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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041778_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:3:137460360:137470245:1 gene:Zm00001d041778 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-2 complex subunit sigma
Sequence

ATGATCCGGTTCATCCTGCTGCAGAACCGGCAGGGGAAAACACGGCTGGCCAAGTACTAT
GTCGCTCTCGAGGACTCCGAGAAGCACAAGGTTGAGTACGAGGTGCATCGGCTCGTGGTC
AACCGGGACCCCAAGTTCACCAACTTCGTCGAGTTCCGCACGCACAAAGTTATATATAGG
AGATATGCAGGACTTTTTTTCTCTATATGTGTGGACATCACCGACAACGAATTGGCATAC
TTGGAATGTATCCATCTGTTTGTTGAGATATTGGACCATTTCTTCAGCAATGTGTGTGAA
CTTGATTTAGTATTTAATTTCCACAAGGTTTACTTGATATTGGATGAGTTCATTCTTGCT
GGAGAGCTTCAAGAAACAAGCAAAAGGCTCCTAGACTTCTCGTTCCAGAATCCAGACTTC
ACTAGTACACCGGCTGACCGGCGACCATCTGTGCGCGCTGTGCGGTTTTAG

Peptide Sequence

PEP ID

Zm00001d041778_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:3:137460360:137470245:1 gene:Zm00001d041778 transcript:Zm00001d041778_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-2 complex subunit sigma
Sequence

MIRFILLQNRQGKTRLAKYYVALEDSEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYR
RYAGLFFSICVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILA
GELQETSKRLLDFSFQNPDFTSTPADRRPSVRAVRF

Transcript Sequence

Transcript ID

Zm00001d041778_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:137460360:137470245:1 gene:Zm00001d041778 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-2 complex subunit sigma
Sequence

GTCCTTCCCAATTCTCAGGCAACCCCGTCGTCTTCCGCCATGATCCGGTTCATCCTGCTG
CAGAACCGGCAGGGGAAAACACGGCTGGCCAAGTACTATGTCGCTCTCGAGGACTCCGAG
AAGCACAAGGTTGAGTACGAGGTGCATCGGCTCGTGGTCAACCGGGACCCCAAGTTCACC
AACTTCGTCGAGTTCCGCACGCACAAAGTTATATATAGGAGATATGCAGGACTTTTTTTC
TCTATATGTGTGGACATCACCGACAACGAATTGGCATACTTGGAATGTATCCATCTGTTT
GTTGAGATATTGGACCATTTCTTCAGCAATGTGTGTGAACTTGATTTAGTATTTAATTTC
CACAAGGTTTACTTGATATTGGATGAGTTCATTCTTGCTGGAGAGCTTCAAGAAACAAGC
AAAAGGCTCCTAGACTTCTCGTTCCAGAATCCAGACTTCACTAGTACACCGGCTGACCGG
CGACCATCTGTGCGCGCTGTGCGGTTTTAGTTCCAGAATCCAGAGTTCCAGACTTCACCG
GCCCAGATTTCTCGTCCAGACACGCGCGAACAACAGGTGGAAGGGGAGCTACAGGTGATG
AATTTCAGTTGGATGAAGATCTTCTTTAGGCAATTATAGAGAGGATGGGCGAGCTTGAGA
AGCTGGAATGAAAAGAAACAATGGTGTAGTGTACATTAGCAATTTAGCATAGGTCCGGAG
CTAGTTCTGCCCAATCGACAAATTACCTCCATATTTTTCACAATTCTTTGTACCTGTTGT
GCATCATCTTTGCTTCACTTAAACCTTTATCAAGCCGTGAATCGGTGTATGTCTTTTTAA
CGTTTCCTGAGGTTACTGAGGGTTTTT