Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041912_T011
CDS Infomation

cds chromosome:B73_RefGen_v4:3:143141541:143145698:1 gene:Zm00001d041912 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative serine esterase family protein
Sequence

ATGTTGCTTGAAGAACTGAACAAAATCAGTGGTGCTATTGGTAAGACAGTAGAGGATTTA
GATGTTGCTGACTTGAATCTTGGTAAATATGAGTCATTTAATCCATCAAAATCTTGGCTA
CCGAATTCTAGTAAAGTGTTCCCCGAAACTGGCAAAGGTGTGGGACAGTTGGCTGGAATT
TTACATGACTTCTTGGAGAGACCCAACGATATGGTTAATGGTACAGATGATTCTTTATTG
TATACTCTTCCCCATGAAGAGCTGTTTGAACTGTTTCTAACTCTGAGTGGACAGCTTTCA
CTTCTATGGAATGCATTCTTGAAATTTCATAGGCTAAATAAAACAAAGATATTGGACTAC
TTGCACGATGCTTGGGCTATTGGCAGGAAGGCAGAATGGTCAATATGGACTATTCACTCG
AAAATTGAGATCCCTCATCGCTATCTGCAGAGTATGAGTGATGACTCACCCCACCGTTAT
TCTCTTAGAGTTTCTGGCTCAAGGAAGTTCCATGATGACCATGTACAGAGCTCTGCTTCA
CGGGCGGAACTACACAGGAAAAGCATAGCACAAATGAAGATTAATCCACATTATGTTCAA
GATATGCATATATATGGTGATCCTTCACGTGTTCCTGTTGTTCTTATAGAACAACATGTC
ATGGTTGTTCCACAGCATAGTTCCAGCAAGGATATGGCTTCAAATGTTTCTGAACAAAAG
GATACTATTGTGGTACCGAAACTACAAGGAGAGCCTCTGGTACCCAAAAGTAGTGCTGGT
AAAAAAAGTGGACGCATATTGAGAGCTGTCATTTTTGTGCATGGATTTCAGGGTCACCAT
CTGGATTTACGTCTTGTTAGAAACCAATGGCTTCTATTGGATCCTGGAGCTGACTGCCTG
ATGTCTGAGGCTAATGAAGATAAAACATCTGGAGATTTTAAAGAAATGGGTAGCAGGTTG
GCTGGGGAGGTAGTTGCCTTCCTGAAGAAGAAAATGGATAAGCTTTCGAGATATGGAGGC
TGCAAAGAGCTGAAGTTAAGTTTCGTAGGTCATTCCATTGGAAACGTCATCATTAGAAGT
GCCCTGGCAGAACCTGCATTGCAACCATACTTGAAGAACCTTTACACTTACATGTCAATA
TCAGGGCCTCACTTGGGTTACTGGTACAGTTCAAATTCTTTGTTCAATTCTGGACTCTGG
CTGCTGAAAAAGCTCAAGGGTGCGCAATGCATCCATCAACTCACTTTCAGTGATGATCAA
GACCCCCAGAATACATACTTTTATAAGCTTTGCAAGTTGAAAACGTTGGAGAACTTCCAA
AATATCATATTGCTGTCATCACCACAGGATGGCTACGTACCATATCATTCAGCGAGAATC
GAGCTCTGCCCAGCTGCATCATCGGACACGTCAAAGAAGGGCCAAGTCTTCACAGAAATG
CTGAACAACTGCTTGGACCAGATCCGCACGCCCTCGTCCGACACCCGGACATTCATGCGC
TGCGACGTGAATTTCGACCAGTCCAACCAAGGGCGAAGCCTGAACACCATGATTGGCAGA
GCGGCCCACATCGAGTTCCTGGAAACCGACCTCTACGCCAAGTTCATCATGTGGTCCTTT
CCCGACCTGTTCCGATGA

Peptide Sequence

PEP ID

Zm00001d041912_P011
PEP Infomation

pep chromosome:B73_RefGen_v4:3:143141541:143145698:1 gene:Zm00001d041912 transcript:Zm00001d041912_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative serine esterase family protein
Sequence

MLLEELNKISGAIGKTVEDLDVADLNLGKYESFNPSKSWLPNSSKVFPETGKGVGQLAGI
LHDFLERPNDMVNGTDDSLLYTLPHEELFELFLTLSGQLSLLWNAFLKFHRLNKTKILDY
LHDAWAIGRKAEWSIWTIHSKIEIPHRYLQSMSDDSPHRYSLRVSGSRKFHDDHVQSSAS
RAELHRKSIAQMKINPHYVQDMHIYGDPSRVPVVLIEQHVMVVPQHSSSKDMASNVSEQK
DTIVVPKLQGEPLVPKSSAGKKSGRILRAVIFVHGFQGHHLDLRLVRNQWLLLDPGADCL
MSEANEDKTSGDFKEMGSRLAGEVVAFLKKKMDKLSRYGGCKELKLSFVGHSIGNVIIRS
ALAEPALQPYLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLLKKLKGAQCIHQLTFSDDQ
DPQNTYFYKLCKLKTLENFQNIILLSSPQDGYVPYHSARIELCPAASSDTSKKGQVFTEM
LNNCLDQIRTPSSDTRTFMRCDVNFDQSNQGRSLNTMIGRAAHIEFLETDLYAKFIMWSF
PDLFR

Transcript Sequence

Transcript ID

Zm00001d041912_T011
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:143141541:143145698:1 gene:Zm00001d041912 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative serine esterase family protein
Sequence

GGTCTGAGCTTCATGCTTCTAGTGCCACATCTTCAGCAGCTGTGCACGAATTTAGGATCC
CACACAGAGCACTTCTGGGTCTACACTCATACTGTCCTGTTCACTTTGATGCGTTCCACT
CTGTGCTTGTTGATCTGACATTGCACATAGTGTACCTGAAAGCTGGTGCAGCTAAATCAT
CACTGAAGGTACCAGAGCAAGGTTTACGTCCTACATCATATCACATTGTTAAGGCATTAT
TAACTTCTAGAAAAATGTTGCTTGAAGAACTGAACAAAATCAGTGGTGCTATTGGTAAGA
CAGTAGAGGATTTAGATGTTGCTGACTTGAATCTTGGTAAATATGAGTCATTTAATCCAT
CAAAATCTTGGCTACCGAATTCTAGTAAAGTGTTCCCCGAAACTGGCAAAGGTGTGGGAC
AGTTGGCTGGAATTTTACATGACTTCTTGGAGAGACCCAACGATATGGTTAATGGTACAG
ATGATTCTTTATTGTATACTCTTCCCCATGAAGAGCTGTTTGAACTGTTTCTAACTCTGA
GTGGACAGCTTTCACTTCTATGGAATGCATTCTTGAAATTTCATAGGCTAAATAAAACAA
AGATATTGGACTACTTGCACGATGCTTGGGCTATTGGCAGGAAGGCAGAATGGTCAATAT
GGACTATTCACTCGAAAATTGAGATCCCTCATCGCTATCTGCAGAGTATGAGTGATGACT
CACCCCACCGTTATTCTCTTAGAGTTTCTGGCTCAAGGAAGTTCCATGATGACCATGTAC
AGAGCTCTGCTTCACGGGCGGAACTACACAGGAAAAGCATAGCACAAATGAAGATTAATC
CACATTATGTTCAAGATATGCATATATATGGTGATCCTTCACGTGTTCCTGTTGTTCTTA
TAGAACAACATGTCATGGTTGTTCCACAGCATAGTTCCAGCAAGGATATGGCTTCAAATG
TTTCTGAACAAAAGGATACTATTGTGGTACCGAAACTACAAGGAGAGCCTCTGGTACCCA
AAAGTAGTGCTGGTAAAAAAAGTGGACGCATATTGAGAGCTGTCATTTTTGTGCATGGAT
TTCAGGGTCACCATCTGGATTTACGTCTTGTTAGAAACCAATGGCTTCTATTGGATCCTG
GAGCTGACTGCCTGATGTCTGAGGCTAATGAAGATAAAACATCTGGAGATTTTAAAGAAA
TGGGTAGCAGGTTGGCTGGGGAGGTAGTTGCCTTCCTGAAGAAGAAAATGGATAAGCTTT
CGAGATATGGAGGCTGCAAAGAGCTGAAGTTAAGTTTCGTAGGTCATTCCATTGGAAACG
TCATCATTAGAAGTGCCCTGGCAGAACCTGCATTGCAACCATACTTGAAGAACCTTTACA
CTTACATGTCAATATCAGGGCCTCACTTGGGTTACTGGTACAGTTCAAATTCTTTGTTCA
ATTCTGGACTCTGGCTGCTGAAAAAGCTCAAGGGTGCGCAATGCATCCATCAACTCACTT
TCAGTGATGATCAAGACCCCCAGAATACATACTTTTATAAGCTTTGCAAGTTGAAAACGT
TGGAGAACTTCCAAAATATCATATTGCTGTCATCACCACAGGATGGCTACGTACCATATC
ATTCAGCGAGAATCGAGCTCTGCCCAGCTGCATCATCGGACACGTCAAAGAAGGGCCAAG
TCTTCACAGAAATGCTGAACAACTGCTTGGACCAGATCCGCACGCCCTCGTCCGACACCC
GGACATTCATGCGCTGCGACGTGAATTTCGACCAGTCCAACCAAGGGCGAAGCCTGAACA
CCATGATTGGCAGAGCGGCCCACATCGAGTTCCTGGAAACCGACCTCTACGCCAAGTTCA
TCATGTGGTCCTTTCCCGACCTGTTCCGATGACGACGACGACACCGCTCGTCTTTGTAAT
ACTGGCACATACCAAACCAATAACGCACACTACCCAGTACTGACCAGGCAAGGAATACTA
AAGCTCGCTCCACCAGAACCCAACACCGAGACAGGCAGGAAGCACTGTGAAGGTCCTAGA
AGCAATGGTTTTTCCAGCTTGCTAGATCCTATTCTGTATAAGTAGTTGATTCTTTTTCAT
TTCATTCATAGTGCTGTAGATTGCACCCTTGCTGTGAAAATTTATAATCCTTGTCGTCTG
TTGTACCTTACACTTCAGTTTAGGATGTGCTGACAATCAGTGAGCTTATTATGTCCAAAT
AAGCTCTCTTTTT