Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041833_T015
CDS Infomation	cds chromosome:B73_RefGen_v4:3:139768064:139776009:1 gene:Zm00001d041833 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase
Sequence	ATGACCGACAGAAACCCCGCCGCCGCCTCAAGCAAGCGTCACTGTGACCTCTCCCTCGAC GATCCCACGCCGTCGGCCAAGCTCCAGCGGTGCTCCGAGCCGTCAGAACCAACGCCGGCG GGGAAACCGAACGGCGGCGCGGCGACGGGAGAGGAGAGCGAGATGATGGCCGGCGCACGG AACCCTAGGGCGCAGAGGTACCTGGTCGCCGTGGAGTACATTGGCACCCGCTTCTCCGGC TCACAGAAGCAGCCCAACCAGCGCACCGTCACTGGGGTCCTCGAGGAGGCATTTCACCGA TTTATTGGGCAGCCAGTTTCAATAATCTTTTCTAGCCGAACGGATGCAGGTGTTCATGCT TTATCAAATGTTTGTCATGTTGATGTTGAGCGGATAAGTAAAAGGAAGCCTGGCGAAGTT TTAACACCTCATGAGCCTGGAGTTGTAAAACGTGCTGTGAACCACTTTCTACTGAAGAGT GAAGGTGACATAATGGTGACTGATGTCTGCTGTGTTGCACCAGATTTTCATGCTAGATAC AAATCTCTAGAGCGCACATATCACTATCGCTTGCTTGCTGGACCTGAATCAACATCTGTT TTTGAGAAAAACTCTGTTTGGCATATATCTGAAGATTTGGATATTCAGTCAATGAAGAAA GCATGCAGCATACTTGTTGGGCATCATGATTTCAGTTCATTTCGAGCGGCTGGATGTCAG GCAAACTCTCCAGTGCGAACTCTGGATGAACTTAGTGTTACAGAAGTATTCCCTTTCATG TTTTTTCCTTCAAGTGTAGAAAGATCAGAGTTGGAATTATCAAATGTCTCTCTTGTTTAT TCAAGGAAACCAGACATGGAATCTTCTGGGAAAGGATCTGATGGTTCCTGTACCAGTAGT GTGAAATCAGATTTTGAGAATGGAAAAGATTTTGGAAAGCGGTCAAGGCACCGTTGCTTT GTTGTTACTGCAAGGGCACGGTCTTTTCTTTACCACCAGGTAAGGTTGATGGTCGGTCTT CTAAAATCTGTTGGGACTGGAGATCTAACAACTGCAGATGTTGAGAGAATTCTGGATGCA AAGACGGTTACTGCTGCACCCAGTATGGCACCTTCTTGTGGTCTGTACCTTGCTAACGTT AAATATGATCTGAATACCTGA

Peptide Sequence

PEP ID	Zm00001d041833_P015
PEP Infomation	pep chromosome:B73_RefGen_v4:3:139768064:139776009:1 gene:Zm00001d041833 transcript:Zm00001d041833_T015 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase
Sequence	MTDRNPAAASSKRHCDLSLDDPTPSAKLQRCSEPSEPTPAGKPNGGAATGEESEMMAGAR NPRAQRYLVAVEYIGTRFSGSQKQPNQRTVTGVLEEAFHRFIGQPVSIIFSSRTDAGVHA LSNVCHVDVERISKRKPGEVLTPHEPGVVKRAVNHFLLKSEGDIMVTDVCCVAPDFHARY KSLERTYHYRLLAGPESTSVFEKNSVWHISEDLDIQSMKKACSILVGHHDFSSFRAAGCQ ANSPVRTLDELSVTEVFPFMFFPSSVERSELELSNVSLVYSRKPDMESSGKGSDGSCTSS VKSDFENGKDFGKRSRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTADVERILDA KTVTAAPSMAPSCGLYLANVKYDLNT

Transcript Sequence

Transcript ID	Zm00001d041833_T015
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:139768064:139776009:1 gene:Zm00001d041833 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase
Sequence	AAATCACTTCTTCCCGGACTCCCAGACTCCTCCCAAAACCCTCGCATCCTCTCCCACGCA TGTCACAATCGCCATGACCGACAGAAACCCCGCCGCCGCCTCAAGCAAGCGTCACTGTGA CCTCTCCCTCGACGATCCCACGCCGTCGGCCAAGCTCCAGCGGTGCTCCGAGCCGTCAGA ACCAACGCCGGCGGGGAAACCGAACGGCGGCGCGGCGACGGGAGAGGAGAGCGAGATGAT GGCCGGCGCACGGAACCCTAGGGCGCAGAGGTACCTGGTCGCCGTGGAGTACATTGGCAC CCGCTTCTCCGGCTCACAGAAGCAGCCCAACCAGCGCACCGTCACTGGGGTCCTCGAGGA GGCATTTCACCGATTTATTGGGCAGCCAGTTTCAATAATCTTTTCTAGCCGAACGGATGC AGGTGTTCATGCTTTATCAAATGTTTGTCATGTTGATGTTGAGCGGATAAGTAAAAGGAA GCCTGGCGAAGTTTTAACACCTCATGAGCCTGGAGTTGTAAAACGTGCTGTGAACCACTT TCTACTGAAGAGTGAAGGTGACATAATGGTGACTGATGTCTGCTGTGTTGCACCAGATTT TCATGCTAGATACAAATCTCTAGAGCGCACATATCACTATCGCTTGCTTGCTGGACCTGA ATCAACATCTGTTTTTGAGAAAAACTCTGTTTGGCATATATCTGAAGATTTGGATATTCA GTCAATGAAGAAAGCATGCAGCATACTTGTTGGGCATCATGATTTCAGTTCATTTCGAGC GGCTGGATGTCAGGCAAACTCTCCAGTGCGAACTCTGGATGAACTTAGTGTTACAGAAGT ATTCCCTTTCATGTTTTTTCCTTCAAGTGTAGAAAGATCAGAGTTGGAATTATCAAATGT CTCTCTTGTTTATTCAAGGAAACCAGACATGGAATCTTCTGGGAAAGGATCTGATGGTTC CTGTACCAGTAGTGTGAAATCAGATTTTGAGAATGGAAAAGATTTTGGAAAGCGGTCAAG GCACCGTTGCTTTGTTGTTACTGCAAGGGCACGGTCTTTTCTTTACCACCAGGTAAGGTT GATGGTCGGTCTTCTAAAATCTGTTGGGACTGGAGATCTAACAACTGCAGATGTTGAGAG AATTCTGGATGCAAAGACGGTTACTGCTGCACCCAGTATGGCACCTTCTTGTGGTCTGTA CCTTGCTAACGTTAAATATGATCTGAATACCTGAAGACAAGTTTTATCTAGTGGCTTCTG TTGGTGGGCCTCCAGATTTTGTCAGCTGTTGGCTATCAAAGGAATTATATGCTGCCACTT GCCAAAGCTTTCAGTTGCCTGTTTTGTCCACTGAATCTTGCATGGTGATTGAAAACCTAG AATTAAGTTTATCTGTCAGCACAAGAGCCGGCTTCATTCTCTTCTTGTACACAGAGCTCT TCTGCATGTTCAGAAACAAAATAGGTAGCTTCATTTTAGTTAAGTTCAACTATCCACTCT TTAAATTTCAGCTGGATCCACCCGATTTTGTTGGGTGTACGTAGATTTGACCTGGTAGGG GCAAAATTTTATTTCTTGGTTTTCTCATGACTGTACTTGGTTCTTGATATATAATTAATT AG