Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041829_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:3:139490069:139496394:-1 gene:Zm00001d041829 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:thiamine synthesis3 description: thiamine synthesis3
Sequence	ATGACGTCCGTACCGCTACCACCCCTCTCCGCCGCCCTCGCCCAATATCGCCCCTCCGCG GCCGCCACCCTTCGCTTCCGCACCCCCTCTTCCGCGCCCGGCGTTTCGGCTTCTTCGTCT ACCCGGGCGCGCAGGTTCTCGGTTATCGCGTCGGCGCGCGAGATGCCGTGGCCGCACGTG CTGACGGTGGCCGGCTCCGACTCCAGCGCCGGCGCGGGCATCCAGGCGGACATCAAGGCG TGCGCGGCCCTAGGAGCCTACTGCTCCTCCGTAATCACTGCTGTCACCGCGCAGAACACC GTCGGCGTCCAGGGGATCCATGCTGTGCCGGAGAAGTTCGTGGGAGAGCAGCTCAGGTCG GTTCTCTCGGACATGTCGGTGGACGTGGTGAAAACAGGGATGCTCCCTTCAGCTGGAGTA GTCAAAGTTCTGTGTGAGAGTCTTAGGAAGTTTCCAGTCAAAGCTCTAGTGGTGGATCCG GTCATGGTGTCCACCAGCGGTGATACTCTTTCAGGACCATCTACTCTCGCTACATATAGG GATGAACTATTTTCTATGGCTGATATAGTCACTCCAAATGTGAAAGAAGCATCTAAGTTA CTTGGTGATGTATCATTGCATACAATTTCTGACATGTGCAATGCAGCTGAATCCATTTAT AAACTTGGTCCCAAATATGTGCTTGTGAAAGGCGGGGATATGCCAGATTCATCAGATGCA ATTGATGTGTTATTTGATGGTAAGGAGTTCACTGAGCTTCGTGGTCTGCGTATAAAGACC CGTAACACACATGGAACTGGTTGCACATTAGCTTCATGTATTGCTGCTGAATTAGCAAAA GGCGCAACGATGCTGCATGCTGTCCAGGCTGCGAAGAAATTTGTGGAATCTGCTCTTTAT CACAGCAAAGATCTTGTGATTGGAAATGGACCTCAGGGCCCTTTTGACCACCACTTCGAG CTCAAGTCTCCATCATACAAGATGGGATCACTGCAAAAGTTCAATCCAGATGACCTCTTC CTGTACGCAGTGACAGACTCTGGGATGAACAAGAAGTGGGGTCGTTCGATAAAAGATGCC GTGAAAGCTGCCATTGAAGGTGGCGCTACCATTGTCCAACTGAGAGAAAAAGACGCCGAG ACACGGGAGTTCTTGGAAGCTGCCAAGGCCTGTGTGGAAATCTGCAAGTCCAGTGGAGTG CCGCTACTGATCAATGACCGCGTAGATGTTGCTCTGGCATGCGACGCAGATGGCGTCCAC GTTGGCCAATCAGACATGCCAGCATGGGAAGTACGACGGCTCCTAGGACCTGGAAAAATC ATCGGCGTCTCATGTAAAACCCCGGCCCAGGCCGAGCAGGCATGGAAGGATGGCGCAGAC TACATCGGCTGTGGCGGTGTCTTCCCGACCACGACGAAGGCAAACAACCCTACCTTAGGG TTCGAGGGCTTGAGGACTGTGTGCTTAGCTTCGAAGCTACCTGTGGTGGCCATCGGCGGC ATCAATGCTGGAAATGCAGGCTCGGTGATGGAGCTTGGGCTCCCAAATCTGAAAGGTGTG GCTGTGGTCTCTGCTCTGTTTGACCGGGAACGTGTCGCGGCTGAGACAAGAAACCTCAGA TCCATCCTGATGAAGAATGCTTACTCAAGGTCTTAG

Peptide Sequence

PEP ID	Zm00001d041829_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:3:139490069:139496394:-1 gene:Zm00001d041829 transcript:Zm00001d041829_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:thiamine synthesis3 description: thiamine synthesis3
Sequence	MTSVPLPPLSAALAQYRPSAAATLRFRTPSSAPGVSASSSTRARRFSVIASAREMPWPHV LTVAGSDSSAGAGIQADIKACAALGAYCSSVITAVTAQNTVGVQGIHAVPEKFVGEQLRS VLSDMSVDVVKTGMLPSAGVVKVLCESLRKFPVKALVVDPVMVSTSGDTLSGPSTLATYR DELFSMADIVTPNVKEASKLLGDVSLHTISDMCNAAESIYKLGPKYVLVKGGDMPDSSDA IDVLFDGKEFTELRGLRIKTRNTHGTGCTLASCIAAELAKGATMLHAVQAAKKFVESALY HSKDLVIGNGPQGPFDHHFELKSPSYKMGSLQKFNPDDLFLYAVTDSGMNKKWGRSIKDA VKAAIEGGATIVQLREKDAETREFLEAAKACVEICKSSGVPLLINDRVDVALACDADGVH VGQSDMPAWEVRRLLGPGKIIGVSCKTPAQAEQAWKDGADYIGCGGVFPTTTKANNPTLG FEGLRTVCLASKLPVVAIGGINAGNAGSVMELGLPNLKGVAVVSALFDRERVAAETRNLR SILMKNAYSRS

Transcript Sequence

Transcript ID	Zm00001d041829_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:139490069:139496394:-1 gene:Zm00001d041829 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:thiamine synthesis3 description: thiamine synthesis3
Sequence	AAGTCATAAACCTCCACTCGCGGACTTGCCATGACGTCCGTACCGCTACCACCCCTCTCC GCCGCCCTCGCCCAATATCGCCCCTCCGCGGCCGCCACCCTTCGCTTCCGCACCCCCTCT TCCGCGCCCGGCGTTTCGGCTTCTTCGTCTACCCGGGCGCGCAGGTTCTCGGTTATCGCG TCGGCGCGCGAGATGCCGTGGCCGCACGTGCTGACGGTGGCCGGCTCCGACTCCAGCGCC GGCGCGGGCATCCAGGCGGACATCAAGGCGTGCGCGGCCCTAGGAGCCTACTGCTCCTCC GTAATCACTGCTGTCACCGCGCAGAACACCGTCGGCGTCCAGGGGATCCATGCTGTGCCG GAGAAGTTCGTGGGAGAGCAGCTCAGGTCGGTTCTCTCGGACATGTCGGTGGACGTGGTG AAAACAGGGATGCTCCCTTCAGCTGGAGTAGTCAAAGTTCTGTGTGAGAGTCTTAGGAAG TTTCCAGTCAAAGCTCTAGTGGTGGATCCGGTCATGGTGTCCACCAGCGGTGATACTCTT TCAGGACCATCTACTCTCGCTACATATAGGGATGAACTATTTTCTATGGCTGATATAGTC ACTCCAAATGTGAAAGAAGCATCTAAGTTACTTGGTGATGTATCATTGCATACAATTTCT GACATGTGCAATGCAGCTGAATCCATTTATAAACTTGGTCCCAAATATGTGCTTGTGAAA GGCGGGGATATGCCAGATTCATCAGATGCAATTGATGTGTTATTTGATGGTAAGGAGTTC ACTGAGCTTCGTGGTCTGCGTATAAAGACCCGTAACACACATGGAACTGGTTGCACATTA GCTTCATGTATTGCTGCTGAATTAGCAAAAGGCGCAACGATGCTGCATGCTGTCCAGGCT GCGAAGAAATTTGTGGAATCTGCTCTTTATCACAGCAAAGATCTTGTGATTGGAAATGGA CCTCAGGGCCCTTTTGACCACCACTTCGAGCTCAAGTCTCCATCATACAAGATGGGATCA CTGCAAAAGTTCAATCCAGATGACCTCTTCCTGTACGCAGTGACAGACTCTGGGATGAAC AAGAAGTGGGGTCGTTCGATAAAAGATGCCGTGAAAGCTGCCATTGAAGGTGGCGCTACC ATTGTCCAACTGAGAGAAAAAGACGCCGAGACACGGGAGTTCTTGGAAGCTGCCAAGGCC TGTGTGGAAATCTGCAAGTCCAGTGGAGTGCCGCTACTGATCAATGACCGCGTAGATGTT GCTCTGGCATGCGACGCAGATGGCGTCCACGTTGGCCAATCAGACATGCCAGCATGGGAA GTACGACGGCTCCTAGGACCTGGAAAAATCATCGGCGTCTCATGTAAAACCCCGGCCCAG GCCGAGCAGGCATGGAAGGATGGCGCAGACTACATCGGCTGTGGCGGTGTCTTCCCGACC ACGACGAAGGCAAACAACCCTACCTTAGGGTTCGAGGGCTTGAGGACTGTGTGCTTAGCT TCGAAGCTACCTGTGGTGGCCATCGGCGGCATCAATGCTGGAAATGCAGGCTCGGTGATG GAGCTTGGGCTCCCAAATCTGAAAGGTGTGGCTGTGGTCTCTGCTCTGTTTGACCGGGAA CGTGTCGCGGCTGAGACAAGAAACCTCAGATCCATCCTGATGAAGAATGCTTACTCAAGG TCTTAGAGCAAGTTGGGATATGCCGCCTGTTCATTTACTTTCTTTGTTTAGGCCCGAAAT AAGTTTGTAATCAATCACTTTGTCATAAGGAGAAACCAAACAGGCGCTGCAATCTTCAAT AAACCGGAGTCATTATTTCT