Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041900_T017
CDS Infomation	cds chromosome:B73_RefGen_v4:3:142564876:142576362:-1 gene:Zm00001d041900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	ATGGCCGCCACCGTCGCCTCCGAGCACTCCATCGATCGCAAGCTCTCCGCGCTCGTGGAG CAAGCTCGGCCGAGCGCGGCGGCCATGCTCGCCGCCGCCGAGGCCGTTGACGCCGTCGCG GAGCTCATCAAGAGGGTGCCACAGCAGCAAGCGACGCCGGAGGCCGCGCGGGGTTTTTTG AGGGACCTGGGACTGGAAACCGAGAAGCTTTCCTTCACCTTCCGTCCGCCGGAGGTGGTG CGTCTCGCCGGGAGCCACGCGGCCGGCGCGGTCGCGAGGCCCGAAGTCGCTGCCGACCTC CTCGTACGCTTGCCAAAGGAATGCTTCCACGAGAAGGATTTCCTAAATCACCGGTACCAT GCAAAGAGGTGTCTTTACCTCTGTGTCGTCGAGAAAAACTTGAGGTGCTCTAAATTAATC CGCAAAGTTTCATGGTCTACCCTCCAAGATGAGGCTCGAAAGCCCGTGCTTCATGTATAT CCAGCGACCGAAATTGTAGACCTTCCTGGATTCCATGTAAGAATAATCCCAACTGCGGAT TCTTTGTTCAACGTTTCAAAGTTGAATGTATCAACAAGAAATAATGTCCGTGCATATACA AAAGATGGTGTAAACCTACCCACACCAAAGTATAATTGTAGCATATTGGAGGATATGTTT TTGGAGGAAAATGCAAACTTTATTAGTAGCACCTTTGCTAACTGGAAAGCTTTGCAAGAG GCCTTGGTGTTGGTAAAGGTTTGGGCACGTCAAAGAACTTCAATATACACACATGATTGT CTCAATGGATACTTAATTTCTGCCATCCTTGTGTTTCTTACTGTGGACTCTGGAGGAAGC ATGATTACTAGATCAATGACCACAAGACAAATTTTCCGTGTATTGATGAATTTTTTGGCA ACTTCCAAGGCGTGGGCAAAGGGATTGGTGATTCAATCAATGAAGAAGCGTACGGTCACC AAAGAGGACATTGCCACTTGCCTGAAGACATTTGATGTTGCCGTATTTGATATATCTGGC CACATTAATTTGGCGTTTCGTATGACAAGGTCTGCTTTTTTAGAGCTTCAAGATGAGGCA GTTTGCGCACTTAGTTGCCTTGATAAATGCAGAGATGGTGGACTTGAAGAGCTTTTTATG ACCAAAGTCGACTTTTGTGCAAAGTTTGACACATGTTTGAGGATAAACTTGAAAGGGAAC TCTAAGGTTACTGGATTAAGCTATTGTGTGGATGACGAGTCTTGGAGAATTCTTGAGAAA GATGTTCAGTCTTTGCTGCAACAAGGACTTACAGATAGAACAAAGATGATCCGAGCCCTA TGGAGAAGCACACCTTCTGAATGGAAAATAGTGGAAGGTTTCTCAGAATTTGGCAGCAGT CCGCTTCTGGTTGGTATGATGGTTAGCTCATTGGAAAAGAGTTTTCGCCTTGTTGATATT GGTCCAAACCCTGAGAACCGTGTTGAGGCTGTTAAATTTAGGAAATTTTGGGGAGAGAAA GCTGAGCTTAGAAGATTCAAGGATGGAAATATTGCCGAAAGCACAGTTTGGGAATGCCAA TCCTGGGAGAAGCATACAATTATTAAAAGGATTGCTGATTATGTGCTTATGAAACATTTG TCGCTGCAGAAGGATGATTTGATTCATGTTGTTGATCAGCTGGACTTTTGCCTCTTAGTT GATGGCCAAGATCCGGTCTCGTCTTCTGGAGCTTTGCTTGAAGCTTTTGATACTATTGCT AAGCAGTTACGTCTCTTAGATGATATTCCTCTTAAAATATCTACCGTGCAACCCCTAGAC TCAGCTTTTAGGCACACTTCTGTGTTTCCTCCTGAACCTCATCCACTGGCATACGGAAGG AATTCTCAGAGGCTACCGAAATTCGCAACAACTTGCATAAGATCTTTAGAAGTTATGATT CAGCTAGAGGGATCTGGTAACTGGCCTTTGGATCCCGTGGCCATGGAGAAGACAAAGACT GCATTTCTTTTAAAAATTGGTGAAAGCTTGGAGGATCGAGGAATGTTTGTTTCAGCCAGT GAAAATGAGGTGAATGTCCTTACATCTGGATATTCATTCTTACTCAAAATATTTCATGAA AGAGGTTTAGTGATGCAAAAGCCAGTTGGAGATGACAAGACACAAAGTGTTCTATCAGAA GATAAGATGCTTTTTCAGCGGAGCCAGCACTCTAGTATGATCAATGGTTTGCATGGTCGT TACCAGGTGTATGGACCAGTAGTTAGGCTAGCAAAAAGATGGATTTCTGCACATCTATTT TCTTCATTTATCTCAGAGGAGGCAGTTGAGCTGGTAGTTGCACATATATTTTTGAAGCCA TTCCCATTCCATGCCCCATCTTCTCGGGTTGCTGGGTTTCTCAGGTTTTTGCGGTTGTTA TCCAGTTTTGACTGGATCTTTTCACCCATGGTTATTGACATAAATAATGACTTCAACCTG ATGGATGAGAAGGAGATCAATGATAACTTTATGCTGAGCAGAAAATCTTATGAGCGAAAC CCCCATGATATAGAGCCTGCAATGTTTCTTGCTACGTCATATGATAAAACATCTGAAGCA TGGACAAAACAGTCACCAAGCAAGTCGGTTCTCAAACGGGTAGCTGCTTATGCTAAAAGC AGTGCGGAGCTTTTAACAAATCTTATGCTTCATGGTCCATCAGGGGAATATACATGGGAG TGCCTGTTTCGAACACCTATGAGCAACTATGATGCTGTTATTCTCCTCCATCAAGAGAAG CTTTGTTGCCCCCACCACGTACTTTTTCCTGCTGAGAACCCTGACGGTAAGCTGGTGGTC TGGGGCAAACCAAGTAAAGATTTCTGCCCCTATATGCCACTGAACAAAGGGGCAGTGAAA GGTTTGCATGATGCAAGAGAGAAACTCTTGGTAAACTTTGACCCGACTACATACTTCTTG CGAGACTTGAAGTGCGCATTCTCCAAGACCTTCAAGCTGTGGTATGGTTCAGTTGGAGGA GACGCTGTGGGTCTTACATGGGAGAACCCAAAGAAGCGTGGCAGAGAGGAGGCTGATGAG GCTGCTCCCGAGCCGACATCTATCCTTAAGGAGGTTGGAGATGTTGGTAAAGGTTTAGTG AGGGGTGTGTACCTTGTCAAGGCACCAAAGTTTCAGTAA

Peptide Sequence

PEP ID	Zm00001d041900_P017
PEP Infomation	pep chromosome:B73_RefGen_v4:3:142564876:142576362:-1 gene:Zm00001d041900 transcript:Zm00001d041900_T017 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	MAATVASEHSIDRKLSALVEQARPSAAAMLAAAEAVDAVAELIKRVPQQQATPEAARGFL RDLGLETEKLSFTFRPPEVVRLAGSHAAGAVARPEVAADLLVRLPKECFHEKDFLNHRYH AKRCLYLCVVEKNLRCSKLIRKVSWSTLQDEARKPVLHVYPATEIVDLPGFHVRIIPTAD SLFNVSKLNVSTRNNVRAYTKDGVNLPTPKYNCSILEDMFLEENANFISSTFANWKALQE ALVLVKVWARQRTSIYTHDCLNGYLISAILVFLTVDSGGSMITRSMTTRQIFRVLMNFLA TSKAWAKGLVIQSMKKRTVTKEDIATCLKTFDVAVFDISGHINLAFRMTRSAFLELQDEA VCALSCLDKCRDGGLEELFMTKVDFCAKFDTCLRINLKGNSKVTGLSYCVDDESWRILEK DVQSLLQQGLTDRTKMIRALWRSTPSEWKIVEGFSEFGSSPLLVGMMVSSLEKSFRLVDI GPNPENRVEAVKFRKFWGEKAELRRFKDGNIAESTVWECQSWEKHTIIKRIADYVLMKHL SLQKDDLIHVVDQLDFCLLVDGQDPVSSSGALLEAFDTIAKQLRLLDDIPLKISTVQPLD SAFRHTSVFPPEPHPLAYGRNSQRLPKFATTCIRSLEVMIQLEGSGNWPLDPVAMEKTKT AFLLKIGESLEDRGMFVSASENEVNVLTSGYSFLLKIFHERGLVMQKPVGDDKTQSVLSE DKMLFQRSQHSSMINGLHGRYQVYGPVVRLAKRWISAHLFSSFISEEAVELVVAHIFLKP FPFHAPSSRVAGFLRFLRLLSSFDWIFSPMVIDINNDFNLMDEKEINDNFMLSRKSYERN PHDIEPAMFLATSYDKTSEAWTKQSPSKSVLKRVAAYAKSSAELLTNLMLHGPSGEYTWE CLFRTPMSNYDAVILLHQEKLCCPHHVLFPAENPDGKLVVWGKPSKDFCPYMPLNKGAVK GLHDAREKLLVNFDPTTYFLRDLKCAFSKTFKLWYGSVGGDAVGLTWENPKKRGREEADE AAPEPTSILKEVGDVGKGLVRGVYLVKAPKFQ

Transcript Sequence

Transcript ID	Zm00001d041900_T017
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:142564876:142576362:-1 gene:Zm00001d041900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	TAAACCCGCGACCGCACTGGCCTTTCCTCCCGCCGGCGATCACCGAAGCCAACCATGGCC GCCACCGTCGCCTCCGAGCACTCCATCGATCGCAAGCTCTCCGCGCTCGTGGAGCAAGCT CGGCCGAGCGCGGCGGCCATGCTCGCCGCCGCCGAGGCCGTTGACGCCGTCGCGGAGCTC ATCAAGAGGGTGCCACAGCAGCAAGCGACGCCGGAGGCCGCGCGGGGTTTTTTGAGGGAC CTGGGACTGGAAACCGAGAAGCTTTCCTTCACCTTCCGTCCGCCGGAGGTGGTGCGTCTC GCCGGGAGCCACGCGGCCGGCGCGGTCGCGAGGCCCGAAGTCGCTGCCGACCTCCTCGTA CGCTTGCCAAAGGAATGCTTCCACGAGAAGGATTTCCTAAATCACCGGTACCATGCAAAG AGGTGTCTTTACCTCTGTGTCGTCGAGAAAAACTTGAGGTGCTCTAAATTAATCCGCAAA GTTTCATGGTCTACCCTCCAAGATGAGGCTCGAAAGCCCGTGCTTCATGTATATCCAGCG ACCGAAATTGTAGACCTTCCTGGATTCCATGTAAGAATAATCCCAACTGCGGATTCTTTG TTCAACGTTTCAAAGTTGAATGTATCAACAAGAAATAATGTCCGTGCATATACAAAAGAT GGTGTAAACCTACCCACACCAAAGTATAATTGTAGCATATTGGAGGATATGTTTTTGGAG GAAAATGCAAACTTTATTAGTAGCACCTTTGCTAACTGGAAAGCTTTGCAAGAGGCCTTG GTGTTGGTAAAGGTTTGGGCACGTCAAAGAACTTCAATATACACACATGATTGTCTCAAT GGATACTTAATTTCTGCCATCCTTGTGTTTCTTACTGTGGACTCTGGAGGAAGCATGATT ACTAGATCAATGACCACAAGACAAATTTTCCGTGTATTGATGAATTTTTTGGCAACTTCC AAGGCGTGGGCAAAGGGATTGGTGATTCAATCAATGAAGAAGCGTACGGTCACCAAAGAG GACATTGCCACTTGCCTGAAGACATTTGATGTTGCCGTATTTGATATATCTGGCCACATT AATTTGGCGTTTCGTATGACAAGGTCTGCTTTTTTAGAGCTTCAAGATGAGGCAGTTTGC GCACTTAGTTGCCTTGATAAATGCAGAGATGGTGGACTTGAAGAGCTTTTTATGACCAAA GTCGACTTTTGTGCAAAGTTTGACACATGTTTGAGGATAAACTTGAAAGGGAACTCTAAG GTTACTGGATTAAGCTATTGTGTGGATGACGAGTCTTGGAGAATTCTTGAGAAAGATGTT CAGTCTTTGCTGCAACAAGGACTTACAGATAGAACAAAGATGATCCGAGCCCTATGGAGA AGCACACCTTCTGAATGGAAAATAGTGGAAGGTTTCTCAGAATTTGGCAGCAGTCCGCTT CTGGTTGGTATGATGGTTAGCTCATTGGAAAAGAGTTTTCGCCTTGTTGATATTGGTCCA AACCCTGAGAACCGTGTTGAGGCTGTTAAATTTAGGAAATTTTGGGGAGAGAAAGCTGAG CTTAGAAGATTCAAGGATGGAAATATTGCCGAAAGCACAGTTTGGGAATGCCAATCCTGG GAGAAGCATACAATTATTAAAAGGATTGCTGATTATGTGCTTATGAAACATTTGTCGCTG CAGAAGGATGATTTGATTCATGTTGTTGATCAGCTGGACTTTTGCCTCTTAGTTGATGGC CAAGATCCGGTCTCGTCTTCTGGAGCTTTGCTTGAAGCTTTTGATACTATTGCTAAGCAG TTACGTCTCTTAGATGATATTCCTCTTAAAATATCTACCGTGCAACCCCTAGACTCAGCT TTTAGGCACACTTCTGTGTTTCCTCCTGAACCTCATCCACTGGCATACGGAAGGAATTCT CAGAGGCTACCGAAATTCGCAACAACTTGCATAAGATCTTTAGAAGTTATGATTCAGCTA GAGGGATCTGGTAACTGGCCTTTGGATCCCGTGGCCATGGAGAAGACAAAGACTGCATTT CTTTTAAAAATTGGTGAAAGCTTGGAGGATCGAGGAATGTTTGTTTCAGCCAGTGAAAAT GAGGTGAATGTCCTTACATCTGGATATTCATTCTTACTCAAAATATTTCATGAAAGAGGT TTAGTGATGCAAAAGCCAGTTGGAGATGACAAGACACAAAGTGTTCTATCAGAAGATAAG ATGCTTTTTCAGCGGAGCCAGCACTCTAGTATGATCAATGGTTTGCATGGTCGTTACCAG GTGTATGGACCAGTAGTTAGGCTAGCAAAAAGATGGATTTCTGCACATCTATTTTCTTCA TTTATCTCAGAGGAGGCAGTTGAGCTGGTAGTTGCACATATATTTTTGAAGCCATTCCCA TTCCATGCCCCATCTTCTCGGGTTGCTGGGTTTCTCAGGTTTTTGCGGTTGTTATCCAGT TTTGACTGGATCTTTTCACCCATGGTTATTGACATAAATAATGACTTCAACCTGATGGAT GAGAAGGAGATCAATGATAACTTTATGCTGAGCAGAAAATCTTATGAGCGAAACCCCCAT GATATAGAGCCTGCAATGTTTCTTGCTACGTCATATGATAAAACATCTGAAGCATGGACA AAACAGTCACCAAGCAAGTCGGTTCTCAAACGGGTAGCTGCTTATGCTAAAAGCAGTGCG GAGCTTTTAACAAATCTTATGCTTCATGGTCCATCAGGGGAATATACATGGGAGTGCCTG TTTCGAACACCTATGAGCAACTATGATGCTGTTATTCTCCTCCATCAAGAGAAGCTTTGT TGCCCCCACCACGTACTTTTTCCTGCTGAGAACCCTGACGGTAAGCTGGTGGTCTGGGGC AAACCAAGTAAAGATTTCTGCCCCTATATGCCACTGAACAAAGGGGCAGTGAAAGGTTTG CATGATGCAAGAGAGAAACTCTTGGTAAACTTTGACCCGACTACATACTTCTTGCGAGAC TTGAAGTGCGCATTCTCCAAGACCTTCAAGCTGTGGTATGGTTCAGTTGGAGGAGACGCT GTGGGTCTTACATGGGAGAACCCAAAGAAGCGTGGCAGAGAGGAGGCTGATGAGGCTGCT CCCGAGCCGACATCTATCCTTAAGGAGGTTGGAGATGTTGGTAAAGGTTTAGTGAGGGGT GTGTACCTTGTCAAGGCACCAAAGTTTCAGTAAACTGACAGGGCGTGTGCAACTGAAGAT CTGACCAACAAACCGATGCACAAGAAGGAAGACTTCCAAGTGTTGGT