACTCCTC
CCTTAGGAGCATCGATGCAACTGTCGAGGTTGAAGATGATAAAATCATCATACCACGAAA
TTCAATGGTCGAGGTGAATCAGTCCGGTCTTCTAATGGAGACACTCATTGATATCACACC
AAAGGATCCACTGCCTGCACCTTCAGTAGGACCACTTGACCCAGACTGCACCAAAGAAGG
CTTGATTCTCTGTGACAAAGAGAGGATGAAAGGACAGCAAGGTGTAAGCTTAGATGCATT
GGTGGGAATATTTACCCGTCTGGGTAGAGACATGGAGGAGATTGGTGTTAGCAAAAGCTA
TAAGTTAGCTGAAAAAGTTGCATCTATAATGGAAGAAGCACAACCTCTTCTTACACGGGT
ACATCCATTTTTCCAAAATTTTCTCCAACTCTATGGAAACTTATAATTTATTTACCTTGC
TGGAATGCCTGTGGAACCAGTTTCTTTCAATCAGTACGGCTGCAAGTAAGTAAGCAGGGT
TGTTGGGTTCAAATGCCTTTTATTCCCAAGCGCCCACCCCTCATTCTGCATAGCCGCACA
GCTTTTCCCAACACGTCACCATGTGCCGATGTTCAAATTATTTTCTAATTAAATTATTTA
TCAAAATAGATTTCCACTTCAACTTATTTGCCTTGGCACATTACTAGATATTCCAAATAC
CAGCATGCTAGCTCTGCAATCAGCTATGACTCATACCTAAGTGAGACTTGAGGTCTACTG
CTAAAAATGTTGCAGAACAAGTTCACTATGCAGCTTGCCTTCCCCTGCTGGCATGTTTAC
TTGCCTCTGGAGCTCTACTTATGAGTAATGGTCAGAGGGAGGGAACCTCTGCTTAGTTGG
AGTGTGGTGTTAGGTTATTCTCTTCTTTTGTGGGCAAGGGGGGGGGGAGCAAGATGTTTG
GTTGTTCTTCCTTTTATGTTGCACGCATTTAGAAATTAAAACAATGGGTGGAGTGTGGTT
CTTCCTCCAGATAGCATGTGTATTAATTTTGTTTCTAGAATTGTGTTGGAAGCTACTTGT
GCTGTTGAATTGATATGCATGAAATTAAACGGTAGCTGTGGAACAGATTGAGGCTTTAGC
TGAAGAAATGCAACCTTTGCTCTCTGAGGTTAATGATAGTGATCTGCTGAAGGATGTGGA
GACTATAGCTAAAGGCCTGGCCGACGCGTCTGGTGACCTAAGAAGGCTGAAGTCGTCCAT
GCTTACCCCAGAGAACACAGATCTTATTAAGCAGTCTATTTTCACCCTTATATTTACCCT
AAAGAACATTGAGAGTATCAGCTCCGACATCTCTGGTTTCACGGGCGATGAGACGACAAG
GCGGAACATCAAACTTCTGATCAAGTCTCTCAGCAGGCTATTGTGATTGGTGTGCATAAT
GATGGATTGCTTTGCATGGGACGGGGAATGGGGAAATGGTTGCTGGTGGGGGGTCTCTCG
GTCTCGGTGGCACAGAGGTAGGAAGAGAAGGCATAGCTAATTAACGTTCCACGAGGTTTT
GGTTATTCTGCTTCTAAGTTT