Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041873_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:141735093:141752537:-1 gene:Zm00001d041873 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase superfamily protein
Sequence

ATGAGGCTGCTGCCGGATTCACCACTACTGCTGTGCGTTGTGCTCGTCTTCACTGCGATT
CCATCTGAGCAAGATTCTTCTGGTGTGCTCGGAACAAGCCAAAGCCAAGCAGGTGGCAGC
AACGCTCTTCCCGCCGCCGGTTGCCCTAGAAGCTGTGGCAACCTCACCTTCGACTACCCA
TTCGGCATCGGCTCCAACTGTTCTAGGTCTCCCGCCTTCAGCCTCACCTGCGACAGCACC
ACGCAAACCCCCAGGCTCTACTTTGAGGACGACAGCATCACGGAGGTCGTTGCTTATGGA
AGCACCTGGTTGCAGATCAGCCTTTCCCAGGCCATTCCCATCATGCATGGTGGTGTCGTC
AGCACTTACAACATGTCGTGGAAGTCTTCTGGAAGCGGCTTCACCCTATTCTATGCGAAC
CTGAACATCACAGGCTGCGACTTCGATATATACCAACTGCAGGATAGGCATGCGTCGTCC
GTGAAGCTCTGCACAGTCACCTGTCCTGATGCAGGGATCACGGACAAGGTGGCCAGGCAG
AACTGCAATGGAACAGGGTGTTGCTCCGTCAACTTGGATGTTCTTGAAGCCTTCCAGCTA
CAGTTTGTCCTCCGCAGCCACGGCAGAGCTCGACTTGGCACGCACACTAGCCGAAGCTCC
CTATGGGATAGCATCAATGTAACTTCCACCGATGCAGAAATCCTGTGGAGTATTGTGGAT
CAACCGACGTGCGCCAGCGCCATGGATGACAGTGCAAACTATGCCTGTGTAAGTAACCAT
AGCAACTGCTATGATGGCTTGGGTGGGAGATTAGATCTTGGATATATCTGCAGATGCGAT
GGTGGTTATAGGGGCAATCCATATGTACCCAATGGCTGCTCACGGGATAAAGGATATAAT
CCTAAGGAACAAAAGGAGAACTGCCAGCGATCATGCGGTAACATCAGTGTCCCGTTCCCT
TTTGGCTTAGAAGAAGGTTGCTTCGCAAGAAGGCTATTTCAGCTCAACTGCACAAATACA
GCGTCTTCCAGTCTCCAGTTCGATGACGAACATCAAGTGACACGCATACATATCAATGAG
GGGCTTGTGGACATTAAATACACCCCACTTTACGAACAGGAGATGTTTAGGGTGTATGTA
TCTAATGAACCTGGCCTGTACATTGGCTCTGGGGAATCGTCCTCTGTGCAATGGGCTGTT
GCCAATCTGACCTGCCACGAAGCAATGCAGAACAAGTCGGGATATGCATGTGTAAGCATC
AGTAGCACATGTTTGGGTGTCAACTCAACAGATGATTACATTGGCTATCGATGCAAATGT
CTGCACGGATTTCAGGGGAATCCATACATACACAATGGATGCCAAGCTTTACCAATTAAT
GGGGAAAGTACGAAAAAGCAAAATCTTCTATTAGGTATTGTGATTGGGCTTAGCAGTGGC
ATCGGGATTTTACTTCTCGGCTTATGTGCAACAGTGCTTCTTCGCAAATGGAAAAGGGAC
ATCAAAAAGCAGCAACGAAAAAAATATTTTCAGAAAAATAAAGGCCTTCTCTTGGAACAA
CTGATATCATCCGATGAAAATGCAAGTGAAAAAACAAAGATTTTCACTTTGGAAGACCTG
GAAAAGGCAACAAACAATTTTGATCCTACACGAATCATTGGCCATGGAGGCCATGGCATG
GTGTATAAGGGTATCTTATCTGACCAGCGTGTGGTGGCAATAAAAAGGTCTAAGAACATT
GAGGAAGGTGAGATCAGTCAATTCATTAATGAGGTAGCAATTCTCTCTCAAATAAATCAT
AGAAATATAGTGAAGCTTTTTGGGTGTTGTCTTGAAACTGAGGTCCCACTGTTGGTGTAT
GACTTCATTTCAAATGGATCATTGTTCGAAATTCTACATTCTAGTTCAAGCAGTGGTTTC
TCATTGTCATGGGATGACTGCTTAAGAATAGCTGCAGAAGCTGCAGGGGCTCTCTATTAT
CTACACTCAGCAGCTTCAGTATCAATCTTCCATCGAGATGTGAAGTCCTCTAACATACTA
CTAGATTCAAACTATACTGCAAAAGTTTCAGATTTTGGTGCTTCTAGATTGGTTCCTATT
GACCAAACTCATGTTGTCACAAATATCCAAGGTACATTTGGGTACTTAGACCCAGAGTAT
TACCATACTGGACAGCTAAATGATAAGAGTGATGTATATAGTTTCGGTGTTGTGCTTGTG
GAACTACTCCTGAGAAGGGAGCCTATCATTACAAGTGAGACAGGGTCAAAGCAGAACTTA
TCTAATTACTTTCTTTGGGAGATGAAGACAAGGCCAACAAAAGAGATAGTGGCTACTCAG
GTTTGTGAGGAAGCAACCGAGGAAGAGATTAATAGCATTGCCTCGCTTGCAGAGATGTGT
TTGAGACTCAACAGTGGGGAGAGACCTACTATGAAGCAAGTCGAGATGAATTTGCAGCTC
TTGAGAACAAAACGGTCAAATTCATGCCATGTTGTTCAAGATAATGCTGAAGAGATACAA
CCATTGCTTTGTACAGGAGCTGAATCTAGATACGAGACGTTTTCTATTACCTTGGGTGGT
AGTTCTAATGCAGAGTCTCAATACAGCCAAAGATTCAATAGCTTGGAGCACGATTTTAAA
TCATCTCTTGGGACGCCACACTAA

Peptide Sequence

PEP ID

Zm00001d041873_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:141735093:141752537:-1 gene:Zm00001d041873 transcript:Zm00001d041873_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase superfamily protein
Sequence

MRLLPDSPLLLCVVLVFTAIPSEQDSSGVLGTSQSQAGGSNALPAAGCPRSCGNLTFDYP
FGIGSNCSRSPAFSLTCDSTTQTPRLYFEDDSITEVVAYGSTWLQISLSQAIPIMHGGVV
STYNMSWKSSGSGFTLFYANLNITGCDFDIYQLQDRHASSVKLCTVTCPDAGITDKVARQ
NCNGTGCCSVNLDVLEAFQLQFVLRSHGRARLGTHTSRSSLWDSINVTSTDAEILWSIVD
QPTCASAMDDSANYACVSNHSNCYDGLGGRLDLGYICRCDGGYRGNPYVPNGCSRDKGYN
PKEQKENCQRSCGNISVPFPFGLEEGCFARRLFQLNCTNTASSSLQFDDEHQVTRIHINE
GLVDIKYTPLYEQEMFRVYVSNEPGLYIGSGESSSVQWAVANLTCHEAMQNKSGYACVSI
SSTCLGVNSTDDYIGYRCKCLHGFQGNPYIHNGCQALPINGESTKKQNLLLGIVIGLSSG
IGILLLGLCATVLLRKWKRDIKKQQRKKYFQKNKGLLLEQLISSDENASEKTKIFTLEDL
EKATNNFDPTRIIGHGGHGMVYKGILSDQRVVAIKRSKNIEEGEISQFINEVAILSQINH
RNIVKLFGCCLETEVPLLVYDFISNGSLFEILHSSSSSGFSLSWDDCLRIAAEAAGALYY
LHSAASVSIFHRDVKSSNILLDSNYTAKVSDFGASRLVPIDQTHVVTNIQGTFGYLDPEY
YHTGQLNDKSDVYSFGVVLVELLLRREPIITSETGSKQNLSNYFLWEMKTRPTKEIVATQ
VCEEATEEEINSIASLAEMCLRLNSGERPTMKQVEMNLQLLRTKRSNSCHVVQDNAEEIQ
PLLCTGAESRYETFSITLGGSSNAESQYSQRFNSLEHDFKSSLGTPH

Transcript Sequence

Transcript ID

Zm00001d041873_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:141735093:141752537:-1 gene:Zm00001d041873 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase superfamily protein
Sequence

TATCTTTGATGAAAGCATTGGCGTACCAACCGGAGGCGACGACGATGACGATGACTATGC
GGGTCTTCCAATTCCCATCAAGAGACAATAAAGCAGGAGCAGGATCATTGCTAATTCTTT
TCTGAATTTCACACAGGTTATAAAAACTCTTCAAATGAGGCTGCTGCCGGATTCACCACT
ACTGCTGTGCGTTGTGCTCGTCTTCACTGCGATTCCATCTGAGCAAGATTCTTCTGGTGT
GCTCGGAACAAGCCAAAGCCAAGCAGGTGGCAGCAACGCTCTTCCCGCCGCCGGTTGCCC
TAGAAGCTGTGGCAACCTCACCTTCGACTACCCATTCGGCATCGGCTCCAACTGTTCTAG
GTCTCCCGCCTTCAGCCTCACCTGCGACAGCACCACGCAAACCCCCAGGCTCTACTTTGA
GGACGACAGCATCACGGAGGTCGTTGCTTATGGAAGCACCTGGTTGCAGATCAGCCTTTC
CCAGGCCATTCCCATCATGCATGGTGGTGTCGTCAGCACTTACAACATGTCGTGGAAGTC
TTCTGGAAGCGGCTTCACCCTATTCTATGCGAACCTGAACATCACAGGCTGCGACTTCGA
TATATACCAACTGCAGGATAGGCATGCGTCGTCCGTGAAGCTCTGCACAGTCACCTGTCC
TGATGCAGGGATCACGGACAAGGTGGCCAGGCAGAACTGCAATGGAACAGGGTGTTGCTC
CGTCAACTTGGATGTTCTTGAAGCCTTCCAGCTACAGTTTGTCCTCCGCAGCCACGGCAG
AGCTCGACTTGGCACGCACACTAGCCGAAGCTCCCTATGGGATAGCATCAATGTAACTTC
CACCGATGCAGAAATCCTGTGGAGTATTGTGGATCAACCGACGTGCGCCAGCGCCATGGA
TGACAGTGCAAACTATGCCTGTGTAAGTAACCATAGCAACTGCTATGATGGCTTGGGTGG
GAGATTAGATCTTGGATATATCTGCAGATGCGATGGTGGTTATAGGGGCAATCCATATGT
ACCCAATGGCTGCTCACGGGATAAAGGATATAATCCTAAGGAACAAAAGGAGAACTGCCA
GCGATCATGCGGTAACATCAGTGTCCCGTTCCCTTTTGGCTTAGAAGAAGGTTGCTTCGC
AAGAAGGCTATTTCAGCTCAACTGCACAAATACAGCGTCTTCCAGTCTCCAGTTCGATGA
CGAACATCAAGTGACACGCATACATATCAATGAGGGGCTTGTGGACATTAAATACACCCC
ACTTTACGAACAGGAGATGTTTAGGGTGTATGTATCTAATGAACCTGGCCTGTACATTGG
CTCTGGGGAATCGTCCTCTGTGCAATGGGCTGTTGCCAATCTGACCTGCCACGAAGCAAT
GCAGAACAAGTCGGGATATGCATGTGTAAGCATCAGTAGCACATGTTTGGGTGTCAACTC
AACAGATGATTACATTGGCTATCGATGCAAATGTCTGCACGGATTTCAGGGGAATCCATA
CATACACAATGGATGCCAAGCTTTACCAATTAATGGGGAAAGTACGAAAAAGCAAAATCT
TCTATTAGGTATTGTGATTGGGCTTAGCAGTGGCATCGGGATTTTACTTCTCGGCTTATG
TGCAACAGTGCTTCTTCGCAAATGGAAAAGGGACATCAAAAAGCAGCAACGAAAAAAATA
TTTTCAGAAAAATAAAGGCCTTCTCTTGGAACAACTGATATCATCCGATGAAAATGCAAG
TGAAAAAACAAAGATTTTCACTTTGGAAGACCTGGAAAAGGCAACAAACAATTTTGATCC
TACACGAATCATTGGCCATGGAGGCCATGGCATGGTGTATAAGGGTATCTTATCTGACCA
GCGTGTGGTGGCAATAAAAAGGTCTAAGAACATTGAGGAAGGTGAGATCAGTCAATTCAT
TAATGAGGTAGCAATTCTCTCTCAAATAAATCATAGAAATATAGTGAAGCTTTTTGGGTG
TTGTCTTGAAACTGAGGTCCCACTGTTGGTGTATGACTTCATTTCAAATGGATCATTGTT
CGAAATTCTACATTCTAGTTCAAGCAGTGGTTTCTCATTGTCATGGGATGACTGCTTAAG
AATAGCTGCAGAAGCTGCAGGGGCTCTCTATTATCTACACTCAGCAGCTTCAGTATCAAT
CTTCCATCGAGATGTGAAGTCCTCTAACATACTACTAGATTCAAACTATACTGCAAAAGT
TTCAGATTTTGGTGCTTCTAGATTGGTTCCTATTGACCAAACTCATGTTGTCACAAATAT
CCAAGGTACATTTGGGTACTTAGACCCAGAGTATTACCATACTGGACAGCTAAATGATAA
GAGTGATGTATATAGTTTCGGTGTTGTGCTTGTGGAACTACTCCTGAGAAGGGAGCCTAT
CATTACAAGTGAGACAGGGTCAAAGCAGAACTTATCTAATTACTTTCTTTGGGAGATGAA
GACAAGGCCAACAAAAGAGATAGTGGCTACTCAGGTTTGTGAGGAAGCAACCGAGGAAGA
GATTAATAGCATTGCCTCGCTTGCAGAGATGTGTTTGAGACTCAACAGTGGGGAGAGACC
TACTATGAAGCAAGTCGAGATGAATTTGCAGCTCTTGAGAACAAAACGGTCAAATTCATG
CCATGTTGTTCAAGATAATGCTGAAGAGATACAACCATTGCTTTGTACAGGAGCTGAATC
TAGATACGAGACGTTTTCTATTACCTTGGGTGGTAGTTCTAATGCAGAGTCTCAATACAG
CCAAAGATTCAATAGCTTGGAGCACGATTTTAAATCATCTCTTGGGACGCCACACTAAGG
GCCTCTTTGAAGTGTCTGAATTCCACTACAACATAAAGAGCAAAAGAAGCTTTTATGAGG
TGGATATTTATTTTCCTGCAACTGCAAGTCCTACCAAAATACTGTGTTGTAACCAGGCAT
GAACCTGAACATCTTAATGTGATCTATCTTTCTATCCGCAGAATATCATGAACAGTCCTT
TACTCTCTTGTTTTTTTTCTACATTATTATCATACAGAAGTATGTTGTACTTATTTCCCT
GCAAATTGGACTCACTATTATGTATTGTTTGTAACTGGATTCTTGAAGTTCATACATCAG
ATGTACACATCTAAATTTTTATATCACCTTGGAACTAGATAAATTAAATTATTTAT