Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041857_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:141369578:141375776:-1 gene:Zm00001d041857 gene_biotype:protein_coding transcript_biotype:protein_coding description:XS domain protein
Sequence	ATGCGACACGGAGGCGGAGGCAGGGGAGGTGGAGGTAAAAGAGGTCGAGGAAGAGGAGCG GGCTCCGGACGCAGAGACGCGCGCCCCGGCAACGATTCGTACCGCGGCGACCGTGGTAGG CGCCACGACTACCGCTCCCGCCGCACCGCTTCCCCGGACCACCGCCCACGCCGCCCGAGG GGCGAGGACAACGACCGCGATCCGCCCCGCGGCGGTCGCATCGGCTACGGCGACCGTAGC CCTCCCCGCGGCGGCCGCACCGGCTACGGCGACCGTAGCCCTCCCGGCGGCGGCCGCACC GGCTACGGCGACCGTAGCCCTCCCGGCGGCGGCCGCACCGGCTACGGCGACCGTAGCCCT CCCGGCGGCGGCCGCACCGGCTACGGCGACCATAGCCCTCCCCGCGGCAGCCGCATCGGC TACGGCGACCGCAGCCCGCCCCGCGGCGACCGCATTGGCTACGGCGACCGCAGCCCGCCC CGCGGCGACCGCATTGGCTACGGCGACCGTAGCCCGCCCCGTATCGGCCGCATCCGCATC GGCTACGGCAACCGCAGCCCGCCCCGGCGCGAGCGCGCTGGCTACGGCCACCTTGACGCG TCGCCCCGCCGCGGGCATGCGCCGTACAAGGACGCCTTCGGCTCGCCGGGCGGCGACCGC CACGCTTCTCCCCGCGGGCGCAGGGAATACGGAGATAGCCGCGTCTCGCCCCCCGGGGGT AGGGACTACGAAAGGGCGCCCTGCCGCGAGGAGCGCGACCGGTACGGCCGCCCTGGCCGC GGTGCCGATCTCGGGCACAACTCCCCGCCAGCCCACATGCTCCCAGACCACCCGTCCGAC CTGGGACGTTCAGCATCCCTACGCGCTGACGACCATAGCCTTCTCAAGGACGACTACCCT AGGGGAGGCCCTCATCGGAGCATCAGAAAGGAGAACGAGTTGTTTGCGAACGGTGACCTG ACTCTCAGAATAAGTGCAACTGAAATGGGAAGGACTAGCGCCATGTACTCCCAAGACCGC AGGCTCTCACCTCCACCACCTATTTATCCCTATGTGCCACGTGAGACGGGATTCTTGACA GGCGGATCTGCCATGAAGGCCAGTGATGGTTATGGTGCTGGAACTGGAAGCGCCCAGCGG CTGCATGATGATGACGATTTTAAGTACCACAAGGATGCCCCACACATTGAGAGGAGTAGA GATATTGATAGGCATTATTCTGGCAGTAGGGACTTAGTTGTTGAGAAAGGTGGAGTTGCT GAAAGGTATGCTTCTGCTGATGATCTGCCTTCTGGGAGGATTCGAGAAACAGAGAGTCTT TACTCTAGTAGAGGTATGCTGGAGTCTGACCTGGTGCCGTGTAGGCAGTTGAAGGTTCTT GGTGATCCTTCCTCAGCTTTGCCTGCCAAGGACCACCATCCATACAGGATGTACACTGAA CCTGGCTACGAGACAAGCAACAGATACATCATGGAGGGCCTTGGCAGGTCATCTCATGAC TCACTGGGGCATGGGAGTGACCATCCTCATAGGTTTTCAGGAGGTTCATTAGAGCATGTA AGCGGTCATGGTGATGAAACATTATTGGATATTGCAAGGCAGGCACACTCTAAGCATACA CCAAGAGCTGCATCATTGGAGTACGATGTACATGATACGCATAGTGAACCAGAGAACTTA CGTGGGAATGTCTCAATGACTTCAAGGCACACATCTGTCTCAACATCTTTGAGAGGTCTT AGGGATGAAAGGATTAACGACAATCTGAGGTTATCCCGTAGGATTGAAGAAGATGAGGGT AGCATTGAATCCATGCATCAGGACACAGAGCACTTAATTCGTCATTGTTACAACGGTGAC GCTTCTGTACAGTACCAAACAGCAAGGGGTGGTGATGATCACTATTCCCACTCCCCTGGA ACTGAACCTATTGGAATTGCAAGGCGGCTAGCTCATCAACATGAGTTTGATTCCTTTGGT TACTCAAGTGATCAAGAAGCTTCCCTTATGGTTTCTAGGAAAAGATGCAGGAGTCCTGAA TATCATGATCATGAGATTGATATGTATCAAGCTGATCATGGGTTTGCAGGACATGAGCAC TATGATGATGATGTTGTTGATGAATATGATATACCCCCACCAAGAATGTCACGGTTTGAT GATGAATATGATGAAATACATGATGTGCTAGCTAATCGTGATGTTTTCTCAAGGATTTCT TTGCCACATGAAACCAATCAGGAATGGACTGATATGGATCAGGGGAACCATCCTCATTCT AACATCTTGGGTTACGGGTGTTCAAAACACGTACCTATGCATCAGAGGTTGTCTAAACCC AATTACCACTCACAATTTGGGGAAACTCCCATGCATGGAAGAGGAAGAGGAAGAGGAGGA TTGACTAAAAGTGCCAAAAAGGGACTGAGAACTGCTCCTCATCAGTTGCATGATGGGTAC CCATCAGGTAGAAATGAATTTGTTAGACCAAATAAATTTTCAAAGTCGTCAAAAGATGAA CTTAATGGTTCTGAAGTGAAGCATGAAGATGCTCCAGAGTATGAGGATGTTCCTCTGCAG AAAGATCCACCAGAAGGTTCAGAGGAGTTCAGTAAACAGGTTGATGAAGCCTTTCTTAAG TACACAAAGATATTAAATGAGAGTCCAGCTATGCAGAAGAAATACCGGGAGGCGCCAAAA GGATCTTTGCCATGCTGTGTCTGTGGCAGTGTAGCGAGGAAATTTCTGGACCTTGATGCA TTGCTATCACATGCTTATGATACATGCAAGGCCGGTTTGAAGACAAAACACTTGGGGTTT CACAAAGCACTGTGTGTTCTGATGGGGTGGAATTGGCATGTTGCTCCAGACACATCTAAA TCACATCACTCCATTCCATCTGAGGAAGTAAATGCCATGAGGGGAGACCTCATGCTGTGG CCTCCAGTTGTTGTGATACATAACAGCTCGACTGGTCATGAGGCAAAGGATACTGATGCA AAGATTGTGTCCATAGAAGAAATCGAAGGTGTATTGGCAGATATTGGGGTAGCGCATGAG AAGGCTAGGGTTAGCCATGGAAGATCAGCCAATCAGAGCGTGTTCCTGGTGAAGTTCCAG CCAACAATATCTGGGTTCCAAGAAGCCATGAGAGTGCATACCCATTTCTCCACCAGAAAC CATGGCAAGGAAGAGTTCCAGCTGATGAAAGGCAGCAAAGGTAAGAAGGCTGCCTCCACT GATAGCCTGGAAGAGCTGCTGTATGCGCATATTGGGGTCGTGGAAGACCTGGGGCTGCTG GATGAGGGAACAAAGAAGAGATGCAAGGTCATGAGGAAGAAGGAAATTGAGGCAAATGCA GAGGCAACACTGAATTTAGAAGTTTATTAG

Peptide Sequence

PEP ID	Zm00001d041857_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:141369578:141375776:-1 gene:Zm00001d041857 transcript:Zm00001d041857_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:XS domain protein
Sequence	MRHGGGGRGGGGKRGRGRGAGSGRRDARPGNDSYRGDRGRRHDYRSRRTASPDHRPRRPR GEDNDRDPPRGGRIGYGDRSPPRGGRTGYGDRSPPGGGRTGYGDRSPPGGGRTGYGDRSP PGGGRTGYGDHSPPRGSRIGYGDRSPPRGDRIGYGDRSPPRGDRIGYGDRSPPRIGRIRI GYGNRSPPRRERAGYGHLDASPRRGHAPYKDAFGSPGGDRHASPRGRREYGDSRVSPPGG RDYERAPCREERDRYGRPGRGADLGHNSPPAHMLPDHPSDLGRSASLRADDHSLLKDDYP RGGPHRSIRKENELFANGDLTLRISATEMGRTSAMYSQDRRLSPPPPIYPYVPRETGFLT GGSAMKASDGYGAGTGSAQRLHDDDDFKYHKDAPHIERSRDIDRHYSGSRDLVVEKGGVA ERYASADDLPSGRIRETESLYSSRGMLESDLVPCRQLKVLGDPSSALPAKDHHPYRMYTE PGYETSNRYIMEGLGRSSHDSLGHGSDHPHRFSGGSLEHVSGHGDETLLDIARQAHSKHT PRAASLEYDVHDTHSEPENLRGNVSMTSRHTSVSTSLRGLRDERINDNLRLSRRIEEDEG SIESMHQDTEHLIRHCYNGDASVQYQTARGGDDHYSHSPGTEPIGIARRLAHQHEFDSFG YSSDQEASLMVSRKRCRSPEYHDHEIDMYQADHGFAGHEHYDDDVVDEYDIPPPRMSRFD DEYDEIHDVLANRDVFSRISLPHETNQEWTDMDQGNHPHSNILGYGCSKHVPMHQRLSKP NYHSQFGETPMHGRGRGRGGLTKSAKKGLRTAPHQLHDGYPSGRNEFVRPNKFSKSSKDE LNGSEVKHEDAPEYEDVPLQKDPPEGSEEFSKQVDEAFLKYTKILNESPAMQKKYREAPK GSLPCCVCGSVARKFLDLDALLSHAYDTCKAGLKTKHLGFHKALCVLMGWNWHVAPDTSK SHHSIPSEEVNAMRGDLMLWPPVVVIHNSSTGHEAKDTDAKIVSIEEIEGVLADIGVAHE KARVSHGRSANQSVFLVKFQPTISGFQEAMRVHTHFSTRNHGKEEFQLMKGSKGKKAAST DSLEELLYAHIGVVEDLGLLDEGTKKRCKVMRKKEIEANAEATLNLEVY

Transcript Sequence

Transcript ID	Zm00001d041857_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:141369578:141375776:-1 gene:Zm00001d041857 gene_biotype:protein_coding transcript_biotype:protein_coding description:XS domain protein
Sequence	ATGCGACACGGAGGCGGAGGCAGGGGAGGTGGAGGTAAAAGAGGTCGAGGAAGAGGAGCG GGCTCCGGACGCAGAGACGCGCGCCCCGGCAACGATTCGTACCGCGGCGACCGTGGTAGG CGCCACGACTACCGCTCCCGCCGCACCGCTTCCCCGGACCACCGCCCACGCCGCCCGAGG GGCGAGGACAACGACCGCGATCCGCCCCGCGGCGGTCGCATCGGCTACGGCGACCGTAGC CCTCCCCGCGGCGGCCGCACCGGCTACGGCGACCGTAGCCCTCCCGGCGGCGGCCGCACC GGCTACGGCGACCGTAGCCCTCCCGGCGGCGGCCGCACCGGCTACGGCGACCGTAGCCCT CCCGGCGGCGGCCGCACCGGCTACGGCGACCATAGCCCTCCCCGCGGCAGCCGCATCGGC TACGGCGACCGCAGCCCGCCCCGCGGCGACCGCATTGGCTACGGCGACCGCAGCCCGCCC CGCGGCGACCGCATTGGCTACGGCGACCGTAGCCCGCCCCGTATCGGCCGCATCCGCATC GGCTACGGCAACCGCAGCCCGCCCCGGCGCGAGCGCGCTGGCTACGGCCACCTTGACGCG TCGCCCCGCCGCGGGCATGCGCCGTACAAGGACGCCTTCGGCTCGCCGGGCGGCGACCGC CACGCTTCTCCCCGCGGGCGCAGGGAATACGGAGATAGCCGCGTCTCGCCCCCCGGGGGT AGGGACTACGAAAGGGCGCCCTGCCGCGAGGAGCGCGACCGGTACGGCCGCCCTGGCCGC GGTGCCGATCTCGGGCACAACTCCCCGCCAGCCCACATGCTCCCAGACCACCCGTCCGAC CTGGGACGTTCAGCATCCCTACGCGCTGACGACCATAGCCTTCTCAAGGACGACTACCCT AGGGGAGGCCCTCATCGGAGCATCAGAAAGGAGAACGAGTTGTTTGCGAACGGTGACCTG ACTCTCAGAATAAGTGCAACTGAAATGGGAAGGACTAGCGCCATGTACTCCCAAGACCGC AGGCTCTCACCTCCACCACCTATTTATCCCTATGTGCCACGTGAGACGGGATTCTTGACA GGCGGATCTGCCATGAAGGCCAGTGATGGTTATGGTGCTGGAACTGGAAGCGCCCAGCGG CTGCATGATGATGACGATTTTAAGTACCACAAGGATGCCCCACACATTGAGAGGAGTAGA GATATTGATAGGCATTATTCTGGCAGTAGGGACTTAGTTGTTGAGAAAGGTGGAGTTGCT GAAAGGTATGCTTCTGCTGATGATCTGCCTTCTGGGAGGATTCGAGAAACAGAGAGTCTT TACTCTAGTAGAGGTATGCTGGAGTCTGACCTGGTGCCGTGTAGGCAGTTGAAGGTTCTT GGTGATCCTTCCTCAGCTTTGCCTGCCAAGGACCACCATCCATACAGGATGTACACTGAA CCTGGCTACGAGACAAGCAACAGATACATCATGGAGGGCCTTGGCAGGTCATCTCATGAC TCACTGGGGCATGGGAGTGACCATCCTCATAGGTTTTCAGGAGGTTCATTAGAGCATGTA AGCGGTCATGGTGATGAAACATTATTGGATATTGCAAGGCAGGCACACTCTAAGCATACA CCAAGAGCTGCATCATTGGAGTACGATGTACATGATACGCATAGTGAACCAGAGAACTTA CGTGGGAATGTCTCAATGACTTCAAGGCACACATCTGTCTCAACATCTTTGAGAGGTCTT AGGGATGAAAGGATTAACGACAATCTGAGGTTATCCCGTAGGATTGAAGAAGATGAGGGT AGCATTGAATCCATGCATCAGGACACAGAGCACTTAATTCGTCATTGTTACAACGGTGAC GCTTCTGTACAGTACCAAACAGCAAGGGGTGGTGATGATCACTATTCCCACTCCCCTGGA ACTGAACCTATTGGAATTGCAAGGCGGCTAGCTCATCAACATGAGTTTGATTCCTTTGGT TACTCAAGTGATCAAGAAGCTTCCCTTATGGTTTCTAGGAAAAGATGCAGGAGTCCTGAA TATCATGATCATGAGATTGATATGTATCAAGCTGATCATGGGTTTGCAGGACATGAGCAC TATGATGATGATGTTGTTGATGAATATGATATACCCCCACCAAGAATGTCACGGTTTGAT GATGAATATGATGAAATACATGATGTGCTAGCTAATCGTGATGTTTTCTCAAGGATTTCT TTGCCACATGAAACCAATCAGGAATGGACTGATATGGATCAGGGGAACCATCCTCATTCT AACATCTTGGGTTACGGGTGTTCAAAACACGTACCTATGCATCAGAGGTTGTCTAAACCC AATTACCACTCACAATTTGGGGAAACTCCCATGCATGGAAGAGGAAGAGGAAGAGGAGGA TTGACTAAAAGTGCCAAAAAGGGACTGAGAACTGCTCCTCATCAGTTGCATGATGGGTAC CCATCAGGTAGAAATGAATTTGTTAGACCAAATAAATTTTCAAAGTCGTCAAAAGATGAA CTTAATGGTTCTGAAGTGAAGCATGAAGATGCTCCAGAGTATGAGGATGTTCCTCTGCAG AAAGATCCACCAGAAGGTTCAGAGGAGTTCAGTAAACAGGTTGATGAAGCCTTTCTTAAG TACACAAAGATATTAAATGAGAGTCCAGCTATGCAGAAGAAATACCGGGAGGCGCCAAAA GGATCTTTGCCATGCTGTGTCTGTGGCAGTGTAGCGAGGAAATTTCTGGACCTTGATGCA TTGCTATCACATGCTTATGATACATGCAAGGCCGGTTTGAAGACAAAACACTTGGGGTTT CACAAAGCACTGTGTGTTCTGATGGGGTGGAATTGGCATGTTGCTCCAGACACATCTAAA TCACATCACTCCATTCCATCTGAGGAAGTAAATGCCATGAGGGGAGACCTCATGCTGTGG CCTCCAGTTGTTGTGATACATAACAGCTCGACTGGTCATGAGGCAAAGGATACTGATGCA AAGATTGTGTCCATAGAAGAAATCGAAGGTGTATTGGCAGATATTGGGGTAGCGCATGAG AAGGCTAGGGTTAGCCATGGAAGATCAGCCAATCAGAGCGTGTTCCTGGTGAAGTTCCAG CCAACAATATCTGGGTTCCAAGAAGCCATGAGAGTGCATACCCATTTCTCCACCAGAAAC CATGGCAAGGAAGAGTTCCAGCTGATGAAAGGCAGCAAAGGTAAGAAGGCTGCCTCCACT GATAGCCTGGAAGAGCTGCTGTATGCGCATATTGGGGTCGTGGAAGACCTGGGGCTGCTG GATGAGGGAACAAAGAAGAGATGCAAGGTCATGAGGAAGAAGGAAATTGAGGCAAATGCA GAGGCAACACTGAATTTAGAAGTTTATTAGGTCTAGTACTAGGATCCGAACCATTTGAAG TGGTCCTCTTTTGCTTCATCTTGCAGCTGCTTGCTTGTCCTTGCGGCTGTAACGTCAAAA GAAGAAAAGAAGTGTAAATTCTGCTTTTGCCATTAAAGAGTGACGAAACTCAGTTGGCTT CTGTCTGCTGGGGAAGGCCTGCCTCGGTTTGCATGGCATGGCAAGGACATAATTTTGTGG CTAGATGGGGACACCTTAACGGCAAAAGCAGAATTACCTGGTCGAAGAACCGAGTTTAAT CTTTATATTATGGAATCCCTTCTTTTTTTAAGTCTTTTGCTGCGTGAAGTTATGCATAA