Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041854_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:3:141168658:141176350:1 gene:Zm00001d041854 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein-tyrosine-phosphatase PTP1
Sequence	ATGTTGATGAGGGCCGCCGCTGCCCTCCCTCGCCGATCGTCGCGGCCCTCGGAGCCGGGG TCCTCCTCCTCCCGGGCTCCCGCCCCTGGGGCCTCCTCCAGCCGGGCTCCTGCCCCTGGG GCCTCCTTCGACCCCTTCGATGTCGATACCGACCCGCCATCACGGCCTGAGCTGACGCCC GAGCAGATCGGGCTTTGCGTCGACGCGCTCGCGCATTTCGAGTACAAGGGGAAGCGCCGG GATGACTTGTCCGACGAGTTCAGAAGCCTCTCGGTATCGGATATTAGACATATGAAAACG ATCAGTGTAGCTCATTATCCTGTTAATAGAGAGAAGAACCGATATATTGATGTCTTACCA TTTGACGATACCAGAGTACAGCTAAAATCCTCAGCACGGCCTCCAAACAACGATTACATC AATGCAAGCTTTATAAAGGCTACTGAGAACAACAGAGTTGCAACATTTATTTCTACACAA GGTCCACTAGTGAAGACATTTGGAGATTTTTGGGAAATGGTCTTTGAATATCAGTGCCCT GCAATTGTCATGCTCACCCACTTTGACAGTATTAAGTGTGATAAATATCTTCCACTGGGA AGTGAACGGCGAACATATGGGGATTATGATATCAAGATTACAAAGACAAGAACAGATAGC CACCATTTACAGTTGCGTGATGTCAAGGTGCAAAACATCGAGACAGGCAAGGTTCATTCT GTACTCCATATAGAATATCCTGATTGGCCCGACCATGGAGTGGCAACTAATACAGATGCT GTACGGGAAATCTGGAAACGACTGCATCACATTCCAACGGAACATCCTATAGTTATCCAT TGCAGTGCAGGAATCGGAAGGACCGGTACTTACATCACAATCCATACTACAATTGAGCGA ATTCTTCTTGGAGATAAAAGCTCTTACGATCTTGCCAAAACTGTAAAGAATTTTAGATCC CAACGACCTGGGATGGTCCAAACAGAAGAACAATACAAGTTCTGCTACAGGGCAATTGCT GACGAGCTGAAAGACCTGCTAAATTCAGATCATTGA

Peptide Sequence

PEP ID	Zm00001d041854_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:3:141168658:141176350:1 gene:Zm00001d041854 transcript:Zm00001d041854_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein-tyrosine-phosphatase PTP1
Sequence	MLMRAAAALPRRSSRPSEPGSSSSRAPAPGASSSRAPAPGASFDPFDVDTDPPSRPELTP EQIGLCVDALAHFEYKGKRRDDLSDEFRSLSVSDIRHMKTISVAHYPVNREKNRYIDVLP FDDTRVQLKSSARPPNNDYINASFIKATENNRVATFISTQGPLVKTFGDFWEMVFEYQCP AIVMLTHFDSIKCDKYLPLGSERRTYGDYDIKITKTRTDSHHLQLRDVKVQNIETGKVHS VLHIEYPDWPDHGVATNTDAVREIWKRLHHIPTEHPIVIHCSAGIGRTGTYITIHTTIER ILLGDKSSYDLAKTVKNFRSQRPGMVQTEEQYKFCYRAIADELKDLLNSDH

Transcript Sequence

Transcript ID	Zm00001d041854_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:141168658:141176350:1 gene:Zm00001d041854 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein-tyrosine-phosphatase PTP1
Sequence	AAAAAAACCGTAATAGCAAAAACGACTCCACACGGTCCACGGCGTCTTCTCCGGCGAACC TTCGCGAGCCCTCGGCTCCCCTCTACCACCGCTGCCGCGACCCCGCCTCCGGAGCATCCT CGGGTAGCGCTCTGGCTTCCCGTGCCGCCGGACGTCCTGCAGGAGGCGGCGGCCTCCGTG GCATGTTGATGAGGGCCGCCGCTGCCCTCCCTCGCCGATCGTCGCGGCCCTCGGAGCCGG GGTCCTCCTCCTCCCGGGCTCCCGCCCCTGGGGCCTCCTCCAGCCGGGCTCCTGCCCCTG GGGCCTCCTTCGACCCCTTCGATGTCGATACCGACCCGCCATCACGGCCTGAGCTGACGC CCGAGCAGATCGGGCTTTGCGTCGACGCGCTCGCGCATTTCGAGTACAAGGGGAAGCGCC GGGATGACTTGTCCGACGAGTTCAGAAGCCTCTCGGTATCGGATATTAGACATATGAAAA CGATCAGTGTAGCTCATTATCCTGTTAATAGAGAGAAGAACCGATATATTGATGTCTTAC CATTTGACGATACCAGAGTACAGCTAAAATCCTCAGCACGGCCTCCAAACAACGATTACA TCAATGCAAGCTTTATAAAGGCTACTGAGAACAACAGAGTTGCAACATTTATTTCTACAC AAGGTCCACTAGTGAAGACATTTGGAGATTTTTGGGAAATGGTCTTTGAATATCAGTGCC CTGCAATTGTCATGCTCACCCACTTTGACAGTATTAAGTGTGATAAATATCTTCCACTGG GAAGTGAACGGCGAACATATGGGGATTATGATATCAAGATTACAAAGACAAGAACAGATA GCCACCATTTACAGTTGCGTGATGTCAAGGTGCAAAACATCGAGACAGGCAAGGTTCATT CTGTACTCCATATAGAATATCCTGATTGGCCCGACCATGGAGTGGCAACTAATACAGATG CTGTACGGGAAATCTGGAAACGACTGCATCACATTCCAACGGAACATCCTATAGTTATCC ATTGCAGTGCAGGAATCGGAAGGACCGGTACTTACATCACAATCCATACTACAATTGAGC GAATTCTTCTTGGAGATAAAAGCTCTTACGATCTTGCCAAAACTGTAAAGAATTTTAGAT CCCAACGACCTGGGATGGTCCAAACAGAAGAACAATACAAGTTCTGCTACAGGGCAATTG CTGACGAGCTGAAAGACCTGCTAAATTCAGATCATTGAGGTGGGTCACATGAGACGGACA GCAACGCTGTTAGCATTTATTACGTTTTTTTAGACATTTCTATGTGAAGGAACACTTACC CTTTAGAGGAGTGAATTAGTCAATCTCATTTCTCTTTAAACTACTGAGCTATGTTTGTTC TAGTCAAAATCTATGTAATAAAAAATCTATCATATGTGAAGCTATGCTATGTTTTTGACT AATCGTTGCTATTACTACCGTAAAGGAGTACGAT